BLASTX nr result

ID: Scutellaria24_contig00002899 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002899
         (510 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast prec...    67   2e-09
ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloropl...    65   8e-09
ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [S...    63   2e-08
gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japo...    63   2e-08
ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea ma...    63   2e-08

>ref|XP_002510018.1| 50S ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis] gi|223550719|gb|EEF52205.1| 50S
           ribosomal protein CL25, chloroplast precursor, putative
           [Ricinus communis]
          Length = 126

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 2/92 (2%)
 Frame = -2

Query: 494 MSVSAIFGSRLVVXXXXXXXXXXXXXPQ--RLALXXXXXXXGLVIECSSRPQKKATKHHM 321
           MS+S+IFGS +V+                 + A        GLVIECSSRP+KKAT HHM
Sbjct: 1   MSISSIFGSPVVLLSKASLKQLNVEVKSAPKTATGNGWYSGGLVIECSSRPKKKATAHHM 60

Query: 320 KTRPRKSRPSDINRRXXXXXXXXXXXPEWSLV 225
           KTRP+KS+P DI R+           P+W+LV
Sbjct: 61  KTRPKKSQPWDIRRKPTVYPPLPPLPPDWTLV 92


>ref|XP_002277800.1| PREDICTED: 50S ribosomal protein 6, chloroplastic [Vitis vinifera]
          Length = 108

 Score = 64.7 bits (156), Expect = 8e-09
 Identities = 39/90 (43%), Positives = 46/90 (51%)
 Frame = -2

Query: 494 MSVSAIFGSRLVVXXXXXXXXXXXXXPQRLALXXXXXXXGLVIECSSRPQKKATKHHMKT 315
           MS+SAIFG+ +                 RL           VIECSSRPQKK T HHMKT
Sbjct: 1   MSISAIFGAAVPNRCSTAASFGARKAAPRLG------GGAAVIECSSRPQKKGTSHHMKT 54

Query: 314 RPRKSRPSDINRRXXXXXXXXXXXPEWSLV 225
           RPRK++P DI RR           PEW++V
Sbjct: 55  RPRKTQPWDIKRRPTVYAPLPPLPPEWTVV 84


>ref|XP_002456091.1| hypothetical protein SORBIDRAFT_03g030290 [Sorghum bicolor]
           gi|241928066|gb|EES01211.1| hypothetical protein
           SORBIDRAFT_03g030290 [Sorghum bicolor]
          Length = 123

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -2

Query: 374 LVIECSSRPQKKATKHHMKTRPRKSRPSDINRRXXXXXXXXXXXPEWSLV 225
           L +ECSSRPQKK TKHHMKTRP+K++P DI RR           P+W+LV
Sbjct: 43  LAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPPLPPDWTLV 92


>gb|EEE52269.1| hypothetical protein OsJ_34231 [Oryza sativa Japonica Group]
          Length = 127

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 30/50 (60%), Positives = 35/50 (70%)
 Frame = -2

Query: 374 LVIECSSRPQKKATKHHMKTRPRKSRPSDINRRXXXXXXXXXXXPEWSLV 225
           L +ECSSRPQKKATKHHMKTRP+KS+P D  RR           P+W+LV
Sbjct: 39  LAVECSSRPQKKATKHHMKTRPKKSQPWDRKRRPTQYRPLPALRPDWTLV 88


>ref|NP_001150884.1| plastid-specific ribosomal protein 6 [Zea mays]
           gi|195642604|gb|ACG40770.1| plastid-specific ribosomal
           protein 6 precursor [Zea mays]
          Length = 123

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 29/50 (58%), Positives = 35/50 (70%)
 Frame = -2

Query: 374 LVIECSSRPQKKATKHHMKTRPRKSRPSDINRRXXXXXXXXXXXPEWSLV 225
           L +ECSSRPQKK TKHHMKTRP+K++P DI RR           P+W+LV
Sbjct: 45  LAVECSSRPQKKGTKHHMKTRPKKTQPWDIKRRPTQYPPLPPLPPDWTLV 94


Top