BLASTX nr result

ID: Scutellaria24_contig00003231 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003231
         (1344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002533227.1| translation initiation factor if-3, putative...   280   8e-73
ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|2...   279   1e-72
ref|XP_004144726.1| PREDICTED: translation initiation factor IF-...   275   1e-71
ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation ...   273   7e-71
ref|XP_002276984.1| PREDICTED: translation initiation factor IF-...   268   2e-69

>ref|XP_002533227.1| translation initiation factor if-3, putative [Ricinus communis]
            gi|223526947|gb|EEF29148.1| translation initiation factor
            if-3, putative [Ricinus communis]
          Length = 274

 Score =  280 bits (715), Expect = 8e-73
 Identities = 158/274 (57%), Positives = 187/274 (68%), Gaps = 16/274 (5%)
 Frame = -1

Query: 1227 MAGLTSTF-HHPCNSQFPKTLKPSSFYLPTSSFRI--------RXXXXXXXXXXXXXXSA 1075
            MAG+T++F  +P  +Q     K + F L +   ++        +              SA
Sbjct: 1    MAGITTSFPFNPLLTQLTTATKTTQFILSSLESKLFGLRFHCSKPDSLISLSRASVVTSA 60

Query: 1074 RYGGG-------GFRKPKPVEDEALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDA 916
            R+GGG         R+    +D ALD S ++S TVRLID+QQ MVG+V K+EA QMAE+A
Sbjct: 61   RFGGGFRSSGDRRSRQSDSEDDHALDISTIRSATVRLIDEQQNMVGVVPKSEAIQMAENA 120

Query: 915  ELDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDY 736
             LDLVILSPDADPPVVRIMDYN               KS ATRMDLKELKMGYNID HDY
Sbjct: 121  ALDLVILSPDADPPVVRIMDYNKYRYELQKKKKGQQKKSAATRMDLKELKMGYNIDQHDY 180

Query: 735  SVRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRN 556
             VRLRAA++FL DGDKVK+IV+LKGRENEFRN AIELIRRFQ DVGELATEE+KNF+DRN
Sbjct: 181  DVRLRAARKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQNDVGELATEETKNFRDRN 240

Query: 555  IFIILVPNKAIAQKAQEPPKKKDNTVADEVSASV 454
            IFI L PNKAI QK+QEPPKK+D +  +EVSA V
Sbjct: 241  IFITLAPNKAILQKSQEPPKKRDKSAVNEVSAGV 274


>ref|XP_002325123.1| predicted protein [Populus trichocarpa] gi|222866557|gb|EEF03688.1|
            predicted protein [Populus trichocarpa]
          Length = 278

 Score =  279 bits (713), Expect = 1e-72
 Identities = 147/214 (68%), Positives = 168/214 (78%), Gaps = 6/214 (2%)
 Frame = -1

Query: 1077 ARYGGGGF------RKPKPVEDEALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDA 916
            AR+GG         RK    +D+AL+ S+++S TVRLIDQQQ MVG+V+  +A QMAED 
Sbjct: 65   ARFGGPRSYDSRRPRKSDSDDDQALNISSIRSATVRLIDQQQNMVGVVTVRDAIQMAEDT 124

Query: 915  ELDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDY 736
            EL+LVI+SPDADPPVVRIMDYN               KS A+RMDLKELKMGYNID HDY
Sbjct: 125  ELNLVIVSPDADPPVVRIMDYNKFRYEQQKKKRGQQKKSAASRMDLKELKMGYNIDQHDY 184

Query: 735  SVRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRN 556
             VRLRAA++FL DGDKVK+IV+LKGRENEFRNNAIEL+RRFQ DVGELATEESKNF+DRN
Sbjct: 185  DVRLRAARKFLKDGDKVKVIVNLKGRENEFRNNAIELLRRFQNDVGELATEESKNFRDRN 244

Query: 555  IFIILVPNKAIAQKAQEPPKKKDNTVADEVSASV 454
             FI LVPNKA+ QKAQEPPKKKD + ADEVSA V
Sbjct: 245  AFITLVPNKALLQKAQEPPKKKDKSAADEVSAGV 278


>ref|XP_004144726.1| PREDICTED: translation initiation factor IF-3-like [Cucumis sativus]
          Length = 299

 Score =  275 bits (704), Expect = 1e-71
 Identities = 149/213 (69%), Positives = 166/213 (77%), Gaps = 5/213 (2%)
 Frame = -1

Query: 1077 ARYGGG----GFRKPKPVEDE-ALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDAE 913
            AR GG     G    K   DE  LD SA+KS  VRLID +Q MVG+VSKA+A QMAEDAE
Sbjct: 87   ARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAE 146

