BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004308
         (1037 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O80360.1|RK3_TOBAC RecName: Full=50S ribosomal protein L3, ch...   376   e-102
ref|XP_002880018.1| 50S ribosomal protein L3 [Arabidopsis lyrata...   370   e-100
ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chlor...   369   e-100
gb|AAM62519.1| 50S ribosomal protein L3 [Arabidopsis thaliana]        369   e-100
ref|NP_181831.1| 50S ribosomal protein L3-1 [Arabidopsis thalian...   369   e-100

>sp|O80360.1|RK3_TOBAC RecName: Full=50S ribosomal protein L3, chloroplastic; Flags:
           Precursor gi|189096128|pdb|3BBO|F Chain F, Homology
           Model For The Spinach Chloroplast 50s Subunit Fitted To
           9.4a Cryo-Em Map Of The 70s Chlororibosome
           gi|3298437|dbj|BAA31509.1| chloroplast ribosomal protein
           L3 [Nicotiana tabacum]
          Length = 259

 Score =  376 bits (966), Expect = e-102
 Identities = 189/250 (75%), Positives = 213/250 (85%), Gaps = 3/250 (1%)
 Frame = +3

Query: 96  FLLRLPIKRFSS---LSLNASPKPPLISASMEAGIGVMATKLGMMSYFDSNGAVIPVTVV 266
           FL RLP++   +    SL+ S     ISAS+EAG+GVMATKLGMMS+F+ +G V+PVTVV
Sbjct: 12  FLHRLPLRALKTHKPTSLHISKSS--ISASLEAGVGVMATKLGMMSFFEESGTVVPVTVV 69

Query: 267 GFREGNIVTQVKTVATDGYDAVQVGYRRVRDRKLTKPELGHLEKSGIIPLRHLQEFRLQS 446
           GFREGNIVTQ+KT ATDGY+AVQVGYRRVRDRKLTKPE+GHLEKSGIIPLRHLQEFRLQS
Sbjct: 70  GFREGNIVTQIKTEATDGYNAVQVGYRRVRDRKLTKPEMGHLEKSGIIPLRHLQEFRLQS 129

Query: 447 VEGFEPTQRLKVEELFKEGDLVDVSGTSIGKGFQGGIKRHNFKRGLMTHGSKSHRQLGSI 626
           ++GFE TQ+L   ELFKEGDLVDVSGT+IGKGFQGGIKRHNFKRG MTHGSKSHRQLGSI
Sbjct: 130 IDGFEVTQKLDFGELFKEGDLVDVSGTTIGKGFQGGIKRHNFKRGQMTHGSKSHRQLGSI 189

Query: 627 GAGTTPGRVYPGKKMPGRMGGXXXXXXXXXXXXXDNELNVVMVKGAVPGKPGNLLRITPA 806
           GAGTTPGRVY GKKMPGRMGG             D++LN++M+KGA+PGKPGNLLRI PA
Sbjct: 190 GAGTTPGRVYKGKKMPGRMGGTKRKIRKLKIVKIDDQLNIIMIKGALPGKPGNLLRIAPA 249

Query: 807 KIVGKNIPKN 836
           KIVGKNIPK+
Sbjct: 250 KIVGKNIPKS 259


>ref|XP_002880018.1| 50S ribosomal protein L3 [Arabidopsis lyrata subsp. lyrata]
           gi|297325857|gb|EFH56277.1| 50S ribosomal protein L3
           [Arabidopsis lyrata subsp. lyrata]
          Length = 271

 Score =  370 bits (949), Expect = e-100
 Identities = 183/244 (75%), Positives = 209/244 (85%), Gaps = 1/244 (0%)
 Frame = +3

Query: 108 LPIKRFSSLSLNASPKPP-LISASMEAGIGVMATKLGMMSYFDSNGAVIPVTVVGFREGN 284
           LP K  SSL + +SPK   ++SASMEAGIGVM +KLGMMS+F+ +G V+PVTVVGFREGN
Sbjct: 29  LPAKS-SSLLIKSSPKTRFVVSASMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGN 87

