BLASTX nr result

ID: Scutellaria24_contig00003486 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003486
         (836 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42150.1| unknown [Medicago truncatula]                          230   3e-58
ref|XP_003630811.1| Trafficking protein particle complex subunit...   230   3e-58
ref|XP_004144741.1| PREDICTED: trafficking protein particle comp...   227   2e-57
gb|AFK41770.1| unknown [Lotus japonicus]                              226   4e-57
ref|XP_002281149.1| PREDICTED: trafficking protein particle comp...   226   5e-57

>gb|AFK42150.1| unknown [Medicago truncatula]
          Length = 141

 Score =  230 bits (587), Expect = 3e-58
 Identities = 111/121 (91%), Positives = 117/121 (96%)
 Frame = +3

Query: 3   DYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVSGCTGIQLLQADTFDLHCFQSLTGTKF 182
           DYGS+GRMDTNDSLR+ASLWHSMHAISQQLSPVSGCTGI+LLQADTFDLHCFQSLTGTKF
Sbjct: 21  DYGSSGRMDTNDSLRVASLWHSMHAISQQLSPVSGCTGIELLQADTFDLHCFQSLTGTKF 80

Query: 183 FVVSEPGTLYMENLLKNIYELYTDYVLKNPFYEVEMPIRCELFDINLAQAVQKDRVALLG 362
           FVV EPGT  ME+LLK +YELYTDYVLKNPFYE+EMPIRCELFDINLAQAVQKDRVALLG
Sbjct: 81  FVVCEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLG 140

Query: 363 R 365
           R
Sbjct: 141 R 141


>ref|XP_003630811.1| Trafficking protein particle complex subunit [Medicago truncatula]
           gi|355524833|gb|AET05287.1| Trafficking protein particle
           complex subunit [Medicago truncatula]
          Length = 213

 Score =  230 bits (587), Expect = 3e-58
 Identities = 111/121 (91%), Positives = 117/121 (96%)
 Frame = +3

Query: 3   DYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVSGCTGIQLLQADTFDLHCFQSLTGTKF 182
           DYGS+GRMDTNDSLR+ASLWHSMHAISQQLSPVSGCTGI+LLQADTFDLHCFQSLTGTKF
Sbjct: 93  DYGSSGRMDTNDSLRVASLWHSMHAISQQLSPVSGCTGIELLQADTFDLHCFQSLTGTKF 152

Query: 183 FVVSEPGTLYMENLLKNIYELYTDYVLKNPFYEVEMPIRCELFDINLAQAVQKDRVALLG 362
           FVV EPGT  ME+LLK +YELYTDYVLKNPFYE+EMPIRCELFDINLAQAVQKDRVALLG
Sbjct: 153 FVVCEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLG 212

Query: 363 R 365
           R
Sbjct: 213 R 213


>ref|XP_004144741.1| PREDICTED: trafficking protein particle complex subunit 4-like
           [Cucumis sativus] gi|449490796|ref|XP_004158709.1|
           PREDICTED: trafficking protein particle complex subunit
           4-like [Cucumis sativus]
          Length = 141

 Score =  227 bits (579), Expect = 2e-57
 Identities = 107/121 (88%), Positives = 118/121 (97%)
 Frame = +3

Query: 3   DYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVSGCTGIQLLQADTFDLHCFQSLTGTKF 182
           DYGSAGRMDTNDSLR+ASLWHSMHAISQQLSP++GC+G++LL+ADTFDLHCFQSLTGTKF
Sbjct: 21  DYGSAGRMDTNDSLRVASLWHSMHAISQQLSPIAGCSGVELLEADTFDLHCFQSLTGTKF 80

Query: 183 FVVSEPGTLYMENLLKNIYELYTDYVLKNPFYEVEMPIRCELFDINLAQAVQKDRVALLG 362
           FVV EPGT +ME+LLK IYELYTD+VLKNPFYE+EMPIRCELFDINLAQAVQKDRVALLG
Sbjct: 81  FVVCEPGTQHMESLLKYIYELYTDFVLKNPFYEMEMPIRCELFDINLAQAVQKDRVALLG 140

Query: 363 R 365
           R
Sbjct: 141 R 141


>gb|AFK41770.1| unknown [Lotus japonicus]
          Length = 141

 Score =  226 bits (577), Expect = 4e-57
 Identities = 109/121 (90%), Positives = 115/121 (95%)
 Frame = +3

Query: 3   DYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVSGCTGIQLLQADTFDLHCFQSLTGTKF 182
           DYGSAGRMDTND+LR+ASLWHSMHAISQQLSPVSGC GI+LLQADTFDLHCFQSLTGTKF
Sbjct: 21  DYGSAGRMDTNDTLRVASLWHSMHAISQQLSPVSGCAGIELLQADTFDLHCFQSLTGTKF 80

Query: 183 FVVSEPGTLYMENLLKNIYELYTDYVLKNPFYEVEMPIRCELFDINLAQAVQKDRVALLG 362
           FVVSEPGT  ME+LLK +YELYTDYVLKNPFYE+EMPIRCELFDINL QAVQKDRVALL 
Sbjct: 81  FVVSEPGTQQMESLLKFVYELYTDYVLKNPFYEMEMPIRCELFDINLTQAVQKDRVALLA 140

Query: 363 R 365
           R
Sbjct: 141 R 141


>ref|XP_002281149.1| PREDICTED: trafficking protein particle complex subunit 4 [Vitis
           vinifera] gi|147807581|emb|CAN66318.1| hypothetical
           protein VITISV_040622 [Vitis vinifera]
           gi|296089818|emb|CBI39637.3| unnamed protein product
           [Vitis vinifera]
          Length = 141

 Score =  226 bits (576), Expect = 5e-57
 Identities = 109/121 (90%), Positives = 115/121 (95%)
 Frame = +3

Query: 3   DYGSAGRMDTNDSLRLASLWHSMHAISQQLSPVSGCTGIQLLQADTFDLHCFQSLTGTKF 182
           DYGSAGRMDTNDSLRLASLWHSMHAISQQLSP  GC+GI+LL+ADTFDLHCFQSLTGTKF
Sbjct: 21  DYGSAGRMDTNDSLRLASLWHSMHAISQQLSPTLGCSGIELLEADTFDLHCFQSLTGTKF 80

Query: 183 FVVSEPGTLYMENLLKNIYELYTDYVLKNPFYEVEMPIRCELFDINLAQAVQKDRVALLG 362
           FVV EPGT +ME LLK IYELYTDYVLKNPFYE+EMPIRCELFDINL+QAVQKDRVALLG
Sbjct: 81  FVVCEPGTQHMEGLLKVIYELYTDYVLKNPFYEMEMPIRCELFDINLSQAVQKDRVALLG 140

Query: 363 R 365
           R
Sbjct: 141 R 141


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