BLASTX nr result

ID: Scutellaria24_contig00004235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004235
         (507 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein lig...    68   9e-10
ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus c...    67   1e-09
ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein lig...    65   8e-09
ref|XP_002312782.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
gb|AAF79854.1|AC000348_7 T7N9.11 [Arabidopsis thaliana]                58   7e-07

>ref|XP_004155394.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 577

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 40/82 (48%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
 Frame = -1

Query: 507 QWKGGVR---------SSKLVRPEVPLSRHGRGNKLGSAIVNPRDENNSSKSTSSDANNG 355
           QW+ G+          SSKL+R EVPLSRHGR NKL SAIVNPR  N+SS+S        
Sbjct: 123 QWRQGINVGVNKNKELSSKLLRAEVPLSRHGRSNKLASAIVNPRRSNSSSRS-------- 174

Query: 354 NKLNTLEGALFMGREIVVYDDI 289
                     F GRE+V YDDI
Sbjct: 175 -------DVPFRGREVVAYDDI 189


>ref|XP_002520149.1| hypothetical protein RCOM_0698730 [Ricinus communis]
           gi|223540641|gb|EEF42204.1| hypothetical protein
           RCOM_0698730 [Ricinus communis]
          Length = 195

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 42/83 (50%), Positives = 51/83 (61%), Gaps = 9/83 (10%)
 Frame = -1

Query: 507 QWKGGV---------RSSKLVRPEVPLSRHGRGNKLGSAIVNPRDENNSSKSTSSDANNG 355
           QW+ GV          SSKL+R E+PLSRHGRGNKL SAIVNP       KS++SDA   
Sbjct: 126 QWREGVGVGGNKESGSSSKLLRSEIPLSRHGRGNKLASAIVNP-------KSSNSDA--- 175

Query: 354 NKLNTLEGALFMGREIVVYDDIV 286
              +++    F GREIV YDDI+
Sbjct: 176 ---SSVLDVPFKGREIVAYDDIL 195


>ref|XP_004135464.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Cucumis
           sativus]
          Length = 608

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/82 (47%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
 Frame = -1

Query: 507 QWKGGVR---------SSKLVRPEVPLSRHGRGNKLGSAIVNPRDENNSSKSTSSDANNG 355
           QW  G+          SSKL++ EVPLSRHGR NKL SAIVNPR  N+SS+S        
Sbjct: 123 QWGQGINVGVNKNKELSSKLLQAEVPLSRHGRSNKLASAIVNPRRSNSSSRS-------- 174

Query: 354 NKLNTLEGALFMGREIVVYDDI 289
                     F GRE+V YDDI
Sbjct: 175 -------DVPFRGREVVAYDDI 189


>ref|XP_002312782.1| predicted protein [Populus trichocarpa] gi|222852602|gb|EEE90149.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 38/87 (43%), Positives = 48/87 (55%), Gaps = 13/87 (14%)
 Frame = -1

Query: 507 QWKGGV-------------RSSKLVRPEVPLSRHGRGNKLGSAIVNPRDENNSSKSTSSD 367
           QW+ GV              SSKL+R  +PLSRHGRGNKL SA+VNP         TSS 
Sbjct: 128 QWREGVGAGGKRDSGSPSSSSSKLLRGGIPLSRHGRGNKLASAVVNP---------TSSS 178

Query: 366 ANNGNKLNTLEGALFMGREIVVYDDIV 286
           ++  + L+      F GREI+ YDDI+
Sbjct: 179 SDGPSVLD----VPFKGREIIAYDDIL 201


>gb|AAF79854.1|AC000348_7 T7N9.11 [Arabidopsis thaliana]
          Length = 495

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 37/85 (43%), Positives = 46/85 (54%), Gaps = 11/85 (12%)
 Frame = -1

Query: 507 QWKGGVR-----------SSKLVRPEVPLSRHGRGNKLGSAIVNPRDENNSSKSTSSDAN 361
           +WK GV            SSKL+RP +PL +HGR ++L SAIVNPR +N  +K  S D  
Sbjct: 416 KWKEGVTAGEGKERTSSFSSKLLRPVMPLRKHGRSSRLASAIVNPRSDN--TKGISGDGG 473

Query: 360 NGNKLNTLEGALFMGREIVVYDDIV 286
             +   T E      R IV YDDIV
Sbjct: 474 ISSPATTSE---VKQRNIVTYDDIV 495


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