BLASTX nr result

ID: Scutellaria24_contig00002658 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002658
         (1857 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cy...   380   e-103
ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|2...   365   2e-98
emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]              364   5e-98
ref|XP_002316790.1| predicted protein [Populus trichocarpa] gi|2...   359   1e-96
ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cy...   358   2e-96

>ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
            [Vitis vinifera] gi|296088694|emb|CBI38144.3| unnamed
            protein product [Vitis vinifera]
          Length = 292

 Score =  380 bits (976), Expect = e-103
 Identities = 196/275 (71%), Positives = 223/275 (81%), Gaps = 5/275 (1%)
 Frame = +2

Query: 638  DSKSELG---MNDFVDMLKKLELNPQAKEFFPSSFYHNQNGAYAFVP--INKDLGNDGFP 802
            DSKSE G    +  VDML  L+LNP AKEFFPSS+ H+       +P   +KD  ND +P
Sbjct: 22   DSKSEFGAGMQSMIVDMLSNLKLNPLAKEFFPSSYSHDH-----LIPTDFSKDSPNDAYP 76

Query: 803  XXXXXXXXXXXGKKRPNGRAYRAQREDSVRRTVYVSDIDHNITEEQLAALFSGYGQVVDC 982
                       G++R +GRA+RAQREDS+RRTVYVSDID ++TEE+LAALFS  GQVVDC
Sbjct: 77   NNRRRRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDC 136

Query: 983  RVCGDPHSHLRFAFVEFSDDYSARAALGLNGTLLGFSPVKVLPSKTAILPVNPTFLPRSE 1162
            RVCGDPHS LRFAFVEF+D++ ARAAL L GT+LG+ PV+VLPSKTAILPVNPTFLPRSE
Sbjct: 137  RVCGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSE 196

Query: 1163 DEREMCARTVYCTNIDKKVSQADVKNFFEARCGEVSRLRLLGDHLHSTRIAFVEFFMAES 1342
            DEREMCARTVYCTNIDKKVSQA+VKNFFE  CGEVSRLRLLGDH+HSTRIAFVEF MAES
Sbjct: 197  DEREMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAES 256

Query: 1343 AILALDCCGEILGSQRIRVSPSKTPVRPRVPRPGL 1447
            AI+AL+C G +LG+Q IRVSPSKTPVRPRVPR  L
Sbjct: 257  AIVALNCSGLVLGTQPIRVSPSKTPVRPRVPRATL 291


>ref|XP_002298913.1| predicted protein [Populus trichocarpa] gi|222846171|gb|EEE83718.1|
            predicted protein [Populus trichocarpa]
          Length = 307

 Score =  365 bits (937), Expect = 2e-98
 Identities = 197/307 (64%), Positives = 230/307 (74%), Gaps = 4/307 (1%)
 Frame = +2

Query: 539  DNTSSKSEKEIGNFDNSNSGESGVKDSGLNSIMDSKSELGMNDFVDMLKKLELNPQAKEF 718
            +NT++ + K     DN+N+ +S  K +       S+SE  +   VDM  KL  NP AKEF
Sbjct: 16   NNTTTAANKN----DNNNNLDSETKPT-------SESEFTVQKLVDMFTKL--NPLAKEF 62

Query: 719  FPSSFYHNQNGAYAF----VPINKDLGNDGFPXXXXXXXXXXXGKKRPNGRAYRAQREDS 886
            FPSS+  N      F    VP+ K   ND FP           G+++ NGRAYRAQ+EDS
Sbjct: 63   FPSSYSKNNPNELHFNNFAVPV-KQSANDNFPKRKRNNFNQ--GRRKLNGRAYRAQQEDS 119

Query: 887  VRRTVYVSDIDHNITEEQLAALFSGYGQVVDCRVCGDPHSHLRFAFVEFSDDYSARAALG 1066
            +RRTVYVSDID ++TEE+LA LFSG GQVVDCRVCGDPHS LRFAFVEF+D+  ARAAL 
Sbjct: 120  IRRTVYVSDIDQHVTEERLAGLFSGCGQVVDCRVCGDPHSVLRFAFVEFADEQGARAALN 179

Query: 1067 LNGTLLGFSPVKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVSQADVKNFF 1246
            L GT+LG+ PV+VLPSKTAILPVNPTFLPRSEDEREMC RTVYCTNIDKKVSQ +VKNFF
Sbjct: 180  LGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCTRTVYCTNIDKKVSQVEVKNFF 239

