BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002959
         (800 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, ...   187   2e-45
ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloro...   179   6e-43
ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloro...   177   2e-42
gb|ABK95755.1| unknown [Populus trichocarpa]                          177   2e-42
gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]      176   7e-42

>sp|P30956.1|RK28_TOBAC RecName: Full=50S ribosomal protein L28, chloroplastic; AltName:
           Full=CL28; Flags: Precursor gi|279656|pir||R5NT28
           ribosomal protein L28 precursor, chloroplast - tobacco
           gi|189096147|pdb|3BBO|Y Chain Y, Homology Model For The
           Spinach Chloroplast 50s Subunit Fitted To 9.4a Cryo-Em
           Map Of The 70s Chlororibosome gi|20016|emb|CAA48211.1|
           ribosomal protein CL28 [Nicotiana tabacum]
          Length = 151

 Score =  187 bits (475), Expect = 2e-45
 Identities = 95/127 (74%), Positives = 105/127 (82%)
 Frame = +3

Query: 195 RLSLKSARTSLEIGFVASQLSGIKISSMEFEKIVPTAISAPLRPSLQPVARRVCPFTGKK 374
           R SL  ++ S E+ FV SQLSG+KISS  F       +S P +PSLQPVARR+CPFTGKK
Sbjct: 26  RASLPQSKLSSELSFVTSQLSGLKISSTHFISS-SAPLSVPFKPSLQPVARRICPFTGKK 84

Query: 375 PNKANKVSHSNHKTIRRQFVNLQYKRIWWEAGKRFVKLRLSTKAIKTIEKNGLDAVAKKA 554
            N+ANKVSHSNHKT + QFVNLQYKRIWWEAGKR+VKLRLSTKAIKTIEKNGLDAVAKKA
Sbjct: 85  SNRANKVSHSNHKTKKLQFVNLQYKRIWWEAGKRYVKLRLSTKAIKTIEKNGLDAVAKKA 144

Query: 555 GIDLRKK 575
           GIDL KK
Sbjct: 145 GIDLSKK 151


>ref|XP_004170905.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  179 bits (454), Expect = 6e-43
 Identities = 92/121 (76%), Positives = 105/121 (86%), Gaps = 1/121 (0%)
 Frame = +3

Query: 216 RTSLEIGFVASQLSGIKISSMEFEKIVPTAIS-APLRPSLQPVARRVCPFTGKKPNKANK 392
           + S ++GF+ SQLSGI+ISS     I P++IS APLRPSLQPVARR+CPFTGKK NK N 
Sbjct: 31  KPSSDLGFLTSQLSGIRISS-NHSLISPSSISTAPLRPSLQPVARRICPFTGKKANKKNL 89

Query: 393 VSHSNHKTIRRQFVNLQYKRIWWEAGKRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRK 572
           VS SNHKT + QFVNLQYK++WWEAGKRFVKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK
Sbjct: 90  VSFSNHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRK 149

Query: 573 K 575
           +
Sbjct: 150 E 150


>ref|XP_004134049.1| PREDICTED: 50S ribosomal protein L28, chloroplastic-like [Cucumis
           sativus]
          Length = 150

 Score =  177 bits (450), Expect = 2e-42
 Identities = 91/117 (77%), Positives = 102/117 (87%), Gaps = 1/117 (0%)
 Frame = +3

Query: 228 EIGFVASQLSGIKISSMEFEKIVPTAIS-APLRPSLQPVARRVCPFTGKKPNKANKVSHS 404
           ++GF+ SQLSGI+ISS     I P +IS APLRPSLQPVARR+CPFTGKK NK N VS S
Sbjct: 35  DLGFLTSQLSGIRISS-NHSLISPASISTAPLRPSLQPVARRICPFTGKKANKKNLVSFS 93

Query: 405 NHKTIRRQFVNLQYKRIWWEAGKRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRKK 575
           NHKT + QFVNLQYK++WWEAGKRFVKLRLSTKA+KTIEKNGLDAVAKKAGIDLRK+
Sbjct: 94  NHKTKKLQFVNLQYKKVWWEAGKRFVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKE 150


>gb|ABK95755.1| unknown [Populus trichocarpa]
          Length = 150

 Score =  177 bits (450), Expect = 2e-42
 Identities = 104/159 (65%), Positives = 120/159 (75%), Gaps = 8/159 (5%)
 Frame = +3

Query: 123 MATISAIIGPAMVGVAAGKS---QNVGRLSLKSARTSL----EIGFVASQLSGIKISSME 281
           MAT +  IG  + GV  G S   +   +LS+  ++TSL    EIGFV SQLSGI+IS   
Sbjct: 1   MATTA--IGVGVGGVLLGNSICFRKTRQLSI--SKTSLVSVSEIGFVTSQLSGIRISYNP 56

Query: 282 FEKIVPTAISAPLRPSLQPV-ARRVCPFTGKKPNKANKVSHSNHKTIRRQFVNLQYKRIW 458
                P  +SAP  P+LQPV ARR+CPFTGKK N+ANKVS SNHKT + QFVNLQYKR+W
Sbjct: 57  -----PKPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRVW 111

Query: 459 WEAGKRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRKK 575
           WEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRKK
Sbjct: 112 WEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 150


>gb|ABK96762.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 153

 Score =  176 bits (445), Expect = 7e-42
 Identities = 103/160 (64%), Positives = 120/160 (75%), Gaps = 9/160 (5%)
 Frame = +3

Query: 123 MATISAIIGPAMVG-VAAGKS---QNVGRLSLKSARTSL----EIGFVASQLSGIKISSM 278
           MAT +  +G  + G V  G S   +   +LS+  ++TSL    EIGFV SQLSGI+IS  
Sbjct: 1   MATTAIGVGVGVGGGVLLGNSICFRKTQQLSI--SKTSLVSVSEIGFVTSQLSGIRISYN 58

Query: 279 EFEKIVPTAISAPLRPSLQPV-ARRVCPFTGKKPNKANKVSHSNHKTIRRQFVNLQYKRI 455
                 P  +SAP  P+LQPV ARR+CPFTGKK N+ANKVS SNHKT + QFVNLQYKR+
Sbjct: 59  P-----PEPLSAPFSPALQPVIARRICPFTGKKANRANKVSFSNHKTKKLQFVNLQYKRV 113

Query: 456 WWEAGKRFVKLRLSTKAIKTIEKNGLDAVAKKAGIDLRKK 575
           WWEAGKR+VKLRLSTKA+KTIEKNGLDAVAKKAGIDLRKK
Sbjct: 114 WWEAGKRYVKLRLSTKALKTIEKNGLDAVAKKAGIDLRKK 153