BLASTX nr result

ID: Scutellaria24_contig00005257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005257
         (1917 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containin...   444   e-122
ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containin...   436   e-119
ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containin...   434   e-119
ref|XP_002527651.1| nucleic acid binding protein, putative [Rici...   407   e-111
ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containin...   402   e-109

>ref|XP_002277716.2| PREDICTED: zinc finger CCCH domain-containing protein 12-like [Vitis
            vinifera]
          Length = 372

 Score =  444 bits (1143), Expect = e-122
 Identities = 230/381 (60%), Positives = 266/381 (69%), Gaps = 35/381 (9%)
 Frame = +3

Query: 561  MDYRRENGFSNGNVVQVLSGHPGNGDNENWGSGVGDE-VWATEDDYGMWNGEASGETNPN 737
            MD  RE GFS G+V          G  +NW  G  D+ VWATEDDY +WNG+ SG+T  N
Sbjct: 1    MDNGREAGFS-GSV---------GGGVDNWIPGSSDQLVWATEDDYAVWNGDGSGDTPSN 50

Query: 738  SSYEGRMSQS--GSEPPNKRSRNSQSGDL----------MSSNRAKAIGKMFYKTKLCCK 881
            S+YEGR SQS  GSEPPNK+SRNSQ  D           + SNR+KAIGKMF+KTKLCCK
Sbjct: 51   SNYEGRQSQSRSGSEPPNKKSRNSQVVDSQGNVFGRDRDLPSNRSKAIGKMFFKTKLCCK 110

Query: 882  FRAGTCPYISNCNFAHSVEELRKPPPNWQEIVAAHEEDQAASSEPREEFQIPILGVTD-- 1055
            FRAGTCPY++NCNFAHS++ELR+PPPNWQEIVAAH+E++  SSEPREEFQIP +G +   
Sbjct: 111  FRAGTCPYVTNCNFAHSIQELRRPPPNWQEIVAAHDEERGVSSEPREEFQIPSIGSSSFG 170

Query: 1056 -ETQRSYKGRHCKKFYTEEGCPYGENCTFLHDEQSKARESV------XXXXXXXXXXXXX 1214
             ETQRSYKGRHCKKFYT+EGCPYG+NCTFLHDEQSKARESV                   
Sbjct: 171  VETQRSYKGRHCKKFYTDEGCPYGDNCTFLHDEQSKARESVAISLGPGAGGGGGGGGGGG 230

Query: 1215 XXXXXXXXXXTLKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHQF-GGLDSEVTDS 1391
                       +KPSNWKTRICNKWELTGYCPFGSKCHFAHG  ELH++ GGL  E  DS
Sbjct: 231  GGGGGGGSGSNIKPSNWKTRICNKWELTGYCPFGSKCHFAHGMGELHRYGGGLVDESRDS 290

Query: 1392 T---PDAKQGAVPAKTSVDT---------MVTSVPHSDGYLIGVQSQRLSNATQKTGPRS 1535
            T   PD+KQG VP+K   D          +V SVPHSD Y  GV SQR ++  Q+ G R+
Sbjct: 291  TSAPPDSKQGGVPSKPPSDAVVAFVTSVPLVASVPHSDVYHAGVPSQRPTSVIQRPGQRT 350

Query: 1536 LQKWKGPDKISKIYGDWIDDL 1598
             +KWKGPDKIS+IYGDWIDD+
Sbjct: 351  QKKWKGPDKISRIYGDWIDDI 371


>ref|XP_004136190.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 339

 Score =  436 bits (1121), Expect = e-119
 Identities = 226/353 (64%), Positives = 262/353 (74%), Gaps = 15/353 (4%)
 Frame = +3

Query: 585  FSNGNVVQVLSGHPGNGDNENWGSGVGDEVWATEDDYGMWN--GEASGETNPNSSYEGRM 758
            +S GNVV V+SG      NENW      EVWATED+Y  WN  G+ S +T  NSSY+ R 
Sbjct: 3    YSGGNVVHVISGT----SNENWPG----EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQ 54

Query: 759  SQS--GSEPPNKRSRNSQSGDLMSSNRAKAIGKMFYKTKLCCKFRAGTCPYISNCNFAHS 932
            SQS  GSEPPNK+SR+SQ  D+ SSNR+KAIGKMF+KTKLCCKFRAGTCPYI+NCNFAHS
Sbjct: 55   SQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHS 112

Query: 933  VEELRKPPPNWQEIVAAHEEDQAASSEPREEFQIPILGVTD---ETQRSYKGRHCKKFYT 1103
            +EELR+PP NWQEIVAAHEE++A  SEPREEFQIP LG ++   E+QRSYKGRHCKKFYT
Sbjct: 113  IEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYT 172

Query: 1104 EEGCPYGENCTFLHDEQSKARESVXXXXXXXXXXXXXXXXXXXXXXXTLKPSNWKTRICN 1283
            EEGCPYG++CTFLHDEQSK RESV                         KPSNWKTRICN
Sbjct: 173  EEGCPYGDSCTFLHDEQSKNRESV------AISFGGGGGGGGSGNGSNTKPSNWKTRICN 226

