BLASTX nr result

ID: Scutellaria24_contig00003051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00003051
         (338 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III s...    80   2e-13
emb|CBI22720.3| unnamed protein product [Vitis vinifera]               80   2e-13
ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|2...    77   2e-12
ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III s...    74   2e-11
ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III s...    74   2e-11

>ref|XP_002267664.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC3 [Vitis
           vinifera]
          Length = 511

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 12/98 (12%)
 Frame = -1

Query: 332 KILYKLWKDEYIHMEKVL---TKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQK 162
           KILY+LWKDEY+ MEK+    +++ Q  LW+V + +L    ++  Y +ALNL LR+A++ 
Sbjct: 403 KILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYEL 462

Query: 161 DREKEVVQTAEER---------ERLEKVREIFESSLMK 75
           ++E+E++Q   E+         ERL KVR + ESSLMK
Sbjct: 463 EQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMK 500


>emb|CBI22720.3| unnamed protein product [Vitis vinifera]
          Length = 524

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 42/98 (42%), Positives = 64/98 (65%), Gaps = 12/98 (12%)
 Frame = -1

Query: 332 KILYKLWKDEYIHMEKVL---TKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQK 162
           KILY+LWKDEY+ MEK+    +++ Q  LW+V + +L    ++  Y +ALNL LR+A++ 
Sbjct: 416 KILYQLWKDEYLQMEKLNLHGSRQSQFLLWKVTKDTLWGHVLNEMYHSALNLSLRVAYEL 475

Query: 161 DREKEVVQTAEER---------ERLEKVREIFESSLMK 75
           ++E+E++Q   E+         ERL KVR + ESSLMK
Sbjct: 476 EQEQEIIQLPREKRVGALGNRFERLRKVRILLESSLMK 513


>ref|XP_002321920.1| predicted protein [Populus trichocarpa] gi|222868916|gb|EEF06047.1|
           predicted protein [Populus trichocarpa]
          Length = 519

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 38/91 (41%), Positives = 61/91 (67%), Gaps = 6/91 (6%)
 Frame = -1

Query: 329 ILYKLWKDEYIHMEKVLTKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAHQKDREK 150
           IL K+W+ +Y+ MEK++    Q  LW+VN  +LRE+ +D  + AALNL LR+A++ +++K
Sbjct: 418 ILSKMWQGDYLQMEKLIAGPTQFLLWKVNMINLRERVLDDMFHAALNLSLRVAYELEQQK 477

Query: 149 EVVQTA------EERERLEKVREIFESSLMK 75
           E++         E+ E+L+KVR + ESS MK
Sbjct: 478 EILHLGVDGPMKEKYEKLKKVRFLLESSRMK 508


>ref|XP_004168254.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Cucumis sativus]
          Length = 518

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 12/100 (12%)
 Frame = -1

Query: 338 AIKILYKLWKDEYIHMEKV---LTKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAH 168
           A KILY+LWKDEY++MEKV   + +     LWRV+  +L E  +D  Y A+LNL+LR+AH
Sbjct: 408 APKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAH 467

Query: 167 QKDREKEVVQTAEER---------ERLEKVREIFESSLMK 75
           + +  KE++   ++             E VR +  SSL+K
Sbjct: 468 EIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVK 507


>ref|XP_004140835.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC3-like
           [Cucumis sativus]
          Length = 518

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 40/100 (40%), Positives = 59/100 (59%), Gaps = 12/100 (12%)
 Frame = -1

Query: 338 AIKILYKLWKDEYIHMEKV---LTKELQIFLWRVNEQSLREQFVDASYDAALNLRLRIAH 168
           A KILY+LWKDEY++MEKV   + +     LWRV+  +L E  +D  Y A+LNL+LR+AH
Sbjct: 408 APKILYRLWKDEYLYMEKVALTVPRHSLCLLWRVDRYNLWEHVLDEMYHASLNLQLRLAH 467

Query: 167 QKDREKEVVQTAEER---------ERLEKVREIFESSLMK 75
           + +  KE++   ++             E VR +  SSL+K
Sbjct: 468 EIEENKELLSLPKDNNNKPLVKKMHHFENVRNLLRSSLVK 507


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