BLASTX nr result

ID: Scutellaria24_contig00005147 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005147
         (1375 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing fac...   264   4e-68
ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing fac...   261   4e-67
ref|XP_002523299.1| arginine/serine-rich splicing factor, putati...   260   7e-67
ref|XP_002302651.1| predicted protein [Populus trichocarpa] gi|2...   258   2e-66
gb|AFK41208.1| unknown [Medicago truncatula]                          248   3e-63

>ref|XP_004133800.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Cucumis
            sativus] gi|449477961|ref|XP_004155176.1| PREDICTED:
            arginine/serine-rich-splicing factor RSP31-like [Cucumis
            sativus]
          Length = 253

 Score =  264 bits (675), Expect = 4e-68
 Identities = 138/204 (67%), Positives = 150/204 (73%), Gaps = 4/204 (1%)
 Frame = +3

Query: 468  QNLHMFAGFAFVYLDDERDAEDAIRSLDNVTFGRDRRRLSVEWAKGERGRHRDGRT--AN 641
            + + M +GFAFVY +DERDAEDAIR LDN+ FG DRRRLSVEWA+GERGRHRDG    AN
Sbjct: 29   ERIDMKSGFAFVYFEDERDAEDAIRGLDNLPFGYDRRRLSVEWARGERGRHRDGSKSMAN 88

Query: 642  QRPTKTLFVINFDPVRTKVHDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTH 821
            QRPTKTLFVINFDP+RT+V DIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTH
Sbjct: 89   QRPTKTLFVINFDPIRTRVRDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTH 148

Query: 822  MSKVLDRVVSVEYALRDDDERGGIHE--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG 995
            MSK+LDRVVSVEYALRDD ERG   +                                 G
Sbjct: 149  MSKILDRVVSVEYALRDDGERGDPFDESPRRAGGYGRPGDSPYRRSPSPVFRRRPSPDYG 208

Query: 996  RDRSPVYDRYNGPSYDRPKSPDYG 1067
            R  SP YDRYNGP Y+R +SPDYG
Sbjct: 209  RAHSPAYDRYNGP-YERRRSPDYG 231


>ref|XP_003548264.1| PREDICTED: arginine/serine-rich-splicing factor RSP31-like [Glycine
            max]
          Length = 264

 Score =  261 bits (666), Expect = 4e-67
 Identities = 131/196 (66%), Positives = 149/196 (76%)
 Frame = +3

Query: 480  MFAGFAFVYLDDERDAEDAIRSLDNVTFGRDRRRLSVEWAKGERGRHRDGRTANQRPTKT 659
            M +GFAFVY +DERDAE+AIR+LDNV FG ++RRLSVEWA+GERGRHRDG  ANQ+PTKT
Sbjct: 33   MKSGFAFVYYEDERDAEEAIRALDNVPFGHEKRRLSVEWARGERGRHRDGSKANQKPTKT 92

Query: 660  LFVINFDPVRTKVHDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMSKVLD 839
            LFVINFDP+RT+V DIE+HFEPYG VL+VRIRRNFAFVQFETQEDATKA+ECT+MSK+LD
Sbjct: 93   LFVINFDPIRTRVRDIEKHFEPYGNVLHVRIRRNFAFVQFETQEDATKAIECTNMSKILD 152

Query: 840  RVVSVEYALRDDDERGGIHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDRSPVYD 1019
            RVVSVEYALRDD ERG  ++                               GR RSPVYD
Sbjct: 153  RVVSVEYALRDDGERGDNYD---------SPRRGGYERSPSPYHRRPSPDYGRPRSPVYD 203

Query: 1020 RYNGPSYDRPKSPDYG 1067
            RYNG   DR +SPDYG
Sbjct: 204  RYNGGGPDRRRSPDYG 219


>ref|XP_002523299.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
            gi|223537387|gb|EEF39015.1| arginine/serine-rich splicing
            factor, putative [Ricinus communis]
          Length = 259

 Score =  260 bits (664), Expect = 7e-67
 Identities = 132/202 (65%), Positives = 151/202 (74%), Gaps = 2/202 (0%)
 Frame = +3

Query: 468  QNLHMFAGFAFVYLDDERDAEDAIRSLDNVTFGRDRRRLSVEWAKGERGRHRDGRT--AN 641
            + + M +GFAFVY +DERDA DAIR LDN++FG DRR+LSVEWA+GERGRHRDG    AN
Sbjct: 30   ERVDMKSGFAFVYFEDERDAADAIRGLDNISFGYDRRKLSVEWARGERGRHRDGSRSMAN 89

