BLASTX nr result

ID: Scutellaria24_contig00003158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003158
         (753 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like prote...   162   5e-38
ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like prote...   161   1e-37
gb|AFK41754.1| unknown [Lotus japonicus]                              161   1e-37
gb|AFK37213.1| unknown [Medicago truncatula]                          161   1e-37
ref|XP_002299989.1| predicted protein [Populus trichocarpa] gi|2...   161   1e-37

>ref|XP_002285668.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5 isoform 1
           [Vitis vinifera] gi|297741927|emb|CBI33362.3| unnamed
           protein product [Vitis vinifera]
          Length = 87

 Score =  162 bits (411), Expect = 5e-38
 Identities = 80/81 (98%), Positives = 80/81 (98%)
 Frame = +3

Query: 192 QLFPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLD 371
           QL PSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLD
Sbjct: 7   QLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLD 66

Query: 372 QILLNGNNIAILVPGGSPDPE 434
           QILLNGNNIAILVPGGSPDPE
Sbjct: 67  QILLNGNNIAILVPGGSPDPE 87


>ref|XP_004152020.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus] gi|449522508|ref|XP_004168268.1| PREDICTED: U6
           snRNA-associated Sm-like protein LSm5-like [Cucumis
           sativus]
          Length = 87

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/81 (97%), Positives = 80/81 (98%)
 Frame = +3

Query: 192 QLFPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLD 371
           QL PSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLD
Sbjct: 7   QLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLD 66

Query: 372 QILLNGNNIAILVPGGSPDPE 434
           QILLNGNNIAILVPGGSPDPE
Sbjct: 67  QILLNGNNIAILVPGGSPDPE 87


>gb|AFK41754.1| unknown [Lotus japonicus]
          Length = 87

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/81 (97%), Positives = 80/81 (98%)
 Frame = +3

Query: 192 QLFPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLD 371
           QL PSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLD
Sbjct: 7   QLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLD 66

Query: 372 QILLNGNNIAILVPGGSPDPE 434
           QILLNGNNIAILVPGGSPDPE
Sbjct: 67  QILLNGNNIAILVPGGSPDPE 87


>gb|AFK37213.1| unknown [Medicago truncatula]
          Length = 87

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/81 (97%), Positives = 80/81 (98%)
 Frame = +3

Query: 192 QLFPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLD 371
           QL PSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLD
Sbjct: 7   QLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLD 66

Query: 372 QILLNGNNIAILVPGGSPDPE 434
           QILLNGNNIAILVPGGSPDPE
Sbjct: 67  QILLNGNNIAILVPGGSPDPE 87


>ref|XP_002299989.1| predicted protein [Populus trichocarpa]
           gi|224103927|ref|XP_002313247.1| predicted protein
           [Populus trichocarpa] gi|118484238|gb|ABK93999.1|
           unknown [Populus trichocarpa]
           gi|222847247|gb|EEE84794.1| predicted protein [Populus
           trichocarpa] gi|222849655|gb|EEE87202.1| predicted
           protein [Populus trichocarpa]
          Length = 88

 Score =  161 bits (408), Expect = 1e-37
 Identities = 79/81 (97%), Positives = 80/81 (98%)
 Frame = +3

Query: 192 QLFPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITSEGRRITKLD 371
           QL PSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEIT+EGRRITKLD
Sbjct: 8   QLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLD 67

Query: 372 QILLNGNNIAILVPGGSPDPE 434
           QILLNGNNIAILVPGGSPDPE
Sbjct: 68  QILLNGNNIAILVPGGSPDPE 88


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