BLASTX nr result

ID: Scutellaria24_contig00005192 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005192
         (623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putat...   157   2e-36
ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-l...   155   4e-36
ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-l...   155   4e-36
ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-l...   155   4e-36
ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-l...   155   4e-36

>ref|XP_002523061.1| Small nuclear ribonucleoprotein SM D3, putative [Ricinus communis]
           gi|223537623|gb|EEF39246.1| Small nuclear
           ribonucleoprotein SM D3, putative [Ricinus communis]
          Length = 147

 Score =  157 bits (396), Expect = 2e-36
 Identities = 72/72 (100%), Positives = 72/72 (100%)
 Frame = -3

Query: 270 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 91
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75

Query: 90  IDKVQEETKSRS 55
           IDKVQEETKSRS
Sbjct: 76  IDKVQEETKSRS 87


>ref|XP_004171725.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cucumis sativus]
          Length = 149

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -3

Query: 270 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 91
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75

Query: 90  IDKVQEETKSRS 55
           IDKVQEETKSR+
Sbjct: 76  IDKVQEETKSRA 87


>ref|XP_004170111.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Cucumis sativus]
          Length = 149

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -3

Query: 270 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 91
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75

Query: 90  IDKVQEETKSRS 55
           IDKVQEETKSR+
Sbjct: 76  IDKVQEETKSRA 87


>ref|XP_003554520.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 148

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -3

Query: 270 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 91
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75

Query: 90  IDKVQEETKSRS 55
           IDKVQEETKSR+
Sbjct: 76  IDKVQEETKSRA 87


>ref|XP_003518961.1| PREDICTED: probable U6 snRNA-associated Sm-like protein LSm4-like
           [Glycine max]
          Length = 149

 Score =  155 bits (393), Expect = 4e-36
 Identities = 71/72 (98%), Positives = 72/72 (100%)
 Frame = -3

Query: 270 LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 91
           LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV
Sbjct: 16  LVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECYIRGNTIKYLRVPDEV 75

Query: 90  IDKVQEETKSRS 55
           IDKVQEETKSR+
Sbjct: 76  IDKVQEETKSRT 87


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