BLASTX nr result

ID: Scutellaria24_contig00002907 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002907
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containi...    95   5e-18
ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    95   7e-18
ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containi...    95   7e-18
ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containi...    92   3e-17
ref|XP_002525196.1| pentatricopeptide repeat-containing protein,...    91   7e-17

>ref|XP_002273255.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic [Vitis vinifera]
           gi|297741486|emb|CBI32618.3| unnamed protein product
           [Vitis vinifera]
          Length = 842

 Score = 95.1 bits (235), Expect = 5e-18
 Identities = 45/62 (72%), Positives = 54/62 (87%)
 Frame = +1

Query: 55  QKLGVTADITSRNILLKSCCLASKVELAQDIYEEIRELESKGELKLDVFTYSTIVKVFAD 234
           Q LGVTAD+ S NILLK+CC+A +V+LAQ+IY E++ LES G LKLDVFTYSTI+KVFAD
Sbjct: 305 QNLGVTADMASYNILLKACCVAGRVDLAQEIYREVQNLESNGMLKLDVFTYSTIIKVFAD 364

Query: 235 AK 240
           AK
Sbjct: 365 AK 366


>ref|XP_004167767.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g02830, chloroplastic-like [Cucumis sativus]
          Length = 855

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/62 (74%), Positives = 53/62 (85%)
 Frame = +1

Query: 55  QKLGVTADITSRNILLKSCCLASKVELAQDIYEEIRELESKGELKLDVFTYSTIVKVFAD 234
           Q LGV AD+ S NILLK+CCLA +V+LAQDIY E++ LE+ G LKLDVFTYSTIVKVFAD
Sbjct: 321 QNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTGVLKLDVFTYSTIVKVFAD 380

Query: 235 AK 240
           AK
Sbjct: 381 AK 382


>ref|XP_004142106.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score = 94.7 bits (234), Expect = 7e-18
 Identities = 46/62 (74%), Positives = 53/62 (85%)
 Frame = +1

Query: 55  QKLGVTADITSRNILLKSCCLASKVELAQDIYEEIRELESKGELKLDVFTYSTIVKVFAD 234
           Q LGV AD+ S NILLK+CCLA +V+LAQDIY E++ LE+ G LKLDVFTYSTIVKVFAD
Sbjct: 321 QNLGVPADMASYNILLKACCLAGRVDLAQDIYREVKHLETTGVLKLDVFTYSTIVKVFAD 380

Query: 235 AK 240
           AK
Sbjct: 381 AK 382


>ref|XP_003554352.1| PREDICTED: pentatricopeptide repeat-containing protein At5g02830,
           chloroplastic-like [Glycine max]
          Length = 811

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 43/62 (69%), Positives = 53/62 (85%)
 Frame = +1

Query: 55  QKLGVTADITSRNILLKSCCLASKVELAQDIYEEIRELESKGELKLDVFTYSTIVKVFAD 234
           Q LG+  D+TS NILLK+CC+A +V+LAQDIY E++ LES G+LKLDVFTYSTI+KVFAD
Sbjct: 287 QNLGLKPDMTSYNILLKACCVAGRVDLAQDIYRELKHLESVGQLKLDVFTYSTIIKVFAD 346

Query: 235 AK 240
            K
Sbjct: 347 VK 348


>ref|XP_002525196.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535493|gb|EEF37162.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 786

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 46/69 (66%), Positives = 54/69 (78%)
 Frame = +1

Query: 34  IHSNECFQKLGVTADITSRNILLKSCCLASKVELAQDIYEEIRELESKGELKLDVFTYST 213
           +H  +  Q LGVTAD+TS NILLKSC LA KV+LAQDIY E ++LE  G LKLD FTY T
Sbjct: 242 LHVYKKMQNLGVTADMTSYNILLKSCSLAGKVDLAQDIYREAKQLELAGLLKLDDFTYCT 301

Query: 214 IVKVFADAK 240
           I+K+FADAK
Sbjct: 302 IIKIFADAK 310


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