BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00005116
         (1721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-...   640   0.0  
emb|CBI41056.3| unnamed protein product [Vitis vinifera]              640   0.0  
ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|40909...   641   0.0  
gb|AAG31173.1| COP1 [Ipomoea nil]                                     627   0.0  
ref|XP_002271415.1| PREDICTED: E3 ubiquitin-protein ligase COP1 ...   612   e-178

>ref|XP_002270330.2| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 687

 Score =  640 bits (1651), Expect(2) = 0.0
 Identities = 318/405 (78%), Positives = 357/405 (88%), Gaps = 2/405 (0%)
 Frame = +2

Query: 209  IPRKDA-SGELDDQSLSQIGLAMARKRQIHAQFNDLQDCYLQRRRHGARLSSEPQGQHLH 385
            + RKDA SG   D  ++Q GL +ARKR++HAQFNDLQDCYLQ+RRH  R   + + +  +
Sbjct: 285  LQRKDAYSGS--DSHVTQSGLVVARKRRLHAQFNDLQDCYLQKRRHWVRQQHKQEERDTN 342

Query: 386  GLPREGYTEELEEFQSVLSSFTRYSRLQVAAELRHGDLFHS-DIVSSIEFDRDDELFATA 562
               REGY   LE+FQSVL++FTRYSRL+V AELRHGDLFHS +IVSSIEFDRDDELFATA
Sbjct: 343  S-SREGYHAGLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 401

Query: 563  GVSRRIKIYEFSSVVNELDDAQCPVVEMFTRSKLSCLSWNKYTKNLIASSDYEGIVTVWD 742
            GVSRRIK++EFSSVVNE  D  CPVVEM TRSKLSCLSWNKYTKN IASSDYEGIVTVWD
Sbjct: 402  GVSRRIKVFEFSSVVNEPADVHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWD 461

Query: 743  VTTRQSVMEYEEHEKRAWSVDFSPTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANIC 922
            VTTRQSVMEYEEHEKRAWSVDFS TEPSMLVSGSDDCKVK+WCTKQEASVLNIDMKANIC
Sbjct: 462  VTTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKIWCTKQEASVLNIDMKANIC 521

Query: 923  SVKYNPESSVHVAVGSADHHIHYYDLRKTSQPLHILNGHKKAVSYVKFLSNYELASASTD 1102
            SVKYNP SS++VAVGSADHHIHYYDLR  SQPLH+ +GH+KAVSYVKFLSN ELASASTD
Sbjct: 522  SVKYNPGSSIYVAVGSADHHIHYYDLRNISQPLHVFSGHRKAVSYVKFLSNNELASASTD 581

Query: 1103 STLRLWDVKKNVPVRIFRGHTNEKNFVGLTVNNKYLACGSETNEVFVYHKAISKPAAWNK 1282
            STLRLWDVK+N+PVR FRGH+NEKNFVGLTVN++Y+ACGSETNEVF YHKAISKPAAW++
Sbjct: 582  STLRLWDVKENMPVRTFRGHSNEKNFVGLTVNSEYIACGSETNEVFAYHKAISKPAAWHR 641

Query: 1283 FANSKTDEAEEDTASYFISAVCWKSNSPTMVTANSRGAIKVLALA 1417
            F +S  D+ ++D  SYFISAVCWKS+SPTM+TANS+G IKVL LA
Sbjct: 642  FGSSDLDDTDDDNGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 686



 Score = 41.2 bits (95), Expect(2) = 0.0
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = +3

Query: 6   LCRRRDRYSTKMRMLVNDPTSKSLGLSLMDKQSGATVSRNTIPPGRSCLSSGDPQNR 176
           L R R+RYS K+RML +DP +     SL DK S   +S      GR  + +G  QN+
Sbjct: 218 LYRSRERYSVKLRMLADDPIATKAWPSLTDKHSSGIISSAHSTQGR--MGAGSSQNK 272


