BLASTX nr result
ID: Scutellaria24_contig00004649
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00004649
(2534 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhodode... 1487 0.0
gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrh... 1487 0.0
ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, puta... 1486 0.0
ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 ... 1476 0.0
ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II su... 1471 0.0
>gb|AAZ08457.1| RNA polymerase II second largest subunit [Rhododendron macrophyllum]
Length = 1191
Score = 1487 bits (3849), Expect = 0.0
Identities = 734/796 (92%), Positives = 751/796 (94%)
Frame = +1
Query: 1 LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 180
LGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA
Sbjct: 404 LGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 463
Query: 181 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 360
GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC
Sbjct: 464 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 523
Query: 361 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNP 540
GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+P
Sbjct: 524 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDP 583
Query: 541 DMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIR 720
DMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIK+KDI+
Sbjct: 584 DMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKRKDIQ 643
Query: 721 ALQQRESPEDDGTVXXXXXXWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLVSAREKPEEA 900
ALQQRE+PED G WHDLVAKGF NDLVSAR PEEA
Sbjct: 644 ALQQRETPEDGG--------WHDLVAKGFIEYIDTEEEETTMISMTINDLVSARLNPEEA 695
Query: 901 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 1080
YS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDT+A
Sbjct: 696 YSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTVA 755
Query: 1081 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 1260
YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS
Sbjct: 756 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 815
Query: 1261 LFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 1440
LFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDV+IG
Sbjct: 816 LFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVVIG 875
Query: 1441 KTSPMAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 1620
KT+P+A DEAQG AARYT+RDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ
Sbjct: 876 KTTPIAQDEAQGPAARYTRRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 935
Query: 1621 IGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPSRMTIGQLIECVMGKVA 1800
IGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVA
Sbjct: 936 IGDKFSSRHGQKGTVGMTYTQEDMPWTMEGITPDIIVNPHAIPSRMTIGQLIECIMGKVA 995
Query: 1801 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRL 1980
AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRL
Sbjct: 996 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRL 1055
Query: 1981 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 2160
KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS
Sbjct: 1056 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 1115
Query: 2161 DAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 2340
DAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRM
Sbjct: 1116 DAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRM 1175
Query: 2341 LTKDIKLNKEQKKKGA 2388
LTKD+K K++KKK A
Sbjct: 1176 LTKDVKQAKDKKKKQA 1191
>gb|AAY89348.1| RNA polymerase II second largest subunit [Antirrhinum majus]
Length = 1200
Score = 1487 bits (3849), Expect = 0.0
Identities = 733/796 (92%), Positives = 753/796 (94%)
Frame = +1
Query: 1 LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 180
LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQF IKAKTITSGLKYSLATGNWGQANAA
Sbjct: 413 LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFXIKAKTITSGLKYSLATGNWGQANAA 472
Query: 181 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 360
GTRAGVSQVLNRLTYASTLSHLRRL+SPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC
Sbjct: 473 GTRAGVSQVLNRLTYASTLSHLRRLBSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 532
Query: 361 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNP 540
GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHRNP
Sbjct: 533 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGLWVGIHRNP 592
Query: 541 DMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIR 720
DMLVST VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKD++
Sbjct: 593 DMLVSTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDVQ 652
Query: 721 ALQQRESPEDDGTVXXXXXXWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLVSAREKPEEA 900
ALQQRESP+D G WH+LVAKGF NDL+SA+ P EA
Sbjct: 653 ALQQRESPDDGG--------WHELVAKGFIEYIDTEEEETTMISMTINDLLSAKVNPTEA 704
Query: 901 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 1080
YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA
Sbjct: 705 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 764
Query: 1081 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 1260
YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS
Sbjct: 765 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 824
Query: 1261 LFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 1440
LFFRSYRDEEKKMGTLVKEDFGRPDR+NTMGMRHGSYDKLDDDGLAPPGTR SGEDVIIG
Sbjct: 825 LFFRSYRDEEKKMGTLVKEDFGRPDRSNTMGMRHGSYDKLDDDGLAPPGTRCSGEDVIIG 884
Query: 1441 KTSPMAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 1620
KT+P++PD+AQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ
