BLASTX nr result

ID: Scutellaria24_contig00003369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003369
         (1347 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              281   2e-73
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   280   6e-73
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   258   3e-66
ref|XP_002871181.1| hypothetical protein ARALYDRAFT_908496 [Arab...   254   3e-65
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...   250   5e-64

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  281 bits (720), Expect = 2e-73
 Identities = 174/361 (48%), Positives = 211/361 (58%), Gaps = 38/361 (10%)
 Frame = +1

Query: 283  FKPGIIAIVGILTTIFSVTFLLLMYMKHCKRSR---YTNTSRGYPPSRRNSGIDRKVIAS 453
            F+P I  IVG+LTT+FS+TFLLL+Y KHCKR     YT T      +R+NSGIDR VI S
Sbjct: 52   FRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLSSAARKNSGIDRTVIES 111

Query: 454  LPMFRFSSLRGQKDGLECAVCLNKFDPDEVLRLLPKCRHAFHVECIDTWLEAHSTCPLCR 633
            LP+FRF+SLRGQKDGLECAVCLN+F+P E+LRLLPKC+HAFHVEC+DTWL+AHSTCPLCR
Sbjct: 112  LPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCR 171

Query: 634  YRVDPEDVLLILCNHVT----PRGSDQEHTKP-----NP---RVSGRHSSAGEGGTLPLE 777
            YRVDPED+LL+    ++    P     E  KP     NP   RVSGRHSSAGE  +    
Sbjct: 172  YRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGERRS---- 227

Query: 778  INDFPGRVSLDSWSSRRKTGDGGSVNPSSWKSFMRKSGNDAENTGRRGKQSRKDGQLPVQ 957
                 G V +        T    S++ SS  S  R   N+    G   +  + +  L  +
Sbjct: 228  -----GLVQIVLHKPDETTSSRRSLDSSSSSSRKR---NEPVAVGCFDRPRKDELLLTSE 279

Query: 958  GEN---HRLEHRIIVGDEEEG--RRRWSDVQAAESLYLRWEMVV--------------GG 1080
              N    RL+HRIIV     G   +RWSDVQ ++ LYLR EM++              GG
Sbjct: 280  DRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLSSCHGTIEGG 339

Query: 1081 GESGRGVINGRSVSEITGVSRYRSN----NXXXXXXXXXXXXXWLAWISQSQQQHHQNPA 1248
              SGR VIN RSVSEITG+SR  SN    +             WLAWISQS+       A
Sbjct: 340  SWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQRQAGVVSRWLAWISQSRPSVRSERA 399

Query: 1249 G 1251
            G
Sbjct: 400  G 400


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  280 bits (716), Expect = 6e-73
 Identities = 172/352 (48%), Positives = 209/352 (59%), Gaps = 38/352 (10%)
 Frame = +1

Query: 283  FKPGIIAIVGILTTIFSVTFLLLMYMKHCKRSR---YTNTSRGYPPSRRNSGIDRKVIAS 453
            F+P I  IVG+LTT+FS+TFLLL+Y KHCKR     YT T      +R+NSGIDR VI S
Sbjct: 52   FRPSIAVIVGVLTTMFSITFLLLLYAKHCKRGNGVVYTGTPPLSSAARKNSGIDRTVIES 111

Query: 454  LPMFRFSSLRGQKDGLECAVCLNKFDPDEVLRLLPKCRHAFHVECIDTWLEAHSTCPLCR 633
            LP+FRF+SLRGQKDGLECAVCLN+F+P E+LRLLPKC+HAFHVEC+DTWL+AHSTCPLCR
Sbjct: 112  LPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLDAHSTCPLCR 171

Query: 634  YRVDPEDVLLILCNHVT----PRGSDQEHTKP-----NP---RVSGRHSSAGEGGTLPLE 777
            YRVDPED+LL+    ++    P     E  KP     NP   RVSGRHSSAGE  +    
Sbjct: 172  YRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSAGERRS---- 227

Query: 778  INDFPGRVSLDSWSSRRKTGDGGSVNPSSWKSFMRKSGNDAENTGRRGKQSRKDGQLPVQ 957
                 G V +        T    S++ SS  S  R   N+    G   +  + +  L  +
Sbjct: 228  -----GLVQIVLHKPDETTSSRRSLDSSSSSSRKR---NEPVAVGCFDRPRKDELLLTSE 279

