BLASTX nr result

ID: Scutellaria24_contig00003705 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003705
         (1488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera...   504   e-140
ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communi...   492   e-137
ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycin...   472   e-130
ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]   468   e-129
ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|2...   465   e-128

>ref|XP_002284034.1| PREDICTED: nucleoporin NUP53 [Vitis vinifera]
            gi|297743215|emb|CBI36082.3| unnamed protein product
            [Vitis vinifera]
          Length = 317

 Score =  504 bits (1299), Expect = e-140
 Identities = 255/338 (75%), Positives = 285/338 (84%), Gaps = 1/338 (0%)
 Frame = -1

Query: 1395 MSTNVNRTPRSGRQSLFFQDLATPVSSRRSGGKFTTPGQAAAVSALWRENFANSDLPPPP 1216
            MST V RTPRSGRQSLFFQDLA+PVSSRR  GKFT+ GQAAAVSALW +NFA SDLPPPP
Sbjct: 1    MSTTVQRTPRSGRQSLFFQDLASPVSSRR--GKFTSSGQAAAVSALWHDNFAGSDLPPPP 58

Query: 1215 VFTLEDRFDLSPESGLPDYPVSPEVKSDPRSPVQSLGRDFSTP-KSKSDVSTSYAGXXXX 1039
            ++TLEDR D SPESG+ DYPVSPE+KSD R+PV   GRDF TP K KS+ STS       
Sbjct: 59   MYTLEDRSDFSPESGILDYPVSPEIKSDLRTPVHGSGRDFLTPVKGKSEASTS------- 111

Query: 1038 XXXXXXXXPMANSSWWSPAKTGGSAEQDDKGKGSPVEGVVQPGALITLPPPREVARPEVK 859
                      A+ SWWSPAK+GG  +Q++KGKGSPVEGVVQPGALITLPPPREVARPE++
Sbjct: 112  ---------SASLSWWSPAKSGG--DQEEKGKGSPVEGVVQPGALITLPPPREVARPEMQ 160

Query: 858  KNLMPVGNWDEEEWVTVYGFSPADTNLILREFEKCGVILKHVPGPRDANWMHILYQNRSD 679
            +N +P GN DEEEWVTVYGFSP DTNL+LREFEKCGVILKHVPGPRDANW+HILYQNRSD
Sbjct: 161  RNCLPAGNLDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANWIHILYQNRSD 220

Query: 678  AQKALSKNGMDINGVLIIGVKPVDPMQRQALNDRVNNQGFMTLPPAPSSRNSESNGFRVS 499
            AQKALSKNGM INGVLI+GVKP+DPMQRQALN+R+NNQGFMTLPP  SSR+ ESN  RVS
Sbjct: 221  AQKALSKNGMQINGVLIVGVKPLDPMQRQALNERLNNQGFMTLPPPASSRSLESNPLRVS 280

Query: 498  PYPYYQQNGNSSTRQSAGTMATPAKSVVSKVMDLMFGV 385
            P PYY QNG S+ RQS+G +A+PAKSVVSK+MDLMFGV
Sbjct: 281  PRPYYLQNG-SNARQSSGAIASPAKSVVSKIMDLMFGV 317


>ref|XP_002515985.1| Nucleoporin NUP53, putative [Ricinus communis]
            gi|223544890|gb|EEF46405.1| Nucleoporin NUP53, putative
            [Ricinus communis]
          Length = 332

 Score =  492 bits (1267), Expect = e-137
 Identities = 249/339 (73%), Positives = 283/339 (83%), Gaps = 2/339 (0%)
 Frame = -1

Query: 1395 MSTNVNRTPRS-GRQSLFFQDLATPVSSRRSGGKFTTPGQAAAVSALWRENFANSDLPPP 1219
            MST VNRTP+S G +SLF+QDLA+PVS+R+  GKF TPGQAAAVSALWRENF  SDLPPP
Sbjct: 1    MSTLVNRTPKSSGSRSLFYQDLASPVSARK--GKFATPGQAAAVSALWRENFGGSDLPPP 58

Query: 1218 PVFTLEDRFDLSPESGLPDYPVSPEVKSDPRSPVQSLGRDFSTP-KSKSDVSTSYAGXXX 1042
            P++TLEDR D SPESG+PDYPVSPEVKSDPRSP Q  GR+F  P KSKSD STS+A    
Sbjct: 59   PMYTLEDRSDFSPESGIPDYPVSPEVKSDPRSPRQISGREFMIPSKSKSDASTSFA---- 114

Query: 1041 XXXXXXXXXPMANSSWWSPAKTGGSAEQDDKGKGSPVEGVVQPGALITLPPPREVARPEV 862
                       A+S+WWSPAK   S+EQ+DKGKGSPVEGVVQPGALI LPP REVARPE+
Sbjct: 115  LMNGHQNQQGSASSTWWSPAKAS-SSEQEDKGKGSPVEGVVQPGALIILPPLREVARPEM 173

