BLASTX nr result

ID: Scutellaria24_contig00004997 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004997
         (997 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-l...   178   2e-42
ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis tha...   178   2e-42
ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356 [Arab...   177   4e-42
ref|XP_002310906.1| high mobility group family [Populus trichoca...   177   5e-42
ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-l...   174   3e-41

>ref|XP_004150195.1| PREDICTED: high mobility group B protein 7-like [Cucumis sativus]
           gi|449531370|ref|XP_004172659.1| PREDICTED: high
           mobility group B protein 7-like [Cucumis sativus]
          Length = 207

 Score =  178 bits (452), Expect = 2e-42
 Identities = 97/191 (50%), Positives = 127/191 (66%), Gaps = 8/191 (4%)
 Frame = +3

Query: 78  MAGGGASSNASRQRKRVEA---ESAPSSTALKRARNGSAFTKCEGCNKDVAVALISFHDC 248
           MAGGG+S    + RKRVEA   + A +  +L RA++GSAF +C+ C K V VALIS H C
Sbjct: 1   MAGGGSS----KSRKRVEATPADVAATGPSLVRAKDGSAFARCDECGKSVPVALISMHSC 56

Query: 249 SLDAKIKMNLEAQVVEMASETKKPAGERXXXXXXXXXXXXXXXXXXXXXXXXXX-----T 413
           SLDAKI+MNLE+Q VE  +++KKPA ++                               T
Sbjct: 57  SLDAKIRMNLESQTVEKQTQSKKPAEKKRSASSEPKTKKSRTEKKGKKDKDPNAPKRPPT 116

Query: 414 AFFVFMEDFRKSFKETNPDCKGAAMVAKEGGEKWKSMSDEDKKVYIDRAAELKAEYKKSL 593
           AFF+FM+DFRKS+KE NPD KG   VAKEGGEKWKSM+DE+KK Y D+AAELKAEY+K+L
Sbjct: 117 AFFIFMDDFRKSYKEANPDSKGVKEVAKEGGEKWKSMTDEEKKPYQDKAAELKAEYEKAL 176

Query: 594 GSNDAESDNEQ 626
            S +AE+++++
Sbjct: 177 ESRNAENEDDE 187


>ref|NP_568431.1| high-mobility group B6 protein [Arabidopsis thaliana]
           gi|75245985|sp|Q8LDF9.1|HMGB7_ARATH RecName: Full=High
           mobility group B protein 7; AltName:
           Full=Nucleosome/chromatin assembly factor group D 07;
           Short=Nucleosome/chromatin assembly factor group D 7
           gi|21554154|gb|AAM63233.1| unknown [Arabidopsis
           thaliana] gi|26452394|dbj|BAC43282.1| unknown protein
           [Arabidopsis thaliana] gi|332005781|gb|AED93164.1|
           high-mobility group B6 protein [Arabidopsis thaliana]
          Length = 241

 Score =  178 bits (452), Expect = 2e-42
 Identities = 101/190 (53%), Positives = 124/190 (65%), Gaps = 8/190 (4%)
 Frame = +3

Query: 78  MAGGGASSNASRQRKRVEAE-SAPSSTALKRARNGSAFTKCEGCNKDVAVALISFHDCSL 254
           MAG   +SNA +QRKRVEAE S+ +ST L+RA++GSAF  CEGCNK VAVALIS H+CSL
Sbjct: 1   MAGPSTTSNAPKQRKRVEAETSSNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSL 60

Query: 255 DAKIKMNLEAQVVEMASETKKPAGERXXXXXXXXXXXXXXXXXXXXXXXXXX-------T 413
           DAKI++NLEAQVVE  +E KK   E+                                 T
Sbjct: 61  DAKIRVNLEAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLT 120

Query: 414 AFFVFMEDFRKSFKETNPDCKGAAMVAKEGGEKWKSMSDEDKKVYIDRAAELKAEYKKSL 593
           AFF+FM DFRK+FK  +     A   AK GGEKWKS+++E+KKVY+D+AAELKAEY KSL
Sbjct: 121 AFFIFMSDFRKTFKSEHNGSL-AKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSL 179

Query: 594 GSNDAESDNE 623
            SNDA+ + E
Sbjct: 180 ESNDADEEEE 189


>ref|XP_002874129.1| hypothetical protein ARALYDRAFT_910356 [Arabidopsis lyrata subsp.
           lyrata] gi|297319966|gb|EFH50388.1| hypothetical protein
           ARALYDRAFT_910356 [Arabidopsis lyrata subsp. lyrata]
          Length = 193

 Score =  177 bits (449), Expect = 4e-42
 Identities = 101/188 (53%), Positives = 123/188 (65%), Gaps = 8/188 (4%)
 Frame = +3

