BLASTX nr result

ID: Scutellaria24_contig00004611 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004611
         (1033 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251...   301   2e-79
ref|XP_002309368.1| predicted protein [Populus trichocarpa] gi|2...   294   3e-77
ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795...   288   1e-75
ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|3...   287   3e-75
ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]   286   6e-75

>ref|XP_002273237.1| PREDICTED: uncharacterized protein LOC100251872 [Vitis vinifera]
            gi|297743697|emb|CBI36580.3| unnamed protein product
            [Vitis vinifera]
          Length = 357

 Score =  301 bits (770), Expect = 2e-79
 Identities = 136/195 (69%), Positives = 159/195 (81%)
 Frame = -3

Query: 1031 RRVYDSNGLVSYSSVKWASPVEFVTGSFGFGLHWWDQRKPGGPVALFKDNWTRGNGSGIV 852
            RRV+DS+GLVSY++ KWASP EF TG FGFGL WWD RKPGGPV+ FK NW +   SGIV
Sbjct: 163  RRVWDSDGLVSYTAAKWASPTEFATGGFGFGLQWWDLRKPGGPVSQFKGNWAQRTTSGIV 222

Query: 851  HSIDIHPSRKHTCLAGGSSGVVFAWDIRWPREPVILSGVGIGDAPPNSLVESDIWEIHYD 672
            HSIDIHPSRKHTCLAGGS G VFAWD+RW ++P+ILSGVG  +   +S  ES++WE+ YD
Sbjct: 223  HSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQPIILSGVGTSEVATHSPCESEVWEVKYD 282

Query: 671  NYTHXXXXXXXXXSRVLPAMICSEDGILAVIEQGEEPVELLAEPCAINSFDIDKQNPSDV 492
             Y           SR+LPAM+CSEDGILAV+EQGEEP+ELLAEPCAINSFDID+QNPSDV
Sbjct: 283  PYMRTSNFGNMSSSRILPAMLCSEDGILAVVEQGEEPIELLAEPCAINSFDIDRQNPSDV 342

Query: 491  ICSLEWESVVIITRP 447
            ICSLEWES+ I++RP
Sbjct: 343  ICSLEWESIAILSRP 357


>ref|XP_002309368.1| predicted protein [Populus trichocarpa] gi|222855344|gb|EEE92891.1|
            predicted protein [Populus trichocarpa]
          Length = 360

 Score =  294 bits (752), Expect = 3e-77
 Identities = 140/195 (71%), Positives = 157/195 (80%)
 Frame = -3

Query: 1031 RRVYDSNGLVSYSSVKWASPVEFVTGSFGFGLHWWDQRKPGGPVALFKDNWTRGNGSGIV 852
            RRV+D NGLVSYS+VKWASP EFVTG  GFGL WWD R+PG  VA FK +W RG  SGI+
Sbjct: 167  RRVFDGNGLVSYSAVKWASPSEFVTGGCGFGLQWWDLRQPGAAVAQFKGSWDRGTTSGII 226

Query: 851  HSIDIHPSRKHTCLAGGSSGVVFAWDIRWPREPVILSGVGIGDAPPNSLVESDIWEIHYD 672
            HSIDIHPSRKHTCLAGGSSG VFAWD+R  +EP+ILS +G  D     L ES++WE+ YD
Sbjct: 227  HSIDIHPSRKHTCLAGGSSGTVFAWDLRRQQEPIILSSIGSSDTMTQPLSESEVWEVQYD 286

Query: 671  NYTHXXXXXXXXXSRVLPAMICSEDGILAVIEQGEEPVELLAEPCAINSFDIDKQNPSDV 492
             YT          SR+LPAMICSEDGILAVIEQGEEP ELLAEPCAINSFDID+QNPSDV
Sbjct: 287  YYT-KSLNSNISSSRILPAMICSEDGILAVIEQGEEPTELLAEPCAINSFDIDRQNPSDV 345

Query: 491  ICSLEWESVVIITRP 447
            ICSLEWES+VI++RP
Sbjct: 346  ICSLEWESIVILSRP 360


>ref|XP_003518229.1| PREDICTED: uncharacterized protein LOC100795073 [Glycine max]
          Length = 346

 Score =  288 bits (737), Expect = 1e-75
 Identities = 132/194 (68%), Positives = 156/194 (80%)
 Frame = -3

Query: 1031 RRVYDSNGLVSYSSVKWASPVEFVTGSFGFGLHWWDQRKPGGPVALFKDNWTRGNGSGIV 852
            RR++DS GLVSY++V+WASP+EF TG FGFGL WWDQRKPGGPV+ FK NW +   SGIV
Sbjct: 156  RRLFDSAGLVSYTAVRWASPMEFATGGFGFGLQWWDQRKPGGPVSQFKGNWDKKLTSGIV 215