Query: 285 IVTQVKTVATDGYDAVQVGYRRVRDRKLTKPELGHLEKSGIIPLRHLQEFRLQSVEGFEP 464
           IVTQ+KT+ATDGYDAVQ+GYRRVRD+KLTKPE GHL+K+G IP+RHLQEFRL ++EGFEP
Sbjct: 88  IVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEP 147

Query: 465 TQRLKVEELFKEGDLVDVSGTSIGKGFQGGIKRHNFKRGLMTHGSKSHRQLGSIGAGTTP 644
            Q+L  +E+FKEGDLVDV+GT+IGKGFQGGIKRH+FKRG MTHGSKSHR LGSIGAGTTP
Sbjct: 148 NQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTP 207

Query: 645 GRVYPGKKMPGRMGGXXXXXXXXXXXXXDNELNVVMVKGAVPGKPGNLLRITPAKIVGKN 824
           GRVY GKKMPGRMGG             D ELNVVM+KGA+PGKPGNLLRITPAKIVG N
Sbjct: 208 GRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVN 267

Query: 825 IPKN 836
           IPKN
Sbjct: 268 IPKN 271


>ref|XP_002271466.1| PREDICTED: 50S ribosomal protein L3-1, chloroplastic-like [Vitis
           vinifera]
          Length = 281

 Score =  369 bits (948), Expect = e-100
 Identities = 187/245 (76%), Positives = 203/245 (82%)
 Frame = +3

Query: 102 LRLPIKRFSSLSLNASPKPPLISASMEAGIGVMATKLGMMSYFDSNGAVIPVTVVGFREG 281
           L+L ++ F S    A    P+I  SMEAG+GVMATKLGMMSYF+  G V+PVTVVGFREG
Sbjct: 41  LQLRLQPFRS----AKSTLPIIRMSMEAGVGVMATKLGMMSYFEPEGKVVPVTVVGFREG 96

Query: 282 NIVTQVKTVATDGYDAVQVGYRRVRDRKLTKPELGHLEKSGIIPLRHLQEFRLQSVEGFE 461
           NIVTQVKT ATDGY AVQVGYRRVRDRKLTKPE+GHLEK+G IP+RHLQEFRL SV+GFE
Sbjct: 97  NIVTQVKTEATDGYSAVQVGYRRVRDRKLTKPEMGHLEKAGTIPMRHLQEFRLVSVDGFE 156

Query: 462 PTQRLKVEELFKEGDLVDVSGTSIGKGFQGGIKRHNFKRGLMTHGSKSHRQLGSIGAGTT 641
           P Q+L  EELFKEGDLVDVSG +IGKGFQGGIKRHNF+RG MTHGSKSHR LGSIGAGTT
Sbjct: 157 PNQKLVFEELFKEGDLVDVSGITIGKGFQGGIKRHNFRRGPMTHGSKSHRALGSIGAGTT 216

Query: 642 PGRVYPGKKMPGRMGGXXXXXXXXXXXXXDNELNVVMVKGAVPGKPGNLLRITPAKIVGK 821
           PG VY GKKMPGRMGG             DN+L VVM+KGAVPGKPGNLLRITPAKIVGK
Sbjct: 217 PGHVYKGKKMPGRMGGTKTKIRKLKIVKIDNDLRVVMIKGAVPGKPGNLLRITPAKIVGK 276

Query: 822 NIPKN 836
           NIPKN
Sbjct: 277 NIPKN 281


>gb|AAM62519.1| 50S ribosomal protein L3 [Arabidopsis thaliana]
          Length = 271

 Score =  369 bits (946), Expect = e-100
 Identities = 182/244 (74%), Positives = 209/244 (85%), Gaps = 1/244 (0%)
 Frame = +3

Query: 108 LPIKRFSSLSLNASPKPP-LISASMEAGIGVMATKLGMMSYFDSNGAVIPVTVVGFREGN 284
           LP K  SSL + +SPK   ++S+SMEAGIGVM +KLGMMS+F+ +G V+PVTVVGFREGN
Sbjct: 29  LPAKS-SSLLIKSSPKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGN 87

