BLASTX nr result

ID: Scutellaria24_contig00002792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002792
         (797 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|35549647...   236   4e-60
ref|XP_004065827.1| PREDICTED: histone H3.2-like [Oryzias latipes]    230   2e-58
ref|XP_003225055.1| PREDICTED: histone H3.2-like, partial [Anoli...   230   3e-58
tpg|DAA55311.1| TPA: histone H3.2 [Zea mays]                          229   5e-58
gb|AFW58221.1| histone H3.2 [Zea mays]                                229   5e-58

>ref|XP_003621457.1| Histone H3 [Medicago truncatula] gi|355496472|gb|AES77675.1|
           Histone H3 [Medicago truncatula]
          Length = 235

 Score =  236 bits (602), Expect = 4e-60
 Identities = 132/189 (69%), Positives = 137/189 (72%), Gaps = 17/189 (8%)
 Frame = +1

Query: 43  PHFREPLYKSSSKPFSL-----FIHSHSNR------------IFSIFTFKASDMARTKQT 171
           P   + L+ S   P S+     F+HSH N             IF +  F    MARTKQT
Sbjct: 47  PKTSQNLHNSRFFPHSINSQKHFLHSHRNLKSHSLSQLNKTPIFFLSNFSLFPMARTKQT 106

Query: 172 ARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLP 351
           ARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLP
Sbjct: 107 ARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLP 166

Query: 352 FQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQL 531
           FQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQL
Sbjct: 167 FQRLVREIAQDFKTDLRFQSSAVSALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQL 226

Query: 532 ARRIRGERA 558
           ARRIRGERA
Sbjct: 227 ARRIRGERA 235


>ref|XP_004065827.1| PREDICTED: histone H3.2-like [Oryzias latipes]
          Length = 151

 Score =  230 bits (587), Expect = 2e-58
 Identities = 120/140 (85%), Positives = 122/140 (87%)
 Frame = +1

Query: 139 KASDMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQ 318
           KAS MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGTVALREIR+YQ
Sbjct: 12  KASKMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQ 71

Query: 319 KSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAK 498
           KSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAK
Sbjct: 72  KSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFEDTNLCAIHAK 131

Query: 499 RVTIMPKDIQLARRIRGERA 558
           RVTIMPKDIQLARRIRGERA
Sbjct: 132 RVTIMPKDIQLARRIRGERA 151


>ref|XP_003225055.1| PREDICTED: histone H3.2-like, partial [Anolis carolinensis]
          Length = 154

 Score =  230 bits (586), Expect = 3e-58
 Identities = 123/150 (82%), Positives = 125/150 (83%)
 Frame = +1

Query: 109 SNRIFSIFTFKASDMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGT 288
           SNR   IF   A  MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHR+RPGT
Sbjct: 7   SNRPLGIFELPA--MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGT 64

Query: 289 VALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFE 468
           VALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFE
Sbjct: 65  VALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEASEAYLVGLFE 124

Query: 469 DTNLCAIHAKRVTIMPKDIQLARRIRGERA 558
           DTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct: 125 DTNLCAIHAKRVTIMPKDIQLARRIRGERA 154


>tpg|DAA55311.1| TPA: histone H3.2 [Zea mays]
          Length = 245

 Score =  229 bits (584), Expect = 5e-58
 Identities = 120/138 (86%), Positives = 120/138 (86%)
 Frame = +1

Query: 145 SDMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 324
           S MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 108 SPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 167

Query: 325 TELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRV 504
           TELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRV
Sbjct: 168 TELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 227

Query: 505 TIMPKDIQLARRIRGERA 558
           TIMPKDIQLARRIRGERA
Sbjct: 228 TIMPKDIQLARRIRGERA 245


>gb|AFW58221.1| histone H3.2 [Zea mays]
          Length = 171

 Score =  229 bits (584), Expect = 5e-58
 Identities = 120/138 (86%), Positives = 120/138 (86%)
 Frame = +1

Query: 145 SDMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 324
           S MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS
Sbjct: 34  SPMARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKS 93

Query: 325 TELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRV 504
           TELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRV
Sbjct: 94  TELLIRKLPFQRLVREIAQDFKTDLRFQSSAVAALQEAAEAYLVGLFEDTNLCAIHAKRV 153

Query: 505 TIMPKDIQLARRIRGERA 558
           TIMPKDIQLARRIRGERA
Sbjct: 154 TIMPKDIQLARRIRGERA 171


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