Query: 958  GEN---HRLEHRIIVGDEEEG--RRRWSDVQAAESLYLRWEMVV--------------GG 1080
              N    RL+HRIIV     G   +RWSDVQ ++ LYLR EM++              GG
Sbjct: 280  DRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRRLSSCHGTIEGG 339

Query: 1081 GESGRGVINGRSVSEITGVSRYRSN----NXXXXXXXXXXXXXWLAWISQSQ 1224
              SGR VIN RSVSEITG+SR  SN    +             WLAWISQS+
Sbjct: 340  SWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQRQAGVVSRWLAWISQSR 391


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
            gi|223550481|gb|EEF51968.1| ring finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  258 bits (658), Expect = 3e-66
 Identities = 170/399 (42%), Positives = 211/399 (52%), Gaps = 88/399 (22%)
 Frame = +1

Query: 283  FKPGIIAIVGILTTIFSVTFLLLMYMKHCKRSRYTN--------TSRGYPPSRRNSGIDR 438
            FKP I  IVG+LTT+FS+T LLL+Y KHCKR+   N        T      +R+NSGIDR
Sbjct: 75   FKPSIAVIVGVLTTMFSITLLLLLYAKHCKRAHIYNSFNNGGGGTGGQTAEARKNSGIDR 134

Query: 439  KVIASLPMFRFSSLRGQKDGLECAVCLNKFDPDEVLRLLPKCRHAFHVECIDTWLEAHST 618
             VI SLP+FRFSSLRGQKDGLECAVCL +F+P EVLRLLPKC+HAFHVEC+DTWL+AHST
Sbjct: 135  AVIESLPIFRFSSLRGQKDGLECAVCLTRFEPPEVLRLLPKCKHAFHVECVDTWLDAHST 194

Query: 619  CPLCRYRVDPEDVLLI-------LCNHVTPRGSDQEHTK---PNPRVSGRHSSAGE---G 759
            CPLCRYRVDPEDVLLI          +++     Q+ T+      R+SGRHSSAGE   G
Sbjct: 195  CPLCRYRVDPEDVLLIDQDKDPATTTNISLPPPQQQSTEIHGGGRRISGRHSSAGEKASG 254

Query: 760  GTLPLEINDFP---------GRVSLDSWSSRRKTGDGGSVNPS-------SWKSFMRKSG 891
              L   +   P          R SLDS+S ++   +  + N S        ++S  RK G
Sbjct: 255  FALSQIVVQRPSATEQTTWFARRSLDSFSMKKNKNNHITRNESVAVGCFDRYQSHQRKDG 314

Query: 892  ---------NDAENTG-RRGKQSRKDGQLPVQG------ENHRLEHRIIVGDEEEGRRRW 1023
                      D ++ G     +SR+     V        +  R EHRIIV        RW
Sbjct: 315  LLLLTNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDKTRFEHRIIVSGNASD-ERW 373

Query: 1024 SDVQAAESLYLRWEMVV-------------------------------GGGESGRGVING 1110
            SDV  ++ LYLR EM++                               G    GR VING
Sbjct: 374  SDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQQNAVVKGPSSDGRSVING 433

Query: 1111 RSVSEITGVSRY----RSNNXXXXXXXXXXXXXWLAWIS 1215
            RSVSEITG++R+     +N+             WLAWIS
Sbjct: 434  RSVSEITGLNRFSDRESNNSRHHRERQAGVVSRWLAWIS 472


>ref|XP_002871181.1| hypothetical protein ARALYDRAFT_908496 [Arabidopsis lyrata subsp.
            lyrata] gi|297317018|gb|EFH47440.1| hypothetical protein
            ARALYDRAFT_908496 [Arabidopsis lyrata subsp. lyrata]
          Length = 352

 Score =  254 bits (650), Expect = 3e-65
 Identities = 158/348 (45%), Positives = 192/348 (55%), Gaps = 41/348 (11%)
 Frame = +1

Query: 289  PGIIAIVGILTTIFSVTFLLLMYMKHCKR---------------SRYTN---TSRGYPPS 414
            PGI  ++ +LT  FS+TFLLL+Y+KHCKR               SRY        G    
Sbjct: 2    PGIAVVIAVLTAFFSITFLLLLYVKHCKRRSGTVYVNHPQRFAISRYGGGYYNGGGVGGG 61

