BLASTX nr result

ID: Scutellaria24_contig00004673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004673
         (1774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleop...   227   7e-57
ref|XP_002284786.1| PREDICTED: high mobility group B protein 9 [...   225   3e-56
emb|CAN69112.1| hypothetical protein VITISV_031839 [Vitis vinifera]   225   3e-56
ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|2...   223   1e-55
ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleop...   217   9e-54

>ref|XP_002285907.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa protein
            [Vitis vinifera] gi|302141700|emb|CBI18903.3| unnamed
            protein product [Vitis vinifera]
          Length = 176

 Score =  227 bits (579), Expect = 7e-57
 Identities = 107/162 (66%), Positives = 135/162 (83%)
 Frame = -2

Query: 1479 VPEYNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMRITIRKLDT 1300
            V  YNS+NVKKARL S L ALL DP+L+DVPK+PTLSDVDTL+NLELGSAMRI++ KLD+
Sbjct: 14   VGSYNSNNVKKARLHSTLTALLDDPILADVPKEPTLSDVDTLINLELGSAMRISVIKLDS 73

Query: 1299 TSFEMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSKFCLSYHNEKLLDDSS 1120
            TSF++A++NSATVKDLKLAIKKK+N+ME+SKMGHRHISWKHVW+ FCLSY+N+KL++D S
Sbjct: 74   TSFDVAVLNSATVKDLKLAIKKKINDMEQSKMGHRHISWKHVWANFCLSYYNDKLINDGS 133

Query: 1119 SLQDYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLNSK 994
            +LQD+GI NNS+V F+P+++             R F GLN +
Sbjct: 134  ALQDFGIHNNSQVHFVPFIMSKGSQRHSRRRKHRFFHGLNKR 175


>ref|XP_002284786.1| PREDICTED: high mobility group B protein 9 [Vitis vinifera]
           gi|302141699|emb|CBI18902.3| unnamed protein product
           [Vitis vinifera]
          Length = 324

 Score =  225 bits (574), Expect = 3e-56
 Identities = 124/246 (50%), Positives = 153/246 (62%), Gaps = 29/246 (11%)
 Frame = +1

Query: 1   NLHVLYIEVTRRGGYNKVVSEKKWREISGVFEFSAKTTSASYALRKHXXXXXXXXXXXXX 180
           NL+VLY+EVTRRGGY+KVV +KKWRE+S VF FS  TTSASY LRKH             
Sbjct: 63  NLYVLYVEVTRRGGYHKVVMDKKWREVSSVFNFSPTTTSASYVLRKHYYNILRKYERAYF 122

Query: 181 XRIQP-----SIPI--------------NHTGPP---SFQAIGTIDAKLDCGYLVSVKLG 294
            +  P     SIP+              N + PP      A+GTI+AK DCGYLVSVK+G
Sbjct: 123 LKGPPLNATASIPVSDLSNLQQTADARRNASNPPIGAPILAVGTINAKFDCGYLVSVKMG 182

Query: 295 NETLNGVLYHPGYPNA-------PPTTSTTIVPYTXXXXXXXXXXXXXXXXXXXXSGYNF 453
           +ETL+GVLYHPG P++         T S T++                       SGYNF
Sbjct: 183 SETLSGVLYHPGQPSSYTPIRTSNTTASQTLITNKAARKKKRKRGGEPGRPKPNRSGYNF 242

Query: 454 FFAEKHSMFKSLYPNREREFTKMIGEAWNSLSPEERVVYQNHGLKDKERYQNELKEYKEK 633
           FF+EKH++FKSLYP+REREFTKMIGE+W+SLS EE+ VYQ  G+KDKERY+ E+KEYKE+
Sbjct: 243 FFSEKHALFKSLYPDREREFTKMIGESWSSLSLEEKEVYQKLGIKDKERYKKEMKEYKER 302

Query: 634 LKMGQQ 651
           +   QQ
Sbjct: 303 MGAVQQ 308


>emb|CAN69112.1| hypothetical protein VITISV_031839 [Vitis vinifera]
          Length = 324

 Score =  225 bits (574), Expect = 3e-56
 Identities = 125/246 (50%), Positives = 154/246 (62%), Gaps = 29/246 (11%)
 Frame = +1

Query: 1   NLHVLYIEVTRRGGYNKVVSEKKWREISGVFEFSAKTTSASYALRKHXXXXXXXXXXXXX 180
           NL+VLY+EVTRRGGY+KVV +KKWRE+S VF FS  TTSASY LRKH             
Sbjct: 63  NLYVLYVEVTRRGGYHKVVMDKKWREVSSVFNFSPTTTSASYVLRKHYYNILRKYERAYF 122