Sbjct: 885 KTTPISPDDAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 944
Query: 1621 IGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPSRMTIGQLIECVMGKVA 1800
IGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVA
Sbjct: 945 IGDKFSSRHGQKGTVGMTYTQEDMPWTVEGISPDIIVNPHAIPSRMTIGQLIECIMGKVA 1004
Query: 1801 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRL 1980
AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL+SMIFLGPTYYQRL
Sbjct: 1005 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSSMIFLGPTYYQRL 1064
Query: 1981 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 2160
KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS
Sbjct: 1065 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 1124
Query: 2161 DAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 2340
DAYRIHVCE+CGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELM+MAIAPRM
Sbjct: 1125 DAYRIHVCEQCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMSMAIAPRM 1184
Query: 2341 LTKDIKLNKEQKKKGA 2388
LTKDIK +KEQ+KK A
Sbjct: 1185 LTKDIKQSKEQRKKAA 1200
>ref|XP_002519060.1| DNA-directed RNA polymerase II subunit, putative [Ricinus communis]
gi|223541723|gb|EEF43271.1| DNA-directed RNA polymerase
II subunit, putative [Ricinus communis]
Length = 1194
Score = 1486 bits (3846), Expect = 0.0
Identities = 734/796 (92%), Positives = 750/796 (94%)
Frame = +1
Query: 1 LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 180
LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA
Sbjct: 407 LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 466
Query: 181 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 360
GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC
Sbjct: 467 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 526
Query: 361 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNP 540
GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHR+P
Sbjct: 527 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRDP 586
Query: 541 DMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIR 720
DMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRLLIKKKDI
Sbjct: 587 DMLVKTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLLIKKKDIH 646
Query: 721 ALQQRESPEDDGTVXXXXXXWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLVSAREKPEEA 900
ALQQRES E+ G WHDLVAKGF +DLV AR PEEA
Sbjct: 647 ALQQRESSEEGG--------WHDLVAKGFIEYIDTEEEETTMISMTIHDLVQARINPEEA 698
Query: 901 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 1080
YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA
Sbjct: 699 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 758
Query: 1081 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 1260
YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS
Sbjct: 759 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 818
Query: 1261 LFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 1440
LFFRSYRDEEKKMGTLVKEDFGRPDR NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG
Sbjct: 819 LFFRSYRDEEKKMGTLVKEDFGRPDRANTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 878
Query: 1441 KTSPMAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 1620
KT+P+A +EAQGQ+ARYT+RDHS SLRHSETG+VDQVLLTTNADGLRFVKVRVRSVRIPQ
Sbjct: 879 KTTPIAQEEAQGQSARYTRRDHSISLRHSETGIVDQVLLTTNADGLRFVKVRVRSVRIPQ 938
Query: 1621 IGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPSRMTIGQLIECVMGKVA 1800
IGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVA
Sbjct: 939 IGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVA 998
Query: 1801 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRL 1980
AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLT+MIFLGPTYYQRL
Sbjct: 999 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRL 1058
Query: 1981 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 2160
KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS
Sbjct: 1059 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 1118
Query: 2161 DAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 2340
DAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM
Sbjct: 1119 DAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1178
Query: 2341 LTKDIKLNKEQKKKGA 2388
LTKD+K K+QKKKGA
Sbjct: 1179 LTKDVKPTKDQKKKGA 1194
>ref|NP_001233889.1| DNA-directed RNA polymerase II subunit RPB2 [Solanum lycopersicum]
gi|11134656|sp|Q42877.1|RPB2_SOLLC RecName:
Full=DNA-directed RNA polymerase II subunit RPB2;
Short=RNA polymerase II subunit 2; Short=RNA polymerase
II subunit B2; AltName: Full=DNA-directed RNA polymerase
II 135 kDa polypeptide gi|1049068|gb|AAC49273.1| RNA
polymerase II subunit 2 [Solanum lycopersicum]
Length = 1191
Score = 1476 bits (3821), Expect = 0.0
Identities = 726/796 (91%), Positives = 750/796 (94%)
Frame = +1
Query: 1 LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 180
LGGLFRMLFRKLTRDVR YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA
Sbjct: 404 LGGLFRMLFRKLTRDVRGYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 463
Query: 181 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 360
GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC
Sbjct: 464 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 523
Query: 361 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNP 540
GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNG WVGIHR+P
Sbjct: 524 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGTWVGIHRDP 583
Query: 541 DMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIR 720
DMLV T VDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIV+KQRL+IKKKDI+