Query: 912  LDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDYS 733
            LDLV++SPDADPPVVRIMDYN               KS ATRMDLKELKMGYNID HDYS
Sbjct: 147  LDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYS 206

Query: 732  VRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRNI 553
            VRL+AA++FL DGDKVK+IV+LKGRENEFRN AIELIRRFQ +VGELATEE+KNF+DRNI
Sbjct: 207  VRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNI 266

Query: 552  FIILVPNKAIAQKAQEPPKKKDNTVADEVSASV 454
            FI+LVPNKA+ QKAQEPPKKKD    + VSASV
Sbjct: 267  FIVLVPNKAVLQKAQEPPKKKDKPAVNGVSASV 299


>ref|XP_004163986.1| PREDICTED: LOW QUALITY PROTEIN: translation initiation factor
            IF-3-like [Cucumis sativus]
          Length = 299

 Score =  273 bits (698), Expect = 7e-71
 Identities = 148/213 (69%), Positives = 165/213 (77%), Gaps = 5/213 (2%)
 Frame = -1

Query: 1077 ARYGGG----GFRKPKPVEDE-ALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDAE 913
            AR GG     G    K   DE  LD SA+KS  VRLID +Q MVG+VSKA+A QMAEDAE
Sbjct: 87   ARLGGAPRSSGPPDSKRSNDEIGLDISAIKSINVRLIDAEQNMVGVVSKAQAIQMAEDAE 146

Query: 912  LDLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDYS 733
            LDLV++SPDADPPVVRIMDYN               KS ATRMDLKELKMGYNID HDYS
Sbjct: 147  LDLVVVSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAATRMDLKELKMGYNIDQHDYS 206

Query: 732  VRLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRNI 553
            VRL+AA++FL DGDKVK+IV+LKGRENEFRN AIELIRRFQ +VGELATEE+KNF+DRNI
Sbjct: 207  VRLKAAKKFLKDGDKVKVIVNLKGRENEFRNIAIELIRRFQEEVGELATEEAKNFRDRNI 266

Query: 552  FIILVPNKAIAQKAQEPPKKKDNTVADEVSASV 454
            FI+LVPNKA+ QKAQEPPKK D    + VSASV
Sbjct: 267  FIVLVPNKAVLQKAQEPPKKXDKPAVNGVSASV 299


>ref|XP_002276984.1| PREDICTED: translation initiation factor IF-3 [Vitis vinifera]
            gi|297743667|emb|CBI36550.3| unnamed protein product
            [Vitis vinifera]
          Length = 272

 Score =  268 bits (686), Expect = 2e-69
 Identities = 158/272 (58%), Positives = 182/272 (66%), Gaps = 14/272 (5%)
 Frame = -1

Query: 1227 MAGLTSTF-HHPCNSQFPKTLKPSSFYLPTSSFRIRXXXXXXXXXXXXXXS------ARY 1069
            MAGLTS     P   +   T  P  F L +  F +R              S      ARY
Sbjct: 1    MAGLTSGIPFKPFIFRTKTTSSPLYFSLDSQLFGVRLCSPTFSKCRSFSSSLHRSVTARY 60

Query: 1068 GG-------GGFRKPKPVEDEALDFSAVKSNTVRLIDQQQKMVGIVSKAEAFQMAEDAEL 910
            GG          R+    +D+ALD S+++S +VRLID+QQ MVG+VSK++A QMAEDAEL
Sbjct: 61   GGYRSSGDAWRSRQRDSDDDQALDVSSIRSASVRLIDEQQNMVGVVSKSQAIQMAEDAEL 120

Query: 909  DLVILSPDADPPVVRIMDYNXXXXXXXXXXXXXXXKSLATRMDLKELKMGYNIDVHDYSV 730
            DLV+LSPDADPPVVRIMDYN               KS A RMDLKELKMGYNID HDYSV
Sbjct: 121  DLVVLSPDADPPVVRIMDYNKYRYELQKKKRGQQKKSAANRMDLKELKMGYNIDSHDYSV 180

Query: 729  RLRAAQRFLNDGDKVKIIVSLKGRENEFRNNAIELIRRFQADVGELATEESKNFKDRNIF 550
            RL+AA++FL DGDKVKIIV+LKGRENEFRN AIELIRRFQ DVGELATEESKNF  RNIF
Sbjct: 181  RLKAARKFLQDGDKVKIIVNLKGRENEFRNIAIELIRRFQNDVGELATEESKNFSVRNIF 240

Query: 549  IILVPNKAIAQKAQEPPKKKDNTVADEVSASV 454
            I+LVPNKA+ QK QE  KK + + A E+SA V
Sbjct: 241  IVLVPNKALLQKGQESSKKTEKSAATEISAGV 272


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