Query: 78  MAGGGASSNASRQRKRVEAE-SAPSSTALKRARNGSAFTKCEGCNKDVAVALISFHDCSL 254
           MAG   +SNA +QRKRVEAE S  +ST L+RA++GSAF  CEGCNK VAVALIS H+CSL
Sbjct: 1   MAGPSTTSNAPKQRKRVEAETSTNTSTTLRRAKDGSAFALCEGCNKSVAVALISMHNCSL 60

Query: 255 DAKIKMNLEAQVVEMASETKKPAGERXXXXXXXXXXXXXXXXXXXXXXXXXX-------T 413
           DAKI++NLEAQVVE  +E KK   E+                                 T
Sbjct: 61  DAKIRVNLEAQVVETQAEAKKKPAEKKKTTSDGPKPKRLKKTNDEKKSSSTSNKPKRPLT 120

Query: 414 AFFVFMEDFRKSFKETNPDCKGAAMVAKEGGEKWKSMSDEDKKVYIDRAAELKAEYKKSL 593
           AFF+FM DFRK+FK T  +   A   AK GGEKWKS+++E+KKVY+D+AAELKAEY KSL
Sbjct: 121 AFFIFMNDFRKTFK-TEHNGSLAKDAAKIGGEKWKSLTEEEKKVYLDKAAELKAEYNKSL 179

Query: 594 GSNDAESD 617
            SNDA+ +
Sbjct: 180 ESNDADEE 187


>ref|XP_002310906.1| high mobility group family [Populus trichocarpa]
           gi|118483462|gb|ABK93630.1| unknown [Populus
           trichocarpa] gi|222853809|gb|EEE91356.1| high mobility
           group family [Populus trichocarpa]
          Length = 201

 Score =  177 bits (448), Expect = 5e-42
 Identities = 97/179 (54%), Positives = 120/179 (67%), Gaps = 9/179 (5%)
 Frame = +3

Query: 117 RKRVEAES------APSSTALKRARNGSAFTKCEGCNKDVAVALISFHDCSLDAKIKMNL 278
           RKRVEAES      A ++T+L RA++GSAFTKCE C KDV VALISFH CSLDAKIKMNL
Sbjct: 3   RKRVEAESTDGSVDANTTTSLVRAKDGSAFTKCEECKKDVPVALISFHSCSLDAKIKMNL 62

Query: 279 EAQVVEMASETKKPAGER---XXXXXXXXXXXXXXXXXXXXXXXXXXTAFFVFMEDFRKS 449
           EAQVVE  +E K+   ER                             TAFF+FM+DFRK 
Sbjct: 63  EAQVVEKPTEAKQKPAERKKGSSTEPKLKKAKKEKKGRDPNAPKRPPTAFFLFMDDFRKE 122

Query: 450 FKETNPDCKGAAMVAKEGGEKWKSMSDEDKKVYIDRAAELKAEYKKSLGSNDAESDNEQ 626
           +KE NPD K    VAKEGG +WKSM+DE+KK Y+D+AAELKAE  K+L S++AE+++++
Sbjct: 123 YKEANPDSKDVKKVAKEGGVRWKSMTDEEKKQYVDKAAELKAENDKALESDNAENEDDE 181


>ref|XP_002267697.2| PREDICTED: high mobility group B protein 7-like [Vitis vinifera]
           gi|147815109|emb|CAN61363.1| hypothetical protein
           VITISV_034306 [Vitis vinifera]
           gi|297742725|emb|CBI35359.3| unnamed protein product
           [Vitis vinifera]
          Length = 190

 Score =  174 bits (441), Expect = 3e-41
 Identities = 91/175 (52%), Positives = 118/175 (67%), Gaps = 3/175 (1%)
 Frame = +3

Query: 111 RQRKRVEAESAPSSTALKRARNGSAFTKCEGCNKDVAVALISFHDCSLDAKIKMNLEAQV 290
           +QRKRVEAE++    +LKRAR+GSAF +CE C KDV V LI  H CSL+AKIK+NLEAQV
Sbjct: 5   KQRKRVEAETS----SLKRARDGSAFIRCEECKKDVPVVLIDMHSCSLEAKIKLNLEAQV 60

Query: 291 VEMASETKKPAGERXXXXXXXXXXXXXXXXXXXXXXXXXX---TAFFVFMEDFRKSFKET 461
           VE  ++ KK   E+                             TAFF+FM+DFRK +KE+
Sbjct: 61  VEKVTDVKKKPAEKKNATTTEPKPKKSRRLRKVKDPNMPKRPPTAFFLFMDDFRKEYKES 120

Query: 462 NPDCKGAAMVAKEGGEKWKSMSDEDKKVYIDRAAELKAEYKKSLGSNDAESDNEQ 626
           NPD K  ++VAKEGGEKWKSM+DE+KK Y+D+AAELKAEY K++ + +AE+  E+
Sbjct: 121 NPDSKNVSVVAKEGGEKWKSMTDEEKKPYVDKAAELKAEYDKAMETYNAENGEEE 175


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