>emb|CBI41056.3| unnamed protein product [Vitis vinifera]
          Length = 602

 Score =  640 bits (1651), Expect(2) = 0.0
 Identities = 318/405 (78%), Positives = 357/405 (88%), Gaps = 2/405 (0%)
 Frame = +2

Query: 209  IPRKDA-SGELDDQSLSQIGLAMARKRQIHAQFNDLQDCYLQRRRHGARLSSEPQGQHLH 385
            + RKDA SG   D  ++Q GL +ARKR++HAQFNDLQDCYLQ+RRH  R   + + +  +
Sbjct: 200  LQRKDAYSGS--DSHVTQSGLVVARKRRLHAQFNDLQDCYLQKRRHWVRQQHKQEERDTN 257

Query: 386  GLPREGYTEELEEFQSVLSSFTRYSRLQVAAELRHGDLFHS-DIVSSIEFDRDDELFATA 562
               REGY   LE+FQSVL++FTRYSRL+V AELRHGDLFHS +IVSSIEFDRDDELFATA
Sbjct: 258  S-SREGYHAGLEDFQSVLTTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDELFATA 316

Query: 563  GVSRRIKIYEFSSVVNELDDAQCPVVEMFTRSKLSCLSWNKYTKNLIASSDYEGIVTVWD 742
            GVSRRIK++EFSSVVNE  D  CPVVEM TRSKLSCLSWNKYTKN IASSDYEGIVTVWD
Sbjct: 317  GVSRRIKVFEFSSVVNEPADVHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYEGIVTVWD 376

Query: 743  VTTRQSVMEYEEHEKRAWSVDFSPTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANIC 922
            VTTRQSVMEYEEHEKRAWSVDFS TEPSMLVSGSDDCKVK+WCTKQEASVLNIDMKANIC
Sbjct: 377  VTTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKIWCTKQEASVLNIDMKANIC 436

Query: 923  SVKYNPESSVHVAVGSADHHIHYYDLRKTSQPLHILNGHKKAVSYVKFLSNYELASASTD 1102
            SVKYNP SS++VAVGSADHHIHYYDLR  SQPLH+ +GH+KAVSYVKFLSN ELASASTD
Sbjct: 437  SVKYNPGSSIYVAVGSADHHIHYYDLRNISQPLHVFSGHRKAVSYVKFLSNNELASASTD 496

Query: 1103 STLRLWDVKKNVPVRIFRGHTNEKNFVGLTVNNKYLACGSETNEVFVYHKAISKPAAWNK 1282
            STLRLWDVK+N+PVR FRGH+NEKNFVGLTVN++Y+ACGSETNEVF YHKAISKPAAW++
Sbjct: 497  STLRLWDVKENMPVRTFRGHSNEKNFVGLTVNSEYIACGSETNEVFAYHKAISKPAAWHR 556

Query: 1283 FANSKTDEAEEDTASYFISAVCWKSNSPTMVTANSRGAIKVLALA 1417
            F +S  D+ ++D  SYFISAVCWKS+SPTM+TANS+G IKVL LA
Sbjct: 557  FGSSDLDDTDDDNGSYFISAVCWKSDSPTMLTANSQGTIKVLVLA 601



 Score = 41.2 bits (95), Expect(2) = 0.0
 Identities = 23/57 (40%), Positives = 31/57 (54%)
 Frame = +3

Query: 6   LCRRRDRYSTKMRMLVNDPTSKSLGLSLMDKQSGATVSRNTIPPGRSCLSSGDPQNR 176
           L R R+RYS K+RML +DP +     SL DK S   +S      GR  + +G  QN+
Sbjct: 133 LYRSRERYSVKLRMLADDPIATKAWPSLTDKHSSGIISSAHSTQGR--MGAGSSQNK 187


>ref|NP_001234047.1| COP1 homolog [Solanum lycopersicum] gi|4090943|gb|AAC98912.1| COP1
            homolog [Solanum lycopersicum]
          Length = 677

 Score =  641 bits (1653), Expect(2) = 0.0
 Identities = 319/409 (77%), Positives = 357/409 (87%), Gaps = 2/409 (0%)
 Frame = +2

