BLASTX nr result

ID: Scutellaria24_contig00004017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00004017
         (1013 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95963.1| unknown [Populus trichocarpa]                          430   e-118
ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [...   425   e-117
ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|2...   424   e-116
ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [...   424   e-116
ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis...   423   e-116

>gb|ABK95963.1| unknown [Populus trichocarpa]
          Length = 232

 Score =  430 bits (1106), Expect = e-118
 Identities = 216/229 (94%), Positives = 223/229 (97%)
 Frame = -1

Query: 941 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 762
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 761 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 582
           EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 581 GVLRFVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 402
           GVLRFVMESGAKGCEVI+SGKLRAQRAKSMKFKDGYMISSGQPVKEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 401 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEEEYIPQVVAPAIEV 255
           VLGIKVKIMLDWDPKGK GPMTPLPDLVTIHPPKEEEY+P V+   IE+
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEYVPPVMTTNIEI 229


>ref|XP_002281141.2| PREDICTED: 40S ribosomal protein S3-3-like [Vitis vinifera]
           gi|296081703|emb|CBI20708.3| unnamed protein product
           [Vitis vinifera]
          Length = 235

 Score =  425 bits (1093), Expect = e-117
 Identities = 217/230 (94%), Positives = 223/230 (96%), Gaps = 1/230 (0%)
 Frame = -1

Query: 941 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 762
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 761 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 582
           EKG+RIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGKRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 581 GVLRFVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 402
           GVLRFVMESGAKGCEVI+SGKLRAQRAKSMKFKDGYMISSGQPVK+YID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKDYIDSAVRHVLLRQG 180

Query: 401 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPK-EEEYIPQVVAPAIEV 255
           VLGIKVKIMLDWDPKGKQGP TPLPDLVTIH PK EEEY+P V+   IEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPTTPLPDLVTIHTPKEEEEYVPPVLTTNIEV 230


>ref|XP_002322150.1| predicted protein [Populus trichocarpa] gi|222869146|gb|EEF06277.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  424 bits (1091), Expect = e-116
 Identities = 215/230 (93%), Positives = 223/230 (96%), Gaps = 1/230 (0%)
 Frame = -1

Query: 941 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 762
           MATQ+SKKRKFVADGVF+AELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQISKKRKFVADGVFYAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 761 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 582
           EKGRRIRELTSVVQKRFKFPEN VELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENGVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 581 GVLRFVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 402
           GVLRFVMESGAKGCEVI+SGKLRAQRAKSMKFKDGYMISSGQPVKEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 401 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPK-EEEYIPQVVAPAIEV 255
           VLGIKVKIMLDWDPKGK GPMTPLPDLVTIHPPK EEEY+P ++   IE+
Sbjct: 181 VLGIKVKIMLDWDPKGKVGPMTPLPDLVTIHPPKEEEEYVPPLLTTNIEI 230


>ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus]
           gi|449521735|ref|XP_004167885.1| PREDICTED: 40S
           ribosomal protein S3-3-like [Cucumis sativus]
          Length = 236

 Score =  424 bits (1090), Expect = e-116
 Identities = 218/232 (93%), Positives = 221/232 (95%), Gaps = 2/232 (0%)
 Frame = -1

Query: 941 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 762
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 761 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 582
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 120

Query: 581 GVLRFVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 402
           GVLRFVMESGAKGCEVI+SGKLRAQRAKSMKFKDGYMISSGQPVKEYID+AVRHVLLRQG
Sbjct: 121 GVLRFVMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 401 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPKEEEYI--PQVVAPAIEVE 252
           VLGIKVKIMLDWDPKGKQGP TPLPDLVTIH PKEEE    P  V P  E+E
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPPTPLPDLVTIHSPKEEEDFIRPVAVIPTTEIE 232


>ref|XP_002279950.1| PREDICTED: 40S ribosomal protein S3-3 [Vitis vinifera]
           gi|297738588|emb|CBI27833.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  423 bits (1087), Expect = e-116
 Identities = 218/231 (94%), Positives = 224/231 (96%), Gaps = 2/231 (0%)
 Frame = -1

Query: 941 MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 762
           MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG
Sbjct: 1   MATQMSKKRKFVADGVFFAELNEVLTRELAEDGYSGVEVRVTPMRTEIIIRATRTQNVLG 60

Query: 761 EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAIAQAESLRYKLLGGLAVRRACY 582
           EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCA+AQAESLRYKLLGGLAVRRACY
Sbjct: 61  EKGRRIRELTSVVQKRFKFPENSVELYAEKVNNRGLCAVAQAESLRYKLLGGLAVRRACY 120

Query: 581 GVLRFVMESGAKGCEVIISGKLRAQRAKSMKFKDGYMISSGQPVKEYIDAAVRHVLLRQG 402
           GVLRF+MESGAKGCEVI+SGKLRAQRAKSMKFKDGYMISSGQPVKEYID+AVRHVLLRQG
Sbjct: 121 GVLRFIMESGAKGCEVIVSGKLRAQRAKSMKFKDGYMISSGQPVKEYIDSAVRHVLLRQG 180

Query: 401 VLGIKVKIMLDWDPKGKQGPMTPLPDLVTIHPPK-EEEYI-PQVVAPAIEV 255
           VLGIKVKIMLDWDPKGKQGP TPLPDLVTIH PK EEEYI P+ +A  IEV
Sbjct: 181 VLGIKVKIMLDWDPKGKQGPKTPLPDLVTIHTPKEEEEYIRPEKLATDIEV 231


Top