Query: 1284 KWELTGYCPFGSKCHFAHGAAELHQFGG--LDSEVTDST---PDAKQGAVPAKTSVDTMV 1448
            KWELTGYCPFG+KCHFAHGAAELH++GG  +++E  DS+   PD KQG +P K   DT+V
Sbjct: 227  KWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLP-KAPGDTLV 285

Query: 1449 TSV---PHSDGYLIGVQSQRLSNATQKTGPRSLQKWKGPDKISKIYGDWIDDL 1598
             SV   PHSD Y + V SQR +   Q+ G R+ QKWKGPDKIS+IYGDWIDD+
Sbjct: 286  ASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDI 338


>ref|XP_004167357.1| PREDICTED: zinc finger CCCH domain-containing protein 12-like
            [Cucumis sativus]
          Length = 350

 Score =  434 bits (1117), Expect = e-119
 Identities = 226/358 (63%), Positives = 263/358 (73%), Gaps = 20/358 (5%)
 Frame = +3

Query: 585  FSNGNVVQVLSGHPGNGDNENWGSGVGDEVWATEDDYGMWN--GEASGETNPNSSYEGRM 758
            +S GNVV V+SG      NENW      EVWATED+Y  WN  G+ S +T  NSSY+ R 
Sbjct: 3    YSGGNVVHVISGT----SNENWPG----EVWATEDEYRAWNNGGDGSVDTPSNSSYDQRQ 54

Query: 759  SQS--GSEPPNKRSRNSQSGDLMSSNRAKAIGKMFYKTKLCCKFRAGTCPYISNCNFAHS 932
            SQS  GSEPPNK+SR+SQ  D+ SSNR+KAIGKMF+KTKLCCKFRAGTCPYI+NCNFAHS
Sbjct: 55   SQSRSGSEPPNKKSRSSQ--DVTSSNRSKAIGKMFFKTKLCCKFRAGTCPYITNCNFAHS 112

Query: 933  VEELRKPPPNWQEIVAAHEEDQAASSEPREEFQIPILGVTD---ETQRSYKGRHCKKFYT 1103
            +EELR+PP NWQEIVAAHEE++A  SEPREEFQIP LG ++   E+QRSYKGRHCKKFYT
Sbjct: 113  IEELRRPPHNWQEIVAAHEEEKAVLSEPREEFQIPSLGTSNFGSESQRSYKGRHCKKFYT 172

Query: 1104 EEGCPYGENCTFLHDEQSKARESVXXXXXXXXXXXXXXXXXXXXXXXT-----LKPSNWK 1268
            EEGCPYG++CTFLHDEQSK RESV                       +      KPSNWK
Sbjct: 173  EEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYSGGGGGGGGGGGGGSGNGSNTKPSNWK 232

Query: 1269 TRICNKWELTGYCPFGSKCHFAHGAAELHQFGG--LDSEVTDST---PDAKQGAVPAKTS 1433
            TRICNKWELTGYCPFG+KCHFAHGAAELH++GG  +++E  DS+   PD KQG +P K  
Sbjct: 233  TRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMETETRDSSAAPPDLKQGVLP-KAP 291

Query: 1434 VDTMVTSV---PHSDGYLIGVQSQRLSNATQKTGPRSLQKWKGPDKISKIYGDWIDDL 1598
             DT+V SV   PHSD Y + V SQR +   Q+ G R+ QKWKGPDKIS+IYGDWIDD+
Sbjct: 292  GDTLVASVPSAPHSDVYHVVVPSQRSTIVIQRPGQRTHQKWKGPDKISRIYGDWIDDI 349


>ref|XP_002527651.1| nucleic acid binding protein, putative [Ricinus communis]
            gi|223532956|gb|EEF34722.1| nucleic acid binding protein,
            putative [Ricinus communis]
          Length = 349

 Score =  407 bits (1047), Expect = e-111
 Identities = 222/365 (60%), Positives = 254/365 (69%), Gaps = 19/365 (5%)
 Frame = +3

Query: 561  MDYRRENGFSNGNVVQVLSGHPGNGDNENWGSGVGDE--VWATEDDYGMWNGE--ASGET 728
            MDY R+N      VV V+   PG G  +NW     D   VWATEDDY MWN     +  T
Sbjct: 1    MDYSRDN------VVHVI---PGTGP-DNWLPNSADSGVVWATEDDYQMWNNSDGPNDNT 50

Query: 729  NPNSSYEGRMSQSGSEPPNKRSRNSQSGDLMSSNRAKAIGKMFYKTKLCCKFRAGTCPYI 908
              NSS++ R   SGSEPPNK+S+N+ S +L S    K+IGKMF+KTKLCCKFRAGTCPYI
Sbjct: 51   PSNSSFQSR---SGSEPPNKKSKNN-SQELSSK---KSIGKMFFKTKLCCKFRAGTCPYI 103