Query: 181 XRIQP-----SIPI--------------NHTGPP---SFQAIGTIDAKLDCGYLVSVKLG 294
            +  P     SIP+              N + PP      A+GTI+AK DCGYLVSVK+G
Sbjct: 123 LKGPPLNATASIPVSDLSNLQQTADARRNASNPPIGAPILAVGTINAKFDCGYLVSVKMG 182

Query: 295 NETLNGVLYHPGYPNA-------PPTTSTTIVPYTXXXXXXXXXXXXXXXXXXXXSGYNF 453
           +ETL+GVLYHPG P++         T S T++                       SGYNF
Sbjct: 183 SETLSGVLYHPGQPSSYTPIRTSNTTASQTLITNKAARXKKRKRGGEPGRPKPNRSGYNF 242

Query: 454 FFAEKHSMFKSLYPNREREFTKMIGEAWNSLSPEERVVYQNHGLKDKERYQNELKEYKEK 633
           FF+EKH++FKSLYP+REREFTKMIGE+W+SLS EE+ VYQ  G+KDKERY+ E+KEYKE+
Sbjct: 243 FFSEKHALFKSLYPDREREFTKMIGESWSSLSLEEKEVYQKLGIKDKERYKKEMKEYKER 302

Query: 634 LKMGQQ 651
           +   QQ
Sbjct: 303 MGAVQQ 308


>ref|XP_002301940.1| predicted protein [Populus trichocarpa] gi|222843666|gb|EEE81213.1|
            predicted protein [Populus trichocarpa]
          Length = 173

 Score =  223 bits (569), Expect = 1e-55
 Identities = 112/171 (65%), Positives = 137/171 (80%)
 Frame = -2

Query: 1503 SNSTALNSVPEYNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMR 1324
            S+S   + V  YNSSNVKKA+L+S L ALL DP+LSDVPKKPTLSDVDTL++LE+GSAMR
Sbjct: 3    SSSKGEDEVGGYNSSNVKKAKLQSTLAALLDDPILSDVPKKPTLSDVDTLISLEMGSAMR 62

Query: 1323 ITIRKLDTTSFEMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSKFCLSYHN 1144
            I+++KLD TSF++A+MNSATVKDLKLAIK+K+ EME+SKMGHRHISWK VW+ F LSYHN
Sbjct: 63   ISVQKLDGTSFDVALMNSATVKDLKLAIKRKLIEMEQSKMGHRHISWKKVWANFALSYHN 122

Query: 1143 EKLLDDSSSLQDYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLNSKS 991
            +KLLDD+S+LQD GIRNNS+V F  YV+             R F GLN ++
Sbjct: 123  QKLLDDNSALQDSGIRNNSQVHFASYVMSKDSQRHSKRRKHRFFHGLNKRA 173


>ref|XP_004145525.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 25 kDa
            protein-like [Cucumis sativus]
          Length = 181

 Score =  217 bits (552), Expect = 9e-54
 Identities = 107/157 (68%), Positives = 128/157 (81%)
 Frame = -2

Query: 1470 YNSSNVKKARLESALVALLADPLLSDVPKKPTLSDVDTLVNLELGSAMRITIRKLDTTSF 1291
            Y+S+NVKK RL S L ALL DP+L+DVPK PTLS VDTL++LELGSAMRI++ KLD T+ 
Sbjct: 22   YHSNNVKKVRLNSTLAALLDDPILADVPKNPTLSHVDTLISLELGSAMRISVLKLDGTAI 81

Query: 1290 EMAMMNSATVKDLKLAIKKKVNEMEESKMGHRHISWKHVWSKFCLSYHNEKLLDDSSSLQ 1111
            ++ +MNSAT+KDLKLAIKKKVNEME+SKMGHRHISWKHVW+ FCL++ NEKLLDDSS LQ
Sbjct: 82   DVVIMNSATLKDLKLAIKKKVNEMEQSKMGHRHISWKHVWANFCLAHLNEKLLDDSSVLQ 141

Query: 1110 DYGIRNNSEVQFIPYVVXXXXXXXXXXXXXRIFRGLN 1000
            D+GIRNNS+V+FIPYV+             R F GLN
Sbjct: 142  DFGIRNNSQVRFIPYVMSKSSRTHSRRRKHRFFHGLN 178


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