Query: 197  ASPLIPRKDAS-GELDDQSLSQIGLAMARKRQIHAQFNDLQDCYLQRRRHGARLSSEPQG 373
            +SP   RKD S  EL+ Q +SQ GLA+ RK++++AQFNDLQ+CYLQ+RR  A  S   + 
Sbjct: 268  SSPGPQRKDTSISELNSQHMSQSGLAVVRKKRVNAQFNDLQECYLQKRRQLANKSRVKEE 327

Query: 374  QHLHGLPREGYTEELEEFQSVLSSFTRYSRLQVAAELRHGDLFHS-DIVSSIEFDRDDEL 550
            +    + REGY+E L +FQSVLS+FTRYSRL+V AELRHGDLFHS +IVSSIEFDRDDEL
Sbjct: 328  KDADVVQREGYSEGLADFQSVLSTFTRYSRLRVIAELRHGDLFHSANIVSSIEFDRDDEL 387

Query: 551  FATAGVSRRIKIYEFSSVVNELDDAQCPVVEMFTRSKLSCLSWNKYTKNLIASSDYEGIV 730
            FATAGVSRRIK+++FSSVVNE  DA CPVVEM TRSKLSCLSWNKYTKN IASSDY+GIV
Sbjct: 388  FATAGVSRRIKVFDFSSVVNEPADAHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYDGIV 447

Query: 731  TVWDVTTRQSVMEYEEHEKRAWSVDFSPTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMK 910
            TVWDVTTRQSVMEYEEHEKRAWSVDFS TEPSMLVSGSDDCKVKVWCTKQEASVLNIDMK
Sbjct: 448  TVWDVTTRQSVMEYEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMK 507

Query: 911  ANICSVKYNPESSVHVAVGSADHHIHYYDLRKTSQPLHILNGHKKAVSYVKFLSNYELAS 1090
            ANIC VKYNP SSVH+AVGSADHHIHYYDLR TSQP+HI +GH+KAVSYVKFLSN ELAS
Sbjct: 508  ANICCVKYNPGSSVHIAVGSADHHIHYYDLRNTSQPVHIFSGHRKAVSYVKFLSNNELAS 567

Query: 1091 ASTDSTLRLWDVKKNVPVRIFRGHTNEKNFVGLTVNNKYLACGSETNEVFVYHKAISKPA 1270
            ASTDSTLRLWDVK N+PVR  RGHTNEKNFVGL+VNN++L+CGSETNEVFVYHKAISKP 
Sbjct: 568  ASTDSTLRLWDVKDNLPVRTLRGHTNEKNFVGLSVNNEFLSCGSETNEVFVYHKAISKPV 627

Query: 1271 AWNKFANSKTDEAEEDTASYFISAVCWKSNSPTMVTANSRGAIKVLALA 1417
             W++F +   DEA+ED  SYFISAVCWKS+SPTM+ ANS+G IKVL LA
Sbjct: 628  TWHRFGSPDIDEADEDAGSYFISAVCWKSDSPTMLAANSQGTIKVLVLA 676



 Score = 38.9 bits (89), Expect(2) = 0.0
 Identities = 25/72 (34%), Positives = 33/72 (45%), Gaps = 14/72 (19%)
 Frame = +3

Query: 6   LCRRRDRYSTKMRMLVNDPTSKSLGLSLMDKQSGATVSRNTIPPG--------------R 143
           L R RDRYS K+RML +DP  K    S  D+  G   S +   PG              +
Sbjct: 205 LYRARDRYSMKLRMLADDPIGKKPWSSSTDRNFGGLFSTSQNAPGGLPTGNLTFKKVDSK 264

Query: 144 SCLSSGDPQNRD 179
           + +SS  PQ +D
Sbjct: 265 AQISSPGPQRKD 276


>gb|AAG31173.1| COP1 [Ipomoea nil]
          Length = 677

 Score =  627 bits (1616), Expect(2) = 0.0
 Identities = 306/394 (77%), Positives = 345/394 (87%), Gaps = 1/394 (0%)
 Frame = +2

