BLASTX nr result
ID: Scutellaria24_contig00002890
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00002890
(597 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloro... 116 3e-24
ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus com... 114 1e-23
gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides] 112 4e-23
sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, ... 109 3e-22
gb|AEL99217.1| 50S ribosomal protein L27, partial [Silene latifo... 108 5e-22
>ref|XP_004138618.1| PREDICTED: 50S ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449441698|ref|XP_004138619.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
gi|449518795|ref|XP_004166421.1| PREDICTED: 50S
ribosomal protein L27, chloroplastic-like isoform 1
[Cucumis sativus] gi|449518797|ref|XP_004166422.1|
PREDICTED: 50S ribosomal protein L27, chloroplastic-like
isoform 2 [Cucumis sativus]
Length = 183
Score = 116 bits (290), Expect = 3e-24
Identities = 54/67 (80%), Positives = 61/67 (91%)
Frame = -1
Query: 201 DHTLFSLIDGLVKFEKYGPDKKKVSVYPRVVQPENPNSHKVRKREAFKLQRERRKARKEG 22
DHT+FSLIDGLVKFEKYGPDKKKVSVYPR VQPENPNS++ RKRE F+LQRER+KARKEG
Sbjct: 103 DHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKREYFRLQRERKKARKEG 162
Query: 21 TYFEPKL 1
+P+L
Sbjct: 163 IIAQPQL 169
Score = 102 bits (255), Expect = 4e-20
Identities = 52/81 (64%), Positives = 61/81 (75%)
Frame = -3
Query: 571 LSFNLAGAFKGLSMGXXXXXSFFRGDFASIHVGQNVAVSVPMKSPLTIESAHKKGAGSTK 392
++ NL +FKGLS+ FF+GDF SIH ++VS P PLTIE+AHKKGAGSTK
Sbjct: 1 MTLNLLSSFKGLSLASSSS--FFKGDFGSIHTSPKLSVSFPNIFPLTIENAHKKGAGSTK 58
Query: 391 NGRDSPGQRLGVKIYGDQVAK 329
NGRDS GQRLGVKI+GDQVAK
Sbjct: 59 NGRDSKGQRLGVKIFGDQVAK 79
>ref|XP_002509506.1| ribosomal protein L27, putative [Ricinus communis]
gi|223549405|gb|EEF50893.1| ribosomal protein L27,
putative [Ricinus communis]
Length = 195
Score = 114 bits (286), Expect = 1e-23
Identities = 53/67 (79%), Positives = 61/67 (91%)
Frame = -1
Query: 201 DHTLFSLIDGLVKFEKYGPDKKKVSVYPRVVQPENPNSHKVRKREAFKLQRERRKARKEG 22
DHT+FSLIDGLVKFEK+GPD+KKVSVYPR VQPENPNS++ RKRE F+LQRER+KARKEG
Sbjct: 114 DHTIFSLIDGLVKFEKFGPDRKKVSVYPREVQPENPNSYRARKREYFRLQRERKKARKEG 173
Query: 21 TYFEPKL 1
EP+L
Sbjct: 174 LIAEPQL 180
Score = 94.4 bits (233), Expect = 1e-17
Identities = 53/87 (60%), Positives = 66/87 (75%), Gaps = 3/87 (3%)
Frame = -3
Query: 580 AVSLSFNLAGAFKGLSMGXXXXXSFFRGDFA-SIHVGQNVAVSVPMKSP--LTIESAHKK 410
A ++SFNL G FKGLS+ FF+GD ++ + +N VS+P+K+P LTIE AHKK
Sbjct: 7 AGAISFNLIGTFKGLSLSSSSS--FFKGDTTLNLSLSRN-CVSLPLKAPFPLTIEMAHKK 63
Query: 409 GAGSTKNGRDSPGQRLGVKIYGDQVAK 329
GAGSTKNGRDSPGQRLGVKI+G+Q AK
Sbjct: 64 GAGSTKNGRDSPGQRLGVKIFGNQAAK 90
>gb|ABK96514.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 197