Query: 285 IVTQVKTVATDGYDAVQVGYRRVRDRKLTKPELGHLEKSGIIPLRHLQEFRLQSVEGFEP 464
           IVTQ+KT+ATDGYDAVQ+GYRRVRD+KLTKPE GHL+K+G IP+RHLQEFRL ++EGFEP
Sbjct: 88  IVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEP 147

Query: 465 TQRLKVEELFKEGDLVDVSGTSIGKGFQGGIKRHNFKRGLMTHGSKSHRQLGSIGAGTTP 644
            Q+L  +E+FKEGDLVDV+GT+IGKGFQGGIKRH+FKRG MTHGSKSHR LGSIGAGTTP
Sbjct: 148 NQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTP 207

Query: 645 GRVYPGKKMPGRMGGXXXXXXXXXXXXXDNELNVVMVKGAVPGKPGNLLRITPAKIVGKN 824
           GRVY GKKMPGRMGG             D ELNVVM+KGA+PGKPGNLLRITPAKIVG N
Sbjct: 208 GRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVN 267

Query: 825 IPKN 836
           IPKN
Sbjct: 268 IPKN 271


>ref|NP_181831.1| 50S ribosomal protein L3-1 [Arabidopsis thaliana]
           gi|42559537|sp|Q9SKX4.1|RK3A_ARATH RecName: Full=50S
           ribosomal protein L3-1, chloroplastic; Flags: Precursor
           gi|4531443|gb|AAD22128.1| 50S ribosomal protein L3
           [Arabidopsis thaliana] gi|110740515|dbj|BAE98363.1| 50S
           ribosomal protein L3 [Arabidopsis thaliana]
           gi|208879532|gb|ACI31311.1| At2g43030 [Arabidopsis
           thaliana] gi|330255107|gb|AEC10201.1| 50S ribosomal
           protein L3-1 [Arabidopsis thaliana]
          Length = 271

 Score =  369 bits (946), Expect = e-100
 Identities = 182/244 (74%), Positives = 209/244 (85%), Gaps = 1/244 (0%)
 Frame = +3

Query: 108 LPIKRFSSLSLNASPKPP-LISASMEAGIGVMATKLGMMSYFDSNGAVIPVTVVGFREGN 284
           LP K  SSL + +SPK   ++S+SMEAGIGVM +KLGMMS+F+ +G V+PVTVVGFREGN
Sbjct: 29  LPAKS-SSLLIKSSPKTRFVVSSSMEAGIGVMGSKLGMMSFFEEDGTVVPVTVVGFREGN 87

Query: 285 IVTQVKTVATDGYDAVQVGYRRVRDRKLTKPELGHLEKSGIIPLRHLQEFRLQSVEGFEP 464
           IVTQ+KT+ATDGYDAVQ+GYRRVRD+KLTKPE GHL+K+G IP+RHLQEFRL ++EGFEP
Sbjct: 88  IVTQIKTLATDGYDAVQIGYRRVRDKKLTKPETGHLQKAGTIPMRHLQEFRLTNIEGFEP 147

Query: 465 TQRLKVEELFKEGDLVDVSGTSIGKGFQGGIKRHNFKRGLMTHGSKSHRQLGSIGAGTTP 644
            Q+L  +E+FKEGDLVDV+GT+IGKGFQGGIKRH+FKRG MTHGSKSHR LGSIGAGTTP
Sbjct: 148 NQKLVFDEIFKEGDLVDVAGTTIGKGFQGGIKRHHFKRGQMTHGSKSHRALGSIGAGTTP 207

Query: 645 GRVYPGKKMPGRMGGXXXXXXXXXXXXXDNELNVVMVKGAVPGKPGNLLRITPAKIVGKN 824
           GRVY GKKMPGRMGG             D ELNVVM+KGA+PGKPGNLLRITPAKIVG N
Sbjct: 208 GRVYKGKKMPGRMGGTRTKIRKLKIVKVDKELNVVMIKGALPGKPGNLLRITPAKIVGVN 267

Query: 825 IPKN 836
           IPKN
Sbjct: 268 IPKN 271