Sbjct: 584 DMLVRTLRRLRRRVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVEKQRLMIKKKDIQ 643
Query: 721 ALQQRESPEDDGTVXXXXXXWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLVSAREKPEEA 900
LQQRESP++ G WHDLVAKG+ NDLV AR P +A
Sbjct: 644 TLQQRESPDEGG--------WHDLVAKGYIEYIDTEEEETTMISMTINDLVQARLNPGDA 695
Query: 901 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 1080
YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA
Sbjct: 696 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 755
Query: 1081 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 1260
YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAI+CYSGYNQEDSVIMNQSSIDRGFFRS
Sbjct: 756 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAISCYSGYNQEDSVIMNQSSIDRGFFRS 815
Query: 1261 LFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 1440
LFFRSYRDEEKKMGTLVKEDFGRPDR +TMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG
Sbjct: 816 LFFRSYRDEEKKMGTLVKEDFGRPDRASTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 875
Query: 1441 KTSPMAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 1620
KT+P++ D+AQGQA+RYT++DHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ
Sbjct: 876 KTTPISQDDAQGQASRYTRKDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 935
Query: 1621 IGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPSRMTIGQLIECVMGKVA 1800
IGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVA
Sbjct: 936 IGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVA 995
Query: 1801 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRL 1980
AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRL++MIFLGPTYYQRL
Sbjct: 996 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLSAMIFLGPTYYQRL 1055
Query: 1981 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 2160
KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS
Sbjct: 1056 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 1115
Query: 2161 DAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 2340
DAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM
Sbjct: 1116 DAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1175
Query: 2341 LTKDIKLNKEQKKKGA 2388
LTKD+KL K+QKKKGA
Sbjct: 1176 LTKDVKLAKDQKKKGA 1191
>ref|XP_002274051.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB2 [Vitis
vinifera] gi|147841183|emb|CAN72948.1| hypothetical
protein VITISV_033708 [Vitis vinifera]
gi|302143287|emb|CBI21848.3| unnamed protein product
[Vitis vinifera]
Length = 1193
Score = 1471 bits (3807), Expect = 0.0
Identities = 722/796 (90%), Positives = 749/796 (94%)
Frame = +1
Query: 1 LGGLFRMLFRKLTRDVRSYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 180
LGGLFRMLFRKLTRDVR+YVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA
Sbjct: 406 LGGLFRMLFRKLTRDVRAYVQKCVDNGKDVNLQFAIKAKTITSGLKYSLATGNWGQANAA 465
Query: 181 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSQWGMMCPAETPEGQAC 360
GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNS WGMMCPAETPEGQAC
Sbjct: 466 GTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQLHNSHWGMMCPAETPEGQAC 525
Query: 361 GLVKNLALMVYITVGSAAYPILEFLEEWGTENFEEISPAVIPQATKIFVNGCWVGIHRNP 540
GLVKNLALMVYITVGSAA PILEFLEEW TENFEEISPAVIPQ+TKIFVNGCWVGIHRNP
Sbjct: 526 GLVKNLALMVYITVGSAANPILEFLEEWSTENFEEISPAVIPQSTKIFVNGCWVGIHRNP 585
Query: 541 DMLVSTXXXXXXXVDVNTEVGVVRDIRLKELRIYTDYGRCSRPLFIVDKQRLLIKKKDIR 720
D+LV T VDVNTEVGV+RDIRLKELR+YTDYGRCSRPLFIV+KQRLLIKK+DIR
Sbjct: 586 DLLVKTLRQLRRQVDVNTEVGVIRDIRLKELRLYTDYGRCSRPLFIVEKQRLLIKKRDIR 645
Query: 721 ALQQRESPEDDGTVXXXXXXWHDLVAKGFXXXXXXXXXXXXXXXXXXNDLVSAREKPEEA 900
ALQ RESPED G WHDLV+KGF NDL+SAR PEEA
Sbjct: 646 ALQLRESPEDGG--------WHDLVSKGFIEYVDTEEEETTMISMTINDLISARLNPEEA 697
Query: 901 YSDTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQFRMDTLA 1080
YS+TYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQ RMDTLA
Sbjct: 698 YSETYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVTNYQLRMDTLA 757
Query: 1081 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 1260
YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS
Sbjct: 758 YVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQSSIDRGFFRS 817
Query: 1261 LFFRSYRDEEKKMGTLVKEDFGRPDRTNTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 1440
LFFRSYRDEEKKMGTLVKEDFGRP+R NTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG
Sbjct: 818 LFFRSYRDEEKKMGTLVKEDFGRPNRENTMGMRHGSYDKLDDDGLAPPGTRVSGEDVIIG 877
Query: 1441 KTSPMAPDEAQGQAARYTKRDHSTSLRHSETGMVDQVLLTTNADGLRFVKVRVRSVRIPQ 1620
KT+P++ D++QGQA+RYT+RDHSTSLRHSE+GMVDQVLLTTNADGLRFVKVR+RSVRIPQ
Sbjct: 878 KTTPISQDDSQGQASRYTRRDHSTSLRHSESGMVDQVLLTTNADGLRFVKVRMRSVRIPQ 937
Query: 1621 IGDKFSSRHGQKGTVGMTYTQEDMPWTLEGICPDIIVNPHAIPSRMTIGQLIECVMGKVA 1800
IGDKFSSRHGQKGTVGMTYTQEDMPWT+EGI PDIIVNPHAIPSRMTIGQLIEC+MGKVA
Sbjct: 938 IGDKFSSRHGQKGTVGMTYTQEDMPWTVEGITPDIIVNPHAIPSRMTIGQLIECIMGKVA 997
Query: 1801 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTSMIFLGPTYYQRL 1980
AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLT+MIFLGPTYYQRL
Sbjct: 998 AHMGKEGDATPFTDVTVDNISKALHKCGYQMRGFETMYNGHTGRRLTAMIFLGPTYYQRL 1057
Query: 1981 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 2160
KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS
Sbjct: 1058 KHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAHFLKERLFDQS 1117
Query: 2161 DAYRIHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 2340
DAYR+HVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM
Sbjct: 1118 DAYRVHVCERCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQELMAMAIAPRM 1177
Query: 2341 LTKDIKLNKEQKKKGA 2388
LTK++K K+QKKKGA
Sbjct: 1178 LTKEVKPPKDQKKKGA 1193