Query: 642  QRPTKTLFVINFDPVRTKVHDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTH 821
            QRPTKTLFVINFDP+ T+V DI+RHFE YG+VL+VRIRRNFAFVQFETQEDATKALECTH
Sbjct: 90   QRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTH 149

Query: 822  MSKVLDRVVSVEYALRDDDERGGIHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRD 1001
            M+K+LDRVVSVEYALRDD ERG   +                               GR 
Sbjct: 150  MTKILDRVVSVEYALRDDSERGDKSD-------SPRRGSHYGRSPSPVYRRRPSPDYGRA 202

Query: 1002 RSPVYDRYNGPSYDRPKSPDYG 1067
            RSPVYD+YNGPSYDR +SP+YG
Sbjct: 203  RSPVYDKYNGPSYDRRRSPEYG 224


>ref|XP_002302651.1| predicted protein [Populus trichocarpa] gi|222844377|gb|EEE81924.1|
            predicted protein [Populus trichocarpa]
          Length = 236

 Score =  258 bits (660), Expect = 2e-66
 Identities = 131/202 (64%), Positives = 150/202 (74%), Gaps = 2/202 (0%)
 Frame = +3

Query: 468  QNLHMFAGFAFVYLDDERDAEDAIRSLDNVTFGRDRRRLSVEWAKGERGRHRDG--RTAN 641
            + + M +GFAFVY +D+RDA DA+R LDN+ FG DRRRLSVEWA+GERGRHRDG   TAN
Sbjct: 30   ERVDMKSGFAFVYFEDDRDAADAVRGLDNIPFGYDRRRLSVEWARGERGRHRDGPRSTAN 89

Query: 642  QRPTKTLFVINFDPVRTKVHDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTH 821
            QRPTKTLFVINFDP+ T+V DI+RHFE YG+VL+VRIRRNFAFVQFETQEDATKALECTH
Sbjct: 90   QRPTKTLFVINFDPIHTRVEDIKRHFERYGEVLHVRIRRNFAFVQFETQEDATKALECTH 149

Query: 822  MSKVLDRVVSVEYALRDDDERGGIHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRD 1001
            M+K+LDRVVSVEYALRDD ERG  ++                                R 
Sbjct: 150  MTKILDRVVSVEYALRDDSERGDRYDSPRRGSYNGRSPSPVYRRRPSPDYV-------RA 202

Query: 1002 RSPVYDRYNGPSYDRPKSPDYG 1067
            RSPVYD+YNGP YDR +SPDYG
Sbjct: 203  RSPVYDKYNGPVYDRRQSPDYG 224


>gb|AFK41208.1| unknown [Medicago truncatula]
          Length = 249

 Score =  248 bits (632), Expect = 3e-63
 Identities = 126/200 (63%), Positives = 146/200 (73%)
 Frame = +3

Query: 468  QNLHMFAGFAFVYLDDERDAEDAIRSLDNVTFGRDRRRLSVEWAKGERGRHRDGRTANQR 647
            + + M +GFAFVY +DERDAE+AIR+LDN+ FG D+RRLSVEWA+GERGRHRDG   NQ+
Sbjct: 29   ERVDMKSGFAFVYYEDERDAEEAIRALDNIPFGHDKRRLSVEWARGERGRHRDGSKPNQK 88

Query: 648  PTKTLFVINFDPVRTKVHDIERHFEPYGKVLNVRIRRNFAFVQFETQEDATKALECTHMS 827
            PTKTLFVINFDP+RT+V DIERHF+PYG + +VRIRRNFAFVQ+ETQEDATKALECT+MS
Sbjct: 89   PTKTLFVINFDPIRTRVSDIERHFKPYGPLHHVRIRRNFAFVQYETQEDATKALECTNMS 148

Query: 828  KVLDRVVSVEYALRDDDERGGIHEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRDRS 1007
            K+LDRVVSVEYALRDD +R                                    GR RS
Sbjct: 149  KILDRVVSVEYALRDDSDR------VDNYGGSPRRGGGLARSPSPGYRRRPSPDYGRPRS 202

Query: 1008 PVYDRYNGPSYDRPKSPDYG 1067
            PVYDRY GP  DR +SPDYG
Sbjct: 203  PVYDRYTGP--DRRRSPDYG 220


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