Score = 112 bits (281), Expect = 4e-23
Identities = 50/67 (74%), Positives = 61/67 (91%)
Frame = -1
Query: 201 DHTLFSLIDGLVKFEKYGPDKKKVSVYPRVVQPENPNSHKVRKREAFKLQRERRKARKEG 22
DHT+FSLIDGLVKFEK+GPD+KK+SVYPR +QPENPNS++ RKRE F+LQRER+KARKEG
Sbjct: 116 DHTIFSLIDGLVKFEKFGPDRKKISVYPREIQPENPNSYRARKRENFRLQRERKKARKEG 175
Query: 21 TYFEPKL 1
+P+L
Sbjct: 176 IVAQPQL 182
Score = 101 bits (251), Expect = 1e-19
Identities = 53/92 (57%), Positives = 65/92 (70%), Gaps = 6/92 (6%)
Frame = -3
Query: 586 MAAVSLSFNLAGAFKGLSMGXXXXXSFFRGDFASIHVGQNVAVSVPMKSP------LTIE 425
MA +++SFNL G+FKGLS+ SFF+GD S+ G + +P K+P LTI+
Sbjct: 1 MALMAVSFNLIGSFKGLSLSSSSSSSFFKGDAGSLKFGLKSSALLPFKAPVKAPLPLTIQ 60
Query: 424 SAHKKGAGSTKNGRDSPGQRLGVKIYGDQVAK 329
AHKKGAGSTKNGRDS G+RLGVKIYGDQ AK
Sbjct: 61 MAHKKGAGSTKNGRDSKGKRLGVKIYGDQAAK 92
>sp|P30155.1|RK27_TOBAC RecName: Full=50S ribosomal protein L27, chloroplastic; AltName:
Full=CL27; Flags: Precursor gi|170306|gb|AAA34104.1|
ribosomal protein L27 [Nicotiana tabacum]
gi|170326|gb|AAA34115.1| ribosomal protein L27
[Nicotiana tabacum]
Length = 179
Score = 109 bits (273), Expect = 3e-22
Identities = 49/64 (76%), Positives = 59/64 (92%)
Frame = -1
Query: 201 DHTLFSLIDGLVKFEKYGPDKKKVSVYPRVVQPENPNSHKVRKREAFKLQRERRKARKEG 22
DHT+FSLIDGLVKFEK+GPD+KK+SVYPR VQPENPNS++ RKRE+F+LQRERRKAR+EG
Sbjct: 106 DHTIFSLIDGLVKFEKFGPDRKKISVYPREVQPENPNSYRNRKRESFRLQRERRKARREG 165
Query: 21 TYFE 10
+
Sbjct: 166 VILQ 169
Score = 108 bits (270), Expect = 7e-22
Identities = 57/84 (67%), Positives = 67/84 (79%), Gaps = 1/84 (1%)
Frame = -3
Query: 577 VSLSFNLAGAFKGLSMGXXXXXSFFRGDF-ASIHVGQNVAVSVPMKSPLTIESAHKKGAG 401
+++SF+L GAFKGLS+ F +GDF A+ V +VS P+KSPLTIESAHKKGAG
Sbjct: 1 MAVSFSLVGAFKGLSLASSSS--FLKGDFGAAFPVAPKFSVSFPLKSPLTIESAHKKGAG 58
Query: 400 STKNGRDSPGQRLGVKIYGDQVAK 329
STKNGRDSPGQRLGVKI+GDQVAK
Sbjct: 59 STKNGRDSPGQRLGVKIFGDQVAK 82
>gb|AEL99217.1| 50S ribosomal protein L27, partial [Silene latifolia]
gi|343173030|gb|AEL99218.1| 50S ribosomal protein L27,
partial [Silene latifolia]
Length = 170
Score = 108 bits (271), Expect = 5e-22
Identities = 50/59 (84%), Positives = 56/59 (94%)
Frame = -1
Query: 201 DHTLFSLIDGLVKFEKYGPDKKKVSVYPRVVQPENPNSHKVRKREAFKLQRERRKARKE 25
DHT+FSLIDGLVKFEKYGPDKKKVSVYPR VQPENPNS++ RKRE F+LQRE++KARKE
Sbjct: 112 DHTIFSLIDGLVKFEKYGPDKKKVSVYPREVQPENPNSYRARKRENFRLQREKKKARKE 170
Score = 86.3 bits (212), Expect = 4e-15
Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Frame = -3
Query: 580 AVSLSFNLAGAFKGLSMGXXXXXSFFRGDFASIHV---GQNVAVSVPMKSPLTIESAHKK 410
A S++ NL +FKGLS+ SF +G+F + + Q++ +P LTIESAHKK
Sbjct: 4 ATSMALNLMVSFKGLSLSSSSSSSFVKGEFGAPTLTLPAQSIQPLLPYG--LTIESAHKK 61
Query: 409 GAGSTKNGRDSPGQRLGVKIYGDQVAK 329
GAGSTKNGRDS GQRLGVKIYGDQ+AK
Sbjct: 62 GAGSTKNGRDSKGQRLGVKIYGDQLAK 88