Query: 239  DDQSLSQIGLAMARKRQIHAQFNDLQDCYLQRRRHGARLSSEPQGQHLHGLPREGYTEEL 418
            D Q ++Q GLA+ RK+++HAQFNDLQ+CYLQ+RR  A      + +  +   REGY+  L
Sbjct: 283  DSQHMNQSGLAVMRKKRVHAQFNDLQECYLQKRRQLANQLQNKEERDQNVTRREGYSAGL 342

Query: 419  EEFQSVLSSFTRYSRLQVAAELRHGDLFHS-DIVSSIEFDRDDELFATAGVSRRIKIYEF 595
             EFQSVLS+FTRYSRL+V AELRHGD+FHS +IVSSIEFDRDDELFATAGVSRRIK+++F
Sbjct: 343  SEFQSVLSTFTRYSRLRVIAELRHGDIFHSANIVSSIEFDRDDELFATAGVSRRIKVFDF 402

Query: 596  SSVVNELDDAQCPVVEMFTRSKLSCLSWNKYTKNLIASSDYEGIVTVWDVTTRQSVMEYE 775
            SSVVNE  DA CPVVEM TRSKLSCLSWNKYTKN IASSDY+GIVTVWDVTTRQSVMEYE
Sbjct: 403  SSVVNEPADAHCPVVEMSTRSKLSCLSWNKYTKNHIASSDYDGIVTVWDVTTRQSVMEYE 462

Query: 776  EHEKRAWSVDFSPTEPSMLVSGSDDCKVKVWCTKQEASVLNIDMKANICSVKYNPESSVH 955
            EHEKRAWSVDFS T+PSMLVSGSDDCKVKVWCTKQEAS LNIDMKANIC VKYNP SS H
Sbjct: 463  EHEKRAWSVDFSRTDPSMLVSGSDDCKVKVWCTKQEASALNIDMKANICCVKYNPGSSFH 522

Query: 956  VAVGSADHHIHYYDLRKTSQPLHILNGHKKAVSYVKFLSNYELASASTDSTLRLWDVKKN 1135
            VAVGSADHHIHYYDLR TS PLHI +GHKKAVSYVKFLS++ELASASTDSTLRLWDVK N
Sbjct: 523  VAVGSADHHIHYYDLRNTSAPLHIFSGHKKAVSYVKFLSSHELASASTDSTLRLWDVKDN 582

Query: 1136 VPVRIFRGHTNEKNFVGLTVNNKYLACGSETNEVFVYHKAISKPAAWNKFANSKTDEAEE 1315
             PVR+FRGHTNEKNFVGL+V+N++++CGSETNEVFVYHKAISKP  W++F +   DEA+E
Sbjct: 583  SPVRVFRGHTNEKNFVGLSVSNEFISCGSETNEVFVYHKAISKPVTWHRFGSPDVDEADE 642

Query: 1316 DTASYFISAVCWKSNSPTMVTANSRGAIKVLALA 1417
            D  S+FISAVCWKS+SPTM+ ANS+G IKVL LA
Sbjct: 643  DVTSFFISAVCWKSDSPTMLAANSQGTIKVLVLA 676



 Score = 36.2 bits (82), Expect(2) = 0.0
 Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 6/59 (10%)
 Frame = +3

Query: 6   LCRRRDRYSTKMRMLVNDPTSKSLGLSLMDKQSGATVSRNTI---PPGRSC---LSSGD 164
           L R RDRYS K+RML +DP        L  K   ++V RNTI   P  RS    L+SG+
Sbjct: 207 LYRARDRYSMKLRMLADDP--------LGSKSRSSSVDRNTIGLFPSSRSAHGGLASGN 257


>ref|XP_002271415.1| PREDICTED: E3 ubiquitin-protein ligase COP1 [Vitis vinifera]
            gi|297739218|emb|CBI28869.3| unnamed protein product
            [Vitis vinifera]
          Length = 676

