BLASTX nr result

ID: Scutellaria24_contig00003449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003449
         (938 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot...   165   2e-38
emb|CBI32424.3| unnamed protein product [Vitis vinifera]              165   2e-38
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]   144   4e-32
ref|XP_002518776.1| DNA repair and recombination protein RAD54B,...   135   1e-29
ref|XP_003516779.1| PREDICTED: DNA repair and recombination prot...   131   2e-28

>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
            vinifera]
          Length = 934

 Score =  165 bits (417), Expect = 2e-38
 Identities = 92/172 (53%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
 Frame = -2

Query: 937  GFAGLSGCLNNLKSHEKQVGTPKEEDLYSWGHHHFPSSVPDSIFQASAGDEVSFVFTNQV 758
            GFAG++GCL+ LK  EKQVGT  EEDL SWGHH F +SVPD+IFQASAGDEV+FVFTNQV
Sbjct: 763  GFAGITGCLHKLKRSEKQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQV 822

Query: 757  QGKLAPIESTVKPKIEEAE-HKSQPSFRRALSQRPVLSYKHRQTSPSISLNGDS--RVSS 587
             GKL P+ES V+  ++  E +K+Q   R  L Q+P L  KH+Q++P +S  GDS   +SS
Sbjct: 823  DGKLVPVESKVRANMQGVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISS 882

Query: 586  FSLNPLPPPHSKFMRTLHGKTNTLLSPKVSPSIQITPNKLSPAYV-NDDDFE 434
             S  P      K MRT  G  +  L PK+S   Q+   +LSP  V +DDDFE
Sbjct: 883  SSSKPFHLAGIKSMRTSKGTPSVTLKPKLSIGSQLPLKRLSPDSVQHDDDFE 934


>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
          Length = 1112

 Score =  165 bits (417), Expect = 2e-38
 Identities = 92/172 (53%), Positives = 115/172 (66%), Gaps = 4/172 (2%)
 Frame = -2

Query: 937  GFAGLSGCLNNLKSHEKQVGTPKEEDLYSWGHHHFPSSVPDSIFQASAGDEVSFVFTNQV 758
            GFAG++GCL+ LK  EKQVGT  EEDL SWGHH F +SVPD+IFQASAGDEV+FVFTNQV
Sbjct: 941  GFAGITGCLHKLKRSEKQVGTALEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQV 1000

Query: 757  QGKLAPIESTVKPKIEEAE-HKSQPSFRRALSQRPVLSYKHRQTSPSISLNGDS--RVSS 587
             GKL P+ES V+  ++  E +K+Q   R  L Q+P L  KH+Q++P +S  GDS   +SS
Sbjct: 1001 DGKLVPVESKVRANMQGVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISS 1060

Query: 586  FSLNPLPPPHSKFMRTLHGKTNTLLSPKVSPSIQITPNKLSPAYV-NDDDFE 434
             S  P      K MRT  G  +  L PK+S   Q+   +LSP  V +DDDFE
Sbjct: 1061 SSSKPFHLAGIKSMRTSKGTPSVTLKPKLSIGSQLPLKRLSPDSVQHDDDFE 1112


>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
          Length = 985

 Score =  144 bits (362), Expect = 4e-32
 Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 3/125 (2%)
 Frame = -2

Query: 937  GFAGLSGCLNNLKSHEKQVGTPKEEDLYSWGHHHFPSSVPDSIFQASAGDEVSFVFTNQV 758
            GFAG++GCL+ LK  EKQVGTP EEDL SWGHH F +SVPD+IFQASAGDEV+FVFTNQV
Sbjct: 742  GFAGITGCLHKLKRSEKQVGTPLEEDLGSWGHHFFSTSVPDAIFQASAGDEVTFVFTNQV 801

Query: 757  QGKLAPIESTVKPKIEEAE-HKSQPSFRRALSQRPVLSYKHRQTSPSISLNGDS--RVSS 587
             GKL P+ES V+  ++  E +K+Q   R  L Q+P L  KH+Q++P +S  GDS   +SS
Sbjct: 802  DGKLVPVESKVRANMQGVEANKNQSDKRGKLLQKPTLLSKHQQSAPPVSNKGDSITSISS 861

Query: 586  FSLNP 572
             S  P
Sbjct: 862  SSSKP 866


>ref|XP_002518776.1| DNA repair and recombination protein RAD54B, putative [Ricinus
            communis] gi|223542157|gb|EEF43701.1| DNA repair and
            recombination protein RAD54B, putative [Ricinus communis]
          Length = 940

 Score =  135 bits (340), Expect = 1e-29
 Identities = 82/173 (47%), Positives = 104/173 (60%), Gaps = 5/173 (2%)
 Frame = -2

Query: 937  GFAGLSGCLNNLKSHEKQVGTPKEEDLYSWGHHHFPSSVPDSIFQASAGDEVSFVFTNQV 758
            GFA ++G L+ LKS EKQVGTP EEDL SWGHH   +SVPD+I QASAGDEV+FVFTNQV
Sbjct: 768  GFAKIAGILHELKSSEKQVGTPLEEDLGSWGHHFHSTSVPDAILQASAGDEVTFVFTNQV 827

Query: 757  QGKLAPIESTVKPKIEEAEHKSQPSFRRALSQRPVLSYKHRQTSPSISLNGDS--RVSSF 584
             GKL PIEST  PK+ E +        +    R    ++H++   SIS + DS     S 
Sbjct: 828  DGKLVPIESTASPKMLEIKGNQNQHDGKENMSRTSRLFQHQKLLQSISASRDSLEETLSA 887

Query: 583  SLNPLPPPHSKFMRT-LHGKTNTLLSPKVSPSIQITPNKLSPAYV--NDDDFE 434
            S  PL     K  RT L G T++ L  ++S   Q+   ++ P  V  +DDDFE
Sbjct: 888  SFKPLEGATVKRRRTSLKGTTDSTLKSRLSSGTQLPFKRVFPYNVEQHDDDFE 940


>ref|XP_003516779.1| PREDICTED: DNA repair and recombination protein RAD54-like [Glycine
            max]
          Length = 894

 Score =  131 bits (330), Expect = 2e-28
 Identities = 76/168 (45%), Positives = 100/168 (59%), Gaps = 2/168 (1%)
 Frame = -2

Query: 937  GFAGLSGCLNNLKSHEKQVGTPKEEDLYSWGHHHFPSSVPDSIFQASAGDEVSFVFTNQV 758
            GFA ++GCL NLK  EKQVG+P EEDL SWGHH FP+SVPD+I QASAGDEV+FVFTNQV
Sbjct: 747  GFAEIAGCLQNLKRSEKQVGSPLEEDLGSWGHHFFPTSVPDAILQASAGDEVTFVFTNQV 806

Query: 757  QGKLAPIESTVKPKIEEAEHKSQPSFRRALSQRPVLSYKHRQTSPSISLNGDSRVSSFSL 578
             G+L P+ES + PK+++ + K +           +L  K          NG  + + FSL
Sbjct: 807  NGRLVPVESIMSPKLQQKDPKKE-----------LLKSKQ---------NGKQKPTPFSL 846

Query: 577  -NPLPPPHSKFMRTLHGKTNTLLSPKVSPSIQITPNKLS-PAYVNDDD 440
             N LP   +    T +   N    P+ S   ++ P K S PA +NDD+
Sbjct: 847  HNRLPLQSASVGITKNISMNVAFKPQYSLVSKVLPQKRSCPANINDDN 894


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