BLASTX nr result

ID: Scutellaria24_contig00004359 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004359
         (1247 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Rici...   199   9e-49
ref|XP_002321601.1| predicted protein [Populus trichocarpa] gi|2...   194   5e-47
gb|ABA40429.1| unknown [Solanum tuberosum]                            193   9e-47
ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosoma...   191   4e-46
ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloro...   190   7e-46

>ref|XP_002511394.1| 50S ribosomal protein L7/L12, putative [Ricinus communis]
           gi|223550509|gb|EEF51996.1| 50S ribosomal protein
           L7/L12, putative [Ricinus communis]
          Length = 193

 Score =  199 bits (507), Expect = 9e-49
 Identities = 111/171 (64%), Positives = 123/171 (71%), Gaps = 6/171 (3%)
 Frame = -2

Query: 826 LQYRCLQTDIAPTDPKDMPMKYKYPAVYDPYGPRPPPSDKIVQLAENIASLTVEERNQIY 647
           LQ R  Q D  P DPK  P KYKYPA YDPYGPRPPPSDKIVQLAE IA+L  EER QI 
Sbjct: 23  LQVRFFQHDFVPRDPKINPRKYKYPAFYDPYGPRPPPSDKIVQLAERIAALPPEERRQIG 82

Query: 646 PTLVYKVMTPKHEQKAV----LGAQ--VXXXXXXXXXXXXKTTFNVKLEKFDAASKLKVI 485
           PTL YK+  PK +  +     LGAQ               KT F+VKLEKFDAA+K+KVI
Sbjct: 83  PTLHYKLNHPKLQTISTEGMDLGAQGSQAAVAAKVEEKKEKTAFDVKLEKFDAAAKIKVI 142

Query: 484 KEIRSFTELGLKEAKDLVEKAPVILKQQVTKDEANSIIEKIKAVGGVAVME 332
           KE+R+FT LGLKEAKDLVEKAP +LKQ VTK+EAN IIEKIKA GGVA+ME
Sbjct: 143 KEVRAFTNLGLKEAKDLVEKAPAVLKQGVTKEEANDIIEKIKAAGGVAIME 193


>ref|XP_002321601.1| predicted protein [Populus trichocarpa] gi|222868597|gb|EEF05728.1|
           predicted protein [Populus trichocarpa]
          Length = 195

 Score =  194 bits (492), Expect = 5e-47
 Identities = 109/196 (55%), Positives = 127/196 (64%), Gaps = 9/196 (4%)
 Frame = -2

Query: 892 MKLATIYR--CARGHPIMHGKNNFLQYRCLQTDIAPTDPKDMPMKYKYPAVYDPYGPRPP 719
           MK   + R  CA  HP +      LQ R  Q D  P DPK  P KYKYP  YDPYGPRPP
Sbjct: 1   MKFIALARSVCAH-HPALREITGPLQVRYFQHDFVPRDPKTKPKKYKYPLYYDPYGPRPP 59

Query: 718 PSDKIVQLAENIASLTVEERNQIYPTLVYKVMTPKHEQKAV-------LGAQVXXXXXXX 560
           PS+KI+++AE IA+L  EER+QI   L YK+  PK +  +         G +        
Sbjct: 60  PSEKIIEIAERIAALPPEERSQIGSALGYKLKHPKLQPISTEGMGLGSQGGEAAAGAAKV 119

Query: 559 XXXXXKTTFNVKLEKFDAASKLKVIKEIRSFTELGLKEAKDLVEKAPVILKQQVTKDEAN 380
                KT F+VKLEKFDAA+K+KVIKE+R+FT LGLKEAKDLVEK P +LKQ VTKDEAN
Sbjct: 120 EEKKEKTAFDVKLEKFDAAAKIKVIKEVRAFTNLGLKEAKDLVEKVPCVLKQGVTKDEAN 179

Query: 379 SIIEKIKAVGGVAVME 332
            IIEKIKA GGVAVME
Sbjct: 180 GIIEKIKAAGGVAVME 195


>gb|ABA40429.1| unknown [Solanum tuberosum]
          Length = 194

 Score =  193 bits (490), Expect = 9e-47
 Identities = 107/172 (62%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
 Frame = -2

