BLASTX nr result

ID: Scutellaria24_contig00003938 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003938
         (345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADG43176.1| putative major latex-like protein [Salvia miltior...   160   1e-37
gb|ACH72969.1| major latex-like protein [Panax ginseng]               111   7e-23
gb|AER29900.1| MLP-like protein [Gossypium barbadense]                110   1e-22
gb|ABA01325.1| VDRG6 [Gossypium hirsutum] gi|83356301|gb|ABC1663...   110   2e-22
ref|XP_002888799.1| predicted protein [Arabidopsis lyrata subsp....   109   3e-22

>gb|ADG43176.1| putative major latex-like protein [Salvia miltiorrhiza]
          Length = 152

 Score =  160 bits (404), Expect = 1e-37
 Identities = 74/114 (64%), Positives = 83/114 (72%)
 Frame = +3

Query: 3   DVFHELLRYNPDGFSTVSPDKVHGCDLHDGDFGHVGSIICWRYTHDGKERVAKEIIQSID 182
           DVFHEL R+ P   ST+SP K  GCDLH+G FG VGSIICWRY HDGKE+  K++I+SID
Sbjct: 18  DVFHELFRHKPHDLSTISPGKTQGCDLHEGQFGQVGSIICWRYIHDGKEKRDKQVIESID 77

Query: 183 XXXXXXXXXXXXGDLMEQYKTFVITIHIETNGGIDLVTWTLEYEMLNENVEHPI 344
                       GD ME YKTFVIT H+ET G IDLVTWTLEYEMLNE+V HPI
Sbjct: 78  EEKKLIVFKMIEGDWMELYKTFVITAHVETTGDIDLVTWTLEYEMLNEDVGHPI 131


>gb|ACH72969.1| major latex-like protein [Panax ginseng]
          Length = 151

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/113 (42%), Positives = 71/113 (62%)
 Frame = +3

Query: 3   DVFHELLRYNPDGFSTVSPDKVHGCDLHDGDFGHVGSIICWRYTHDGKERVAKEIIQSID 182
           DVFHEL    P     ++P  + GCDLH+G+FG VGS++ W Y+ DG   +AKE I +ID
Sbjct: 18  DVFHELFGTRPHHVPNITPANIQGCDLHEGEFGKVGSVVIWNYSIDGNAMIAKEEIVAID 77

Query: 183 XXXXXXXXXXXXGDLMEQYKTFVITIHIETNGGIDLVTWTLEYEMLNENVEHP 341
                       G L E++K+ V ++H++T G  +LVTW+++YE LNE+V+ P
Sbjct: 78  EEDKSVTFKVVEGHLFEEFKSIVFSVHVDTKGEDNLVTWSIDYEKLNESVKDP 130


>gb|AER29900.1| MLP-like protein [Gossypium barbadense]
          Length = 157

 Score =  110 bits (275), Expect = 1e-22
 Identities = 50/113 (44%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
 Frame = +3

Query: 9   FHELLRYNPDGFSTVSPDKVHGCDLHDGDFGHVGSIICWRYTHDGKERVAKEIIQSIDXX 188
           FH +  + P      S +KV GCDLH+G+FG  G +ICWRY HDGK + AK++++ +D  
Sbjct: 23  FHHMWCHRPHHVHHTSSEKVQGCDLHEGEFGTPGVVICWRYVHDGKAKTAKQVVEVMDHE 82

Query: 189 XXXXXXXXXXGDLMEQYKTFVITIHI--ETNGGIDLVTWTLEYEMLNENVEHP 341
                     GDLME+YK+FVITI    +++G   +V WTL+YE L+E + HP
Sbjct: 83  KKSITFKMLEGDLMEEYKSFVITIQTSPKSDGKGSIVHWTLDYEKLHEGIGHP 135


>gb|ABA01325.1| VDRG6 [Gossypium hirsutum] gi|83356301|gb|ABC16635.1| bet vI
           [Gossypium hirsutum]
          Length = 157

 Score =  110 bits (274), Expect = 2e-22
 Identities = 49/113 (43%), Positives = 71/113 (62%), Gaps = 2/113 (1%)
 Frame = +3

Query: 9   FHELLRYNPDGFSTVSPDKVHGCDLHDGDFGHVGSIICWRYTHDGKERVAKEIIQSIDXX 188
           FHE+  + P        DK+ GCDLH+G++G VG+I+ W Y HDGK + AKE+++++D  
Sbjct: 23  FHEMFAHKPHHVHHTCYDKIQGCDLHEGEWGKVGTIVHWSYVHDGKAKKAKEVVEAVDPD 82

Query: 189 XXXXXXXXXXGDLMEQYKTFVITIHI--ETNGGIDLVTWTLEYEMLNENVEHP 341
                     GDLME+YK+FVITI +  ++ G   +V WTLEYE L+  + HP
Sbjct: 83  KNLVTFRVIEGDLMEEYKSFVITIQVSPKSEGSGSVVHWTLEYEKLHGGIAHP 135


>ref|XP_002888799.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297334640|gb|EFH65058.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 316

 Score =  109 bits (272), Expect = 3e-22
 Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 2/113 (1%)
 Frame = +3

Query: 9   FHELLRYNPDGFSTVSPDKVHGCDLHDGDFGHVGSIICWRYTHDGKERVAKEIIQSIDXX 188
           FH +    P   S  +PDK+  CDLH+GD+G VGS++ W Y HDG+ +VAKE I+++D  
Sbjct: 182 FHHMFAGKPHHVSKATPDKIQSCDLHEGDWGTVGSVVFWNYIHDGEAKVAKERIEAVDPE 241

Query: 189 XXXXXXXXXXGDLMEQYKTFVITIHI--ETNGGIDLVTWTLEYEMLNENVEHP 341
                     GDLM++YK+FVITI +  +  G   +V W  EYE +NE V HP
Sbjct: 242 KNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSVVHWHFEYEKINEEVAHP 294



 Score =  103 bits (258), Expect = 1e-20
 Identities = 48/113 (42%), Positives = 68/113 (60%), Gaps = 2/113 (1%)
 Frame = +3

Query: 9   FHELLRYNPDGFSTVSPDKVHGCDLHDGDFGHVGSIICWRYTHDGKERVAKEIIQSIDXX 188
           FH +    P   S  SP  +  CDLH+GD+G VGSI+ W Y HDG+ +VAKE I++++  
Sbjct: 26  FHHMFAGKPHHVSKASPGNIQSCDLHEGDWGTVGSIVFWNYVHDGEAKVAKERIEAVEPE 85

Query: 189 XXXXXXXXXXGDLMEQYKTFVITIHI--ETNGGIDLVTWTLEYEMLNENVEHP 341
                     GDLM++YK+FVITI +  +  G   +V W LEYE +++ V HP
Sbjct: 86  KNLITFRVIEGDLMKEYKSFVITIQVTPKHGGSGSIVHWHLEYEKISDEVAHP 138


Top