Query: 415  RRNSGIDRKVIASLPMFRFSSLRGQKDGLECAVCLNKFDPDEVLRLLPKCRHAFHVECID 594
            R+NSGIDR VI SLP+FRF +L G KDGLECAVCL +F+P EVLRLLPKC+HAFHVEC+D
Sbjct: 62   RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPAEVLRLLPKCKHAFHVECVD 121

Query: 595  TWLEAHSTCPLCRYRVDPEDVLLI-LCNHVTPRGSDQEHTK------------PNPRVSG 735
            TWL+AHSTCPLCRYRVDPED+LLI  CN        +E +             P  R+SG
Sbjct: 122  TWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELRFSKEESNSISNPPGLTRFVPVSRISG 181

Query: 736  RHSSAGEGGTLPLEINDFPGRVSLDSWSSRRKTGDGGSVNPSSWKSFMRKSGNDAENTGR 915
            RHSSAGE  +   EI       S +  S RR       VN +       KS + A N   
Sbjct: 182  RHSSAGERASRLNEIRTSSSSKS-NPMSFRRSLDSSLKVNDAG----EEKSESVAVNC-- 234

Query: 916  RGKQSRKDGQLPVQGENH---RLEHRIIVGDEEEGRRRWSDVQAAESLYLRWEMV----- 1071
              +  RKDG L +  +     R EHRII+       +RWS+V+ A+ LYLR EM+     
Sbjct: 235  LDRLQRKDGLLLIPNQESMEGRFEHRIIIAGGNRDDQRWSEVRPADLLYLRSEMILSDCR 294

Query: 1072 -VGGGESGRGVINGRSVSEITGVSRYRS-NNXXXXXXXXXXXXXWLAW 1209
             +   E GR VINGRSVSE+TG+ R R                 WLAW
Sbjct: 295  KLAAAEGGRDVINGRSVSELTGIERRRRWGGEPRQRQATAVISRWLAW 342


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
            gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
            thaliana] gi|61656157|gb|AAX49381.1| At5g05810
            [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
            RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score =  250 bits (639), Expect = 5e-64
 Identities = 156/349 (44%), Positives = 189/349 (54%), Gaps = 42/349 (12%)
 Frame = +1

Query: 289  PGIIAIVGILTTIFSVTFLLLMYMKHCKR---SRYTNTSR---------------GYPPS 414
            PGI  ++ +LT  FS+TFLLL+Y+KHCKR   S Y N  +               G    
Sbjct: 2    PGIAVVIAVLTAFFSLTFLLLLYVKHCKRRNGSVYVNHPQRFAITRYGGGYYNGGGVVGG 61

Query: 415  RRNSGIDRKVIASLPMFRFSSLRGQKDGLECAVCLNKFDPDEVLRLLPKCRHAFHVECID 594
            R+NSGIDR VI SLP+FRF +L G KDGLECAVCL +F+P EVLRLLPKC+HAFHVEC+D
Sbjct: 62   RKNSGIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVD 121

Query: 595  TWLEAHSTCPLCRYRVDPEDVLLI--------------LCNHVTPRGSDQEHTKPNPRVS 732
            TWL+AHSTCPLCRYRVDPED+LLI                N V           P  R+S
Sbjct: 122  TWLDAHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRIS 181

Query: 733  GRHSSAGEGGTLPLEINDFPGRVSLDSWSSRRKTGDGGSVNPSSWKSFMRKSGNDAENTG 912
            GRHSSAGE  +   EI       S +  S RR       VN +       KS + A N  
Sbjct: 182  GRHSSAGERASRLNEIRTSSSYKS-NPMSFRRSLDSSLKVNDAG----EEKSESVAVNC- 235

Query: 913  RRGKQSRKDGQLPVQGENH---RLEHRIIVGDEEEGRRRWSDVQAAESLYLRWEMV---- 1071
               +  RKDG L +        R EHRII+       +RWS+V+ ++ LYLR EM+    
Sbjct: 236  -LDRLQRKDGLLLIPNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSDC 294

Query: 1072 --VGGGESGRGVINGRSVSEITGVSRYRS-NNXXXXXXXXXXXXXWLAW 1209
              +   E GR VINGRSVSE+TG+ R R                 WLAW
Sbjct: 295  RKLAAAEGGRDVINGRSVSELTGIERRRRWGGEPRQRQATAVISRWLAW 343


Top