 Score =  612 bits (1579), Expect(2) = e-178
 Identities = 301/418 (72%), Positives = 351/418 (83%), Gaps = 1/418 (0%)
 Frame = +2

Query: 167  SKQGSDVNSSASPLIPRKDASGELDDQSLSQIGLAMARKRQIHAQFNDLQDCYLQRRRHG 346
            +KQ      ++S  + RKDA   LD Q ++Q G+A+ RK++IH+QFNDLQ CYLQ+RR  
Sbjct: 258  NKQLDGRGQASSQSLHRKDALTGLDSQCINQPGVAVVRKKRIHSQFNDLQQCYLQKRRQL 317

Query: 347  ARLSSEPQGQHLHGLPREGYTEELEEFQSVLSSFTRYSRLQVAAELRHGDLFHS-DIVSS 523
                 +   ++ + + REGY+  L +FQSVL++F++YSRL+V AELRHGDLFHS +IVSS
Sbjct: 318  VNKPHKQDERNTNVIHREGYSAGLADFQSVLTTFSQYSRLKVIAELRHGDLFHSANIVSS 377

Query: 524  IEFDRDDELFATAGVSRRIKIYEFSSVVNELDDAQCPVVEMFTRSKLSCLSWNKYTKNLI 703
            IEFD DDELFATAGVSRRIK+++FSSVVNE  +  CPVVEM TRSKLSCLSWNK TKN I
Sbjct: 378  IEFDCDDELFATAGVSRRIKVFDFSSVVNERAEMHCPVVEMSTRSKLSCLSWNKCTKNHI 437

Query: 704  ASSDYEGIVTVWDVTTRQSVMEYEEHEKRAWSVDFSPTEPSMLVSGSDDCKVKVWCTKQE 883
            ASSDYEGIVTVWDV TRQSVMEYEEHEKRAWSVDFS TEPS LVSGSDDCKVKVWCT QE
Sbjct: 438  ASSDYEGIVTVWDVNTRQSVMEYEEHEKRAWSVDFSRTEPSRLVSGSDDCKVKVWCTNQE 497

Query: 884  ASVLNIDMKANICSVKYNPESSVHVAVGSADHHIHYYDLRKTSQPLHILNGHKKAVSYVK 1063
            ASVLNIDMKANIC VKYNP SS+++AVGSADHHIHYYDLR TS PLHI +GHKKAVSYVK
Sbjct: 498  ASVLNIDMKANICCVKYNPGSSIYIAVGSADHHIHYYDLRNTSHPLHIFSGHKKAVSYVK 557

Query: 1064 FLSNYELASASTDSTLRLWDVKKNVPVRIFRGHTNEKNFVGLTVNNKYLACGSETNEVFV 1243
            FLSN ELASASTDSTLRLWDVK+N+PVR FRGHTNEKNFVGL+VN++Y++CGSETN+VFV
Sbjct: 558  FLSNNELASASTDSTLRLWDVKENLPVRTFRGHTNEKNFVGLSVNSEYISCGSETNDVFV 617

Query: 1244 YHKAISKPAAWNKFANSKTDEAEEDTASYFISAVCWKSNSPTMVTANSRGAIKVLALA 1417
            YHK ISKP  W+KF +   D+ ++D   YFISAVCWKS+SPTM+TANS+G IKVL L+
Sbjct: 618  YHKEISKPVTWHKFGSPDVDDLDDDVGPYFISAVCWKSDSPTMLTANSQGTIKVLTLS 675



 Score = 40.4 bits (93), Expect(2) = e-178
 Identities = 25/60 (41%), Positives = 35/60 (58%)
 Frame = +3

Query: 3   QLCRRRDRYSTKMRMLVNDPTSKSLGLSLMDKQSGATVSRNTIPPGRSCLSSGDPQNRDL 182
           +L R RDRYS K+RM V+DP +     SL+ K S   VS +    G   ++SG+ QN+ L
Sbjct: 204 ELYRVRDRYSVKLRMHVDDPMATKPRTSLVGKSSSGLVSSSRKIQGG--MASGNLQNKQL 261