BLASTX nr result

ID: Scutellaria24_contig00004754 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004754
         (254 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]               98   6e-19
dbj|BAG80685.1| ribosomal protein L32 [Populus alba]                   93   3e-17
gb|AAF87043.1|AC006535_21 T24P13.12 [Arabidopsis thaliana]             92   4e-17
gb|AAM60988.1| unknown [Arabidopsis thaliana]                          92   4e-17
ref|NP_564259.1| ribosomal L.2-like protein [Arabidopsis thalian...    92   4e-17

>gb|AFW90572.1| ribosomal protein L32 [Solanum tuberosum]
          Length = 132

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 49/83 (59%), Positives = 64/83 (77%)
 Frame = -3

Query: 249 HSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPFFGGAMELMAVPKRKVT 70
           H  ++PAPL + ++ ++  + P  VLPE+  ++N     P+SPF  G+MELMAVPK+KV+
Sbjct: 26  HITSRPAPLDSVVD-RLTATSPSLVLPENENNSNMF---PNSPFNWGSMELMAVPKKKVS 81

Query: 69  PHKRGIRNGPKALKPVPVIIRCK 1
           PHKRGIRNGPKALKPVPVIIRCK
Sbjct: 82  PHKRGIRNGPKALKPVPVIIRCK 104


>dbj|BAG80685.1| ribosomal protein L32 [Populus alba]
          Length = 138

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 51/89 (57%), Positives = 58/89 (65%), Gaps = 6/89 (6%)
 Frame = -3

Query: 249 HSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGAMELMAV 88
           H +A   PL  A+   I  + P F LPE   + + S    D  F      FGG+MELMAV
Sbjct: 27  HVVAMAPPLDGALESSI--AAPQFTLPEFDANQDTSKNSSDFGFTFPGFSFGGSMELMAV 84

Query: 87  PKRKVTPHKRGIRNGPKALKPVPVIIRCK 1
           PKRKVTPHKRGIRNGPKALKP+PVIIRCK
Sbjct: 85  PKRKVTPHKRGIRNGPKALKPIPVIIRCK 113


>gb|AAF87043.1|AC006535_21 T24P13.12 [Arabidopsis thaliana]
          Length = 235

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
 Frame = -3

Query: 252 AHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGAMELMA 91
           +H  A P+PL  A +  I  S+PP VLPE  ++    IE+    F      F G+MELMA
Sbjct: 139 SHVAAMPSPLNGAFDRPI--SMPPLVLPEFDQNQPGLIEEKSFGFGLPSFAFNGSMELMA 196

Query: 90  VPKRKVTPHKRGIRNGPKALKPVPVIIRCK 1
           VPK+K++ HKRGIRNGPKALKPVPVIIRC+
Sbjct: 197 VPKKKISKHKRGIRNGPKALKPVPVIIRCR 226


>gb|AAM60988.1| unknown [Arabidopsis thaliana]
          Length = 134

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
 Frame = -3

Query: 252 AHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGAMELMA 91
           +H  A P+PL  A +  I  S+PP VLPE  ++    IE+    F      F G+MELMA
Sbjct: 25  SHVAAMPSPLNGAFDRPI--SMPPLVLPEFDQNQPGLIEEKSFGFGLPRFAFNGSMELMA 82

Query: 90  VPKRKVTPHKRGIRNGPKALKPVPVIIRCK 1
           VPK+K++ HKRGIRNGPKALKPVPVIIRC+
Sbjct: 83  VPKKKISKHKRGIRNGPKALKPVPVIIRCR 112


>ref|NP_564259.1| ribosomal L.2-like protein [Arabidopsis thaliana]
           gi|16226298|gb|AAL16127.1|AF428295_1 At1g26740/T24P13_11
           [Arabidopsis thaliana] gi|23308289|gb|AAN18114.1|
           At1g26740/T24P13_11 [Arabidopsis thaliana]
           gi|332192605|gb|AEE30726.1| ribosomal L.2-like protein
           [Arabidopsis thaliana]
          Length = 134

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 49/90 (54%), Positives = 61/90 (67%), Gaps = 6/90 (6%)
 Frame = -3

Query: 252 AHSLAQPAPLGTAINHQINNSLPPFVLPEDHEDNNWSIEKPDSPF------FGGAMELMA 91
           +H  A P+PL  A +  I  S+PP VLPE  ++    IE+    F      F G+MELMA
Sbjct: 25  SHVAAMPSPLNGAFDRPI--SMPPLVLPEFDQNQPGLIEEKSFGFGLPSFAFNGSMELMA 82

Query: 90  VPKRKVTPHKRGIRNGPKALKPVPVIIRCK 1
           VPK+K++ HKRGIRNGPKALKPVPVIIRC+
Sbjct: 83  VPKKKISKHKRGIRNGPKALKPVPVIIRCR 112


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