Query: 851  HSIDIHPSRKHTCLAGGSSGVVFAWDIRWPREPVILSGVGIGDAPPNSLVESDIWEIHYD 672
            HSIDIHPSRKHTCLAGGS G VFAWD+RW ++P+ILSG G  +    S+ ES++WE+ YD
Sbjct: 216  HSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQPIILSGAGAANTAVQSISESEVWEVQYD 275

Query: 671  NYTHXXXXXXXXXSRVLPAMICSEDGILAVIEQGEEPVELLAEPCAINSFDIDKQNPSDV 492
                         +R+LP+MICSEDGIL VIEQGEEP+ELLAEPCAINSFDID+ NPSDV
Sbjct: 276  R----CIKSNTSSTRILPSMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNPSDV 331

Query: 491  ICSLEWESVVIITR 450
            ICSLEWE+V I+TR
Sbjct: 332  ICSLEWEAVAILTR 345


>ref|XP_003610262.1| Nucleoporin Nup43 [Medicago truncatula] gi|355511317|gb|AES92459.1|
            Nucleoporin Nup43 [Medicago truncatula]
          Length = 351

 Score =  287 bits (735), Expect = 3e-75
 Identities = 136/198 (68%), Positives = 155/198 (78%), Gaps = 4/198 (2%)
 Frame = -3

Query: 1031 RRVYDSNGLVSYSSVKWASPVEFVTGSFGFGLHWWDQRKPGGPVALFKDNWTRGNGSGIV 852
            RR++DS GLVSY+SVKWASPVEF TG +GFGLHWWDQRKPGGPV+ FK NW +   SGIV
Sbjct: 157  RRLFDSGGLVSYTSVKWASPVEFATGGYGFGLHWWDQRKPGGPVSQFKGNWDKNLNSGIV 216

Query: 851  HSIDIHPSRKHTCLAGGSSGVVFAWDIRWPREPVILSGVGIGDAPPN----SLVESDIWE 684
            HSIDIHPSRKHTCLA GS G V AWD+R  ++P+ILSG G GD   N    S+ ES++WE
Sbjct: 217  HSIDIHPSRKHTCLAAGSLGTVLAWDLRMQQQPIILSGTGAGDGAGNTAVQSISESEVWE 276

Query: 683  IHYDNYTHXXXXXXXXXSRVLPAMICSEDGILAVIEQGEEPVELLAEPCAINSFDIDKQN 504
            + YD             +R+LPAMICSEDGIL VIEQGEEP+ELLAEPCAINSFDID+ N
Sbjct: 277  VQYDR----CIKSNTSSTRILPAMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHN 332

Query: 503  PSDVICSLEWESVVIITR 450
            P DVICSLEWESV I+TR
Sbjct: 333  PLDVICSLEWESVAILTR 350


>ref|XP_003549530.1| PREDICTED: nucleoporin Nup43-like [Glycine max]
          Length = 347

 Score =  286 bits (732), Expect = 6e-75
 Identities = 133/197 (67%), Positives = 157/197 (79%), Gaps = 3/197 (1%)
 Frame = -3

Query: 1031 RRVYDSNGLVSYSSVKWASPVEFVTGSFGFGLHWWDQRKPGGPVALFKDNWTRGNGSGIV 852
            RR++DS GLVSY++V WASP+EF TG +GFGLHWWDQRKPGGPV+ FK NW +   SGIV
Sbjct: 154  RRLFDSAGLVSYTAVSWASPMEFATGGYGFGLHWWDQRKPGGPVSQFKGNWDKKLTSGIV 213

Query: 851  HSIDIHPSRKHTCLAGGSSGVVFAWDIRWPREPVILSGVGI---GDAPPNSLVESDIWEI 681
            HSIDIHPSRKHTCLAGGS G VFAWD+RW ++P+ILSG G    G+    S+ ES++WE+
Sbjct: 214  HSIDIHPSRKHTCLAGGSLGTVFAWDLRWQQQPIILSGAGAGAGGNTAVQSISESEVWEV 273

Query: 680  HYDNYTHXXXXXXXXXSRVLPAMICSEDGILAVIEQGEEPVELLAEPCAINSFDIDKQNP 501
             YD             +R+LP+MICSEDGIL VIEQGEEP+ELLAEPCAINSFDID+ NP
Sbjct: 274  QYDR----CIKPNTSSTRILPSMICSEDGILGVIEQGEEPIELLAEPCAINSFDIDRHNP 329

Query: 500  SDVICSLEWESVVIITR 450
            SDVICSLEWE+V I+TR
Sbjct: 330  SDVICSLEWEAVAILTR 346


Top