BLASTX nr result

ID: Scutellaria24_contig00004897 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004897
         (306 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subu...   166   2e-39
ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus commu...   166   2e-39
ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|2...   166   2e-39
dbj|BAF03493.1| Ku70 homolog [Populus nigra]                          164   9e-39
ref|NP_564012.1| ATP-dependent DNA helicase 2 subunit KU70 [Arab...   158   4e-37

>ref|XP_002267875.1| PREDICTED: ATP-dependent DNA helicase 2 subunit KU70 [Vitis
           vinifera] gi|296089629|emb|CBI39448.3| unnamed protein
           product [Vitis vinifera]
          Length = 623

 Score =  166 bits (420), Expect = 2e-39
 Identities = 75/96 (78%), Positives = 88/96 (91%)
 Frame = +1

Query: 7   YKNDNIMFSADELSVIKRVTTGHLRLLGFKPLGCLKDYHNLRPSTFVFPSDEEVIGSTCV 186
           YKN N+ F+ +ELS +KR++TGHLRLLGFKPL CLKDYHNLRPSTFVFP+D+EV+GSTC+
Sbjct: 328 YKNKNVKFTTEELSEVKRISTGHLRLLGFKPLSCLKDYHNLRPSTFVFPTDKEVVGSTCI 387

Query: 187 FIALHRSMLRLQRFAIAFYGSHTHPQLVALVAQDKI 294
           FIALHRSMLRL+RFA+AFYG   HPQLVALVAQD+I
Sbjct: 388 FIALHRSMLRLKRFAVAFYGGSAHPQLVALVAQDEI 423


>ref|XP_002521532.1| ku P70 DNA helicase, putative [Ricinus communis]
           gi|223539210|gb|EEF40803.1| ku P70 DNA helicase,
           putative [Ricinus communis]
          Length = 626

 Score =  166 bits (420), Expect = 2e-39
 Identities = 78/99 (78%), Positives = 90/99 (90%)
 Frame = +1

Query: 7   YKNDNIMFSADELSVIKRVTTGHLRLLGFKPLGCLKDYHNLRPSTFVFPSDEEVIGSTCV 186
           YKN+NI FS +EL+ IKR++TGHLRLLGFKPL CL+DYHNLRPSTFVFPSD+EVIGST +
Sbjct: 330 YKNENIKFSVEELAEIKRISTGHLRLLGFKPLSCLRDYHNLRPSTFVFPSDKEVIGSTSI 389

Query: 187 FIALHRSMLRLQRFAIAFYGSHTHPQLVALVAQDKIASA 303
           FIALHRSMLRL RFA+AFYG  +HP+LVALVAQD+I SA
Sbjct: 390 FIALHRSMLRLNRFAVAFYGGSSHPRLVALVAQDEIVSA 428


>ref|XP_002317447.1| predicted protein [Populus trichocarpa] gi|222860512|gb|EEE98059.1|
           predicted protein [Populus trichocarpa]
          Length = 628

 Score =  166 bits (420), Expect = 2e-39
 Identities = 80/101 (79%), Positives = 90/101 (89%)
 Frame = +1

Query: 1   QSYKNDNIMFSADELSVIKRVTTGHLRLLGFKPLGCLKDYHNLRPSTFVFPSDEEVIGST 180
           Q YKNDNIM S +ELS IKRV+TGHL LLGFKPL CLKDYHNLRPSTF+FPSD+EVIGST
Sbjct: 329 QPYKNDNIMLSVEELSEIKRVSTGHLHLLGFKPLSCLKDYHNLRPSTFIFPSDKEVIGST 388

Query: 181 CVFIALHRSMLRLQRFAIAFYGSHTHPQLVALVAQDKIASA 303
           C+FIAL RSM+ L+RFA+AFYGS + PQLVALVAQD+I SA
Sbjct: 389 CIFIALLRSMVNLKRFAVAFYGSSSRPQLVALVAQDEIISA 429


>dbj|BAF03493.1| Ku70 homolog [Populus nigra]
          Length = 627

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/101 (78%), Positives = 89/101 (88%)
 Frame = +1

Query: 1   QSYKNDNIMFSADELSVIKRVTTGHLRLLGFKPLGCLKDYHNLRPSTFVFPSDEEVIGST 180
           Q YKNDNIM S +ELS IKRV+ GHL LLGFKPL CLKDYHNLRPSTF+FPSD+EVIGST
Sbjct: 329 QPYKNDNIMLSVEELSEIKRVSMGHLHLLGFKPLSCLKDYHNLRPSTFIFPSDKEVIGST 388

Query: 181 CVFIALHRSMLRLQRFAIAFYGSHTHPQLVALVAQDKIASA 303
           C+FIAL RSM+ L+RFA+AFYGS + PQLVALVAQD+I SA
Sbjct: 389 CIFIALLRSMVNLKRFAVAFYGSSSRPQLVALVAQDEIISA 429


>ref|NP_564012.1| ATP-dependent DNA helicase 2 subunit KU70 [Arabidopsis thaliana]
           gi|75309289|sp|Q9FQ08.1|KU70_ARATH RecName:
           Full=ATP-dependent DNA helicase 2 subunit KU70; AltName:
           Full=ATP-dependent DNA helicase 2 subunit 1; AltName:
           Full=ATP-dependent DNA helicase II 70 kDa subunit
           gi|12006424|gb|AAG44852.1|AF283759_1 Ku70-like protein
           [Arabidopsis thaliana] gi|62320632|dbj|BAD95294.1|
           Ku70-like protein [Arabidopsis thaliana]
           gi|332191406|gb|AEE29527.1| ATP-dependent DNA helicase 2
           subunit KU70 [Arabidopsis thaliana]
          Length = 621

 Score =  158 bits (400), Expect = 4e-37
 Identities = 74/100 (74%), Positives = 89/100 (89%)
 Frame = +1

Query: 1   QSYKNDNIMFSADELSVIKRVTTGHLRLLGFKPLGCLKDYHNLRPSTFVFPSDEEVIGST 180
           Q YKN NIMF+ +ELS +KR++TGHLRLLGFKPL CLKDYHNL+PSTF++PSD+EVIGST
Sbjct: 330 QPYKNQNIMFTVEELSQVKRISTGHLRLLGFKPLSCLKDYHNLKPSTFLYPSDKEVIGST 389

Query: 181 CVFIALHRSMLRLQRFAIAFYGSHTHPQLVALVAQDKIAS 300
             FIALHRSM++L+RFA+AFYG  T P+LVALVAQD+I S
Sbjct: 390 RAFIALHRSMIQLERFAVAFYGGTTPPRLVALVAQDEIES 429


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