Query: 909  SNCNFAHSVEELRKPPPNWQEIVAAHEEDQAASSEPREEFQIP-ILGVTDETQRSYKGRH 1085
            +NCNFAHS+EELR+PPPNWQEIVAAHEE++    E REEFQIP I G + E+QRSYKGRH
Sbjct: 104  TNCNFAHSIEELRRPPPNWQEIVAAHEEERGNVMEVREEFQIPSIGGFSGESQRSYKGRH 163

Query: 1086 CKKFYTEEGCPYGENCTFLHDEQSKARESV------XXXXXXXXXXXXXXXXXXXXXXXT 1247
            CKKFYTEEGCPYG+NCTFLHDEQSK RESV                              
Sbjct: 164  CKKFYTEEGCPYGDNCTFLHDEQSKNRESVAISLGPGGYGGGGGGGAGSGNGSGGGSAGN 223

Query: 1248 LKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHQFGG--LDSEVTD--STP-DAKQG 1412
            +KPSNWKTRICNKWELTGYCPFG+KCHFAHGAAELH++GG  ++SE  D  S P D KQG
Sbjct: 224  VKPSNWKTRICNKWELTGYCPFGNKCHFAHGAAELHRYGGGLMESEGKDPSSVPADTKQG 283

Query: 1413 AVPAKTSVDTM---VTSVPHSDGYLIGVQSQRLSNATQKTGPRSLQKWKGPDKISKIYGD 1583
             V +KT  D +   V SVPHSD Y +GV SQR S   Q+ G RS QKWKGPDKIS+IYGD
Sbjct: 284  GVLSKTPADIVVASVASVPHSDVYHLGVPSQRPSILMQRPGQRSHQKWKGPDKISRIYGD 343

Query: 1584 WIDDL 1598
            WIDD+
Sbjct: 344  WIDDI 348


>ref|XP_003516789.1| PREDICTED: zinc finger CCCH domain-containing protein 56-like
            [Glycine max]
          Length = 368

 Score =  402 bits (1033), Expect = e-109
 Identities = 220/380 (57%), Positives = 258/380 (67%), Gaps = 34/380 (8%)
 Frame = +3

Query: 561  MDYRRENGFSNGNVVQVLSGHPGNGDN-ENWGSGVGDEVWATEDDYGMWNGEASG---ET 728
            MD+ R+     GNVVQ+++G  G G   E+W     D  WATED+Y  WN   SG   ET
Sbjct: 1    MDFARD-----GNVVQIITGGGGGGGGGESWSGDQAD--WATEDEYRFWNNNNSGGDSET 53

Query: 729  NP-NSSYEGRMSQSGSEPPNKRSRNSQSGDLMSSNRAKAIGKMFYKTKLCCKFRAGTCPY 905
             P NS+YEGR     SEPP+K+SRNS S +  SSNR+KAIGKMF+KTKLCCKFRAGTCPY
Sbjct: 54   TPSNSNYEGR----SSEPPSKKSRNS-SQEGSSSNRSKAIGKMFFKTKLCCKFRAGTCPY 108

Query: 906  ISNCNFAHSVEELRKPPPNWQEIVAAHEEDQAASSE-PREEFQIPILGVT----DETQRS 1070
            I+NCNFAHS+EELR+PPPNWQEIVAAHEE++A   E PREEFQIP +G T    +  QRS
Sbjct: 109  ITNCNFAHSIEELRRPPPNWQEIVAAHEEEKAVMIEPPREEFQIPTVGSTTFSGEMMQRS 168

Query: 1071 YKGRHCKKFYTEEGCPYGENCTFLHDEQSKARESVXXXXXXXXXXXXXXXXXXXXXXXT- 1247
            YKGRHCKKFYTEEGCPYG++CTFLHDEQSK RESV                       + 
Sbjct: 169  YKGRHCKKFYTEEGCPYGDSCTFLHDEQSKNRESVAISLGPGGYGGGGGGGGGVGGGASG 228

Query: 1248 -------------LKPSNWKTRICNKWELTGYCPFGSKCHFAHGAAELHQFGG--LDSEV 1382
                          KPSNWKTRICNKWE+TGYCPFG+KCHFAHGA ELH++GG  ++ E 
Sbjct: 229  GNGGANAAGNGPNSKPSNWKTRICNKWEMTGYCPFGNKCHFAHGATELHRYGGGLMEGEN 288

Query: 1383 TDSTP----DAKQGAVPAKTSVDTM---VTSVPHSDGYLIGVQSQRLSN-ATQKTGPRSL 1538
             D+      D  +G VP+K S D +   VT V HSD Y IGV SQR S+   Q+ G R+ 
Sbjct: 289  RDAASAVAGDTNKG-VPSKASADNVVAAVTLVAHSDVYHIGVPSQRPSSMVIQRPGQRAH 347

Query: 1539 QKWKGPDKISKIYGDWIDDL 1598
            QKWKGPDKIS+IYGDWIDD+
Sbjct: 348  QKWKGPDKISRIYGDWIDDI 367


Top