Query: 826 LQYRCLQTDIAPTDPKDMPMKYKYPAVYDPYGPRPPPSDKIVQLAENIASLTVEERNQIY 647
           LQ R  Q D  P DP   P++YKYPA YDPYGPRPPPSDKIVQLAE IA+L  EER QI 
Sbjct: 23  LQSRSFQPDFVPRDPNAKPIRYKYPAAYDPYGPRPPPSDKIVQLAERIAALAPEERRQIG 82

Query: 646 PTLVYKVMTPKHEQKAV-------LGAQVXXXXXXXXXXXXKTTFNVKLEKFDAASKLKV 488
           P L   +  P  +Q +V       +G               KT F+VKLEKFDAA+K+KV
Sbjct: 83  PLLREILRHPNLKQISVEGMDLGAIGGAGGGPAKAEEKKVEKTAFDVKLEKFDAAAKIKV 142

Query: 487 IKEIRSFTELGLKEAKDLVEKAPVILKQQVTKDEANSIIEKIKAVGGVAVME 332
           IKE+RSFT LGLKEAK+LVEKAP ILKQ VTK+EAN IIEKIKAVGGVAVME
Sbjct: 143 IKEVRSFTSLGLKEAKELVEKAPAILKQGVTKEEANEIIEKIKAVGGVAVME 194


>ref|XP_004170687.1| PREDICTED: LOW QUALITY PROTEIN: 50S ribosomal protein L12,
           chloroplastic-like [Cucumis sativus]
          Length = 193

 Score =  191 bits (484), Expect = 4e-46
 Identities = 103/170 (60%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
 Frame = -2

Query: 823 QYRCLQTDIAPTDPKDMPMKYKYPAVYDPYGPRPPPSDKIVQLAENIASLTVEERNQIYP 644
           Q R  Q D  P DP   P KYKYPA YDPYGPRPPPSDKI++LAE I +L   ER QI P
Sbjct: 24  QVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPSDKIIELAERIVALPAAERCQIGP 83

Query: 643 TLVYKVMTPKHEQKAVLGAQVXXXXXXXXXXXXK------TTFNVKLEKFDAASKLKVIK 482
           TL  K+  PK ++ +V G  +                   T F+VKLEKFDAASK+KVIK
Sbjct: 84  TLXRKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIK 143

Query: 481 EIRSFTELGLKEAKDLVEKAPVILKQQVTKDEANSIIEKIKAVGGVAVME 332
           E+R+FT LGLKEAKDLVEK P ILKQ VTK+EAN IIEKIKA GGVAVME
Sbjct: 144 EVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIEKIKAAGGVAVME 193


>ref|XP_004152013.1| PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Cucumis
           sativus]
          Length = 193

 Score =  190 bits (482), Expect = 7e-46
 Identities = 103/170 (60%), Positives = 116/170 (68%), Gaps = 6/170 (3%)
 Frame = -2

Query: 823 QYRCLQTDIAPTDPKDMPMKYKYPAVYDPYGPRPPPSDKIVQLAENIASLTVEERNQIYP 644
           Q R  Q D  P DP   P KYKYPA YDPYGPRPPPSDKI++LAE I +L   ER QI P
Sbjct: 24  QVRFFQPDFTPRDPNAKPKKYKYPAFYDPYGPRPPPSDKIIELAERIVALPAAERCQIGP 83

Query: 643 TLVYKVMTPKHEQKAVLGAQVXXXXXXXXXXXXK------TTFNVKLEKFDAASKLKVIK 482
           TL  K+  PK ++ +V G  +                   T F+VKLEKFDAASK+KVIK
Sbjct: 84  TLGEKLRHPKLQEISVDGLDMGPEGGAAAGSSNVEEKKEKTAFDVKLEKFDAASKIKVIK 143

Query: 481 EIRSFTELGLKEAKDLVEKAPVILKQQVTKDEANSIIEKIKAVGGVAVME 332
           E+R+FT LGLKEAKDLVEK P ILKQ VTK+EAN IIEKIKA GGVAVME
Sbjct: 144 EVRAFTNLGLKEAKDLVEKVPAILKQGVTKEEANGIIEKIKAAGGVAVME 193


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