Query: 861  KKNLMPVGNWDEEEWVTVYGFSPADTNLILREFEKCGVILKHVPGPRDANWMHILYQNRS 682
            ++N +P G +DEEEWVTVYGFSP DTNL+LREFEKCGVILKHVPGPRDANWMHILYQ+RS
Sbjct: 174  QRNNLPTGKFDEEEWVTVYGFSPGDTNLVLREFEKCGVILKHVPGPRDANWMHILYQSRS 233

Query: 681  DAQKALSKNGMDINGVLIIGVKPVDPMQRQALNDRVNNQGFMTLPPAPSSRNSESNGFRV 502
            DAQKALSKNGM INGVLI+GVKPVDPMQRQALN+R+NNQGFMTLPP  SSR+SE      
Sbjct: 234  DAQKALSKNGMQINGVLIVGVKPVDPMQRQALNERLNNQGFMTLPPPSSSRSSELKTLGA 293

Query: 501  SPYPYYQQNGNSSTRQSAGTMATPAKSVVSKVMDLMFGV 385
            S  PY+ QNG+SS RQS G++A+PAKSVVSK+ D+MFG+
Sbjct: 294  SSRPYHIQNGSSSARQSGGSIASPAKSVVSKIFDVMFGI 332


>ref|NP_001240960.1| uncharacterized protein LOC100783752 [Glycine max]
            gi|255639315|gb|ACU19955.1| unknown [Glycine max]
          Length = 331

 Score =  472 bits (1214), Expect = e-130
 Identities = 234/338 (69%), Positives = 271/338 (80%), Gaps = 1/338 (0%)
 Frame = -1

Query: 1395 MSTNVNRTPRSGRQSLFFQDLATPVSSRRSGGKFTTPGQAAAVSALWRENFANSDLPPPP 1216
            MST V RTPRS RQSLFFQDLA+PVS+RR  GKF++P QAAAVS+LWRENF +SDLPPPP
Sbjct: 1    MSTTVQRTPRSSRQSLFFQDLASPVSARR--GKFSSPSQAAAVSSLWRENFGSSDLPPPP 58

Query: 1215 VFTLEDRFDLSPESGLPDYPVSPEVKSDPRSPVQSLGRDFSTP-KSKSDVSTSYAGXXXX 1039
            VFTLEDR D SPESG+ DY +SPE KSD R+P+Q+  ++FSTP KSKS+ STSYA     
Sbjct: 59   VFTLEDRSDFSPESGILDYQISPETKSDTRTPIQTSNKEFSTPVKSKSEASTSYA----L 114

Query: 1038 XXXXXXXXPMANSSWWSPAKTGGSAEQDDKGKGSPVEGVVQPGALITLPPPREVARPEVK 859
                         SWWSP       EQD++G+ SPVEGVVQPGALITLPPP EVARPEV+
Sbjct: 115  RGVQQNQQGSPGLSWWSPTTAKSGGEQDERGRSSPVEGVVQPGALITLPPPLEVARPEVQ 174

Query: 858  KNLMPVGNWDEEEWVTVYGFSPADTNLILREFEKCGVILKHVPGPRDANWMHILYQNRSD 679
            +N +P GN +EEEWVTVYGFSP DTN++LREFEKCG ILKHVPGPRDANWMHILYQNRSD
Sbjct: 175  RNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWMHILYQNRSD 234

Query: 678  AQKALSKNGMDINGVLIIGVKPVDPMQRQALNDRVNNQGFMTLPPAPSSRNSESNGFRVS 499
            A KAL+KNGM INGVLI+GVK +DPMQRQALN+R+ NQGFM L P PS+RNSE +  +  
Sbjct: 235  AHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPL-PLPSARNSEVSSLKAP 293

Query: 498  PYPYYQQNGNSSTRQSAGTMATPAKSVVSKVMDLMFGV 385
              PYY QNGNS+ RQ+ GT+A+P KS+VSK+MDLMFGV
Sbjct: 294  SRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331


>ref|XP_003543628.1| PREDICTED: nucleoporin NUP53-like [Glycine max]
          Length = 331

 Score =  468 bits (1205), Expect = e-129
 Identities = 234/338 (69%), Positives = 271/338 (80%), Gaps = 1/338 (0%)
 Frame = -1

Query: 1395 MSTNVNRTPRSGRQSLFFQDLATPVSSRRSGGKFTTPGQAAAVSALWRENFANSDLPPPP 1216
            MST V RTPRS R SLFFQDLA+PVS+RR  GKF++PGQAAAVS+LWRENF +SDLPPPP
Sbjct: 1    MSTTVQRTPRSSRHSLFFQDLASPVSARR--GKFSSPGQAAAVSSLWRENFGSSDLPPPP 58

Query: 1215 VFTLEDRFDLSPESGLPDYPVSPEVKSDPRSPVQSLGRDFSTP-KSKSDVSTSYAGXXXX 1039
            VFTLEDR D SPESG+ DY +SPE KSD R+P+Q+  ++FSTP KSKS+ STSYA     
Sbjct: 59   VFTLEDRSDFSPESGILDYQISPEAKSDTRTPIQTSNKEFSTPLKSKSEASTSYA----L 114

Query: 1038 XXXXXXXXPMANSSWWSPAKTGGSAEQDDKGKGSPVEGVVQPGALITLPPPREVARPEVK 859
                         SWWSP       EQD+KG+ SPVEGVVQPGALITLPPP EVARPEV+
Sbjct: 115  RGVQQNQQGSPGLSWWSPTTAKSVGEQDEKGRSSPVEGVVQPGALITLPPPLEVARPEVQ 174

Query: 858  KNLMPVGNWDEEEWVTVYGFSPADTNLILREFEKCGVILKHVPGPRDANWMHILYQNRSD 679
            +N +P GN +EEEWVTVYGFSP DTN++LREFEKCG ILKHVPGPRDANW+HILYQNRSD
Sbjct: 175  RNSLPAGNLNEEEWVTVYGFSPGDTNMVLREFEKCGEILKHVPGPRDANWVHILYQNRSD 234

Query: 678  AQKALSKNGMDINGVLIIGVKPVDPMQRQALNDRVNNQGFMTLPPAPSSRNSESNGFRVS 499
            A KAL+KNGM INGVLI+GVK +DPMQRQALN+R+ NQGFM LP A S+RNSE +  +  
Sbjct: 235  AHKALNKNGMQINGVLIVGVKLLDPMQRQALNERLKNQGFMPLPLA-SARNSEVSTLKAP 293

Query: 498  PYPYYQQNGNSSTRQSAGTMATPAKSVVSKVMDLMFGV 385
              PYY QNGNS+ RQ+ GT+A+P KS+VSK+MDLMFGV
Sbjct: 294  SRPYYLQNGNSTARQTGGTIASPTKSLVSKIMDLMFGV 331


>ref|XP_002299732.1| predicted protein [Populus trichocarpa] gi|222846990|gb|EEE84537.1|
            predicted protein [Populus trichocarpa]
          Length = 329

 Score =  465 bits (1196), Expect = e-128
 Identities = 230/329 (69%), Positives = 271/329 (82%), Gaps = 2/329 (0%)
 Frame = -1

Query: 1365 SGRQSLFFQDLATPVSSRRSGGKFTTPGQAAAVSALWRENFANSDLPPPPVFTLEDRFDL 1186
            SGRQSLFFQDLA+PVS+ +  GKF+TP QAAAVSALWR+NF  SDLPPPP +TLEDR ++
Sbjct: 8    SGRQSLFFQDLASPVSAGK--GKFSTPAQAAAVSALWRDNFGGSDLPPPPFYTLEDRSEI 65

Query: 1185 SPESGLPDYPVSPEVKSDPR-SPVQSLGRDFSTP-KSKSDVSTSYAGXXXXXXXXXXXXP 1012
            SPESG+PDYP+SP++KS P  SP QS GR+F TP K+KS+ +TS+A              
Sbjct: 66   SPESGIPDYPLSPDIKSHPTTSPFQSSGREFGTPPKTKSEATTSFA----LISGQNTQQG 121

Query: 1011 MANSSWWSPAKTGGSAEQDDKGKGSPVEGVVQPGALITLPPPREVARPEVKKNLMPVGNW 832
               S+WWSP+K   S+E +DKGKGSPVEGVVQPGALITLPPPREVARPE  +N +P GN 
Sbjct: 122  SPISTWWSPSKAR-SSEHEDKGKGSPVEGVVQPGALITLPPPREVARPEKHRNCVPAGNL 180

Query: 831  DEEEWVTVYGFSPADTNLILREFEKCGVILKHVPGPRDANWMHILYQNRSDAQKALSKNG 652
            DEEEWVTVYGF+P DTNL+LREFEKCGVILKHVPGPR+ANWMHILYQ+R+DAQKALSKNG
Sbjct: 181  DEEEWVTVYGFAPGDTNLVLREFEKCGVILKHVPGPREANWMHILYQSRADAQKALSKNG 240

Query: 651  MDINGVLIIGVKPVDPMQRQALNDRVNNQGFMTLPPAPSSRNSESNGFRVSPYPYYQQNG 472
            M INGVLIIGVK VDPMQRQALN+R+NNQGFMTLPP  S+R  +SN  R SP P+Y QNG
Sbjct: 241  MQINGVLIIGVKLVDPMQRQALNERINNQGFMTLPPPSSTRTPDSNALRASPRPHYLQNG 300

Query: 471  NSSTRQSAGTMATPAKSVVSKVMDLMFGV 385
            ++S RQS G +A+PAKS+VSK+ D+MFG+
Sbjct: 301  STSARQSGGVIASPAKSMVSKIFDVMFGI 329


Top