Query: 1247 EARCGEVSRLRLLGDHLHSTRIAFVEFFMAESAILALDCCGEILGSQRIRVSPSKTPVRP 1426
            E+ CGEV+RLRLLGD +HSTRIAFVEF MAESAI+AL+C G  LGSQ +RVSPSKTPVRP
Sbjct: 240  ESICGEVTRLRLLGDQVHSTRIAFVEFAMAESAIVALNCSGMALGSQPVRVSPSKTPVRP 299

Query: 1427 RVPRPGL 1447
            RV RP +
Sbjct: 300  RVTRPAM 306


>emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
          Length = 201

 Score =  364 bits (934), Expect = 5e-98
 Identities = 176/200 (88%), Positives = 191/200 (95%)
 Frame = +2

Query: 851  NGRAYRAQREDSVRRTVYVSDIDHNITEEQLAALFSGYGQVVDCRVCGDPHSHLRFAFVE 1030
            N RAY+AQREDS+RRTVYV++ID+N+TEEQLAALFS YGQVVDCR+CGDPHS LRFAFVE
Sbjct: 2    NNRAYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFVE 61

Query: 1031 FSDDYSARAALGLNGTLLGFSPVKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNID 1210
            F+D+YSARAAL L GT+LGFSP+KVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNID
Sbjct: 62   FADEYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNID 121

Query: 1211 KKVSQADVKNFFEARCGEVSRLRLLGDHLHSTRIAFVEFFMAESAILALDCCGEILGSQR 1390
            KKV+QADVKNFFE RCGEVSRLRLLGDH+HSTRIAFVEF MAESAILALDCCGEILGSQR
Sbjct: 122  KKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESAILALDCCGEILGSQR 181

Query: 1391 IRVSPSKTPVRPRVPRPGLQ 1450
            IRVSPSKTPVRPR+PR  +Q
Sbjct: 182  IRVSPSKTPVRPRLPRAMMQ 201


>ref|XP_002316790.1| predicted protein [Populus trichocarpa] gi|222859855|gb|EEE97402.1|
            predicted protein [Populus trichocarpa]
          Length = 308

 Score =  359 bits (922), Expect = 1e-96
 Identities = 194/302 (64%), Positives = 224/302 (74%), Gaps = 8/302 (2%)
 Frame = +2

Query: 566  EIGNFDNSNSGESGVKDSGLNSIMD-----SKSELGMNDFVDMLKKLELNPQAKEFFPSS 730
            E+     SNS  +  K+   N++       S+SE  +   VDM  KL  NP AKEFFPSS
Sbjct: 10   EVAVAAKSNSNTTTNKNDNNNNLDSERNPKSESEFTVQKLVDMFTKL--NPLAKEFFPSS 67

Query: 731  FYHNQNGAYA---FVPINKDLGNDGFPXXXXXXXXXXXGKKRPNGRAYRAQREDSVRRTV 901
            +  N    +    F   NK   ND FP           G++R NGRAYRAQREDS+RRTV
Sbjct: 68   YNKNNPKQFHINNFPVPNKQSANDNFPKRRRNDFNQ--GRRRLNGRAYRAQREDSIRRTV 125

Query: 902  YVSDIDHNITEEQLAALFSGYGQVVDCRVCGDPHSHLRFAFVEFSDDYSARAALGLNGTL 1081
            YVSDID ++TEEQLA LFSG GQVVDCR+CGDP S LRFAFVEF+ +  ARAAL L GT+
Sbjct: 126  YVSDIDQHVTEEQLAGLFSGCGQVVDCRICGDPRSVLRFAFVEFAVEQGARAALNLGGTM 185

Query: 1082 LGFSPVKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNIDKKVSQADVKNFFEARCG 1261
            LG+ PV+VLPSKTAILPVNPTFLP+SEDEREMC RTVYCTNI+KKVSQA+VKNFFE+ CG
Sbjct: 186  LGYYPVRVLPSKTAILPVNPTFLPQSEDEREMCTRTVYCTNIEKKVSQAEVKNFFESICG 245

Query: 1262 EVSRLRLLGDHLHSTRIAFVEFFMAESAILALDCCGEILGSQRIRVSPSKTPVRPRVPRP 1441
            EV+RLRLLGDH+HSTRIAFVEF MAESAI+AL+C G +LGSQ +RVSPSKTPVRPRV R 
Sbjct: 246  EVTRLRLLGDHVHSTRIAFVEFAMAESAIVALNCSGMVLGSQPVRVSPSKTPVRPRVTRL 305

Query: 1442 GL 1447
             L
Sbjct: 306  AL 307


>ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
            nuclear-like [Glycine max]
          Length = 296

 Score =  358 bits (920), Expect = 2e-96
 Identities = 184/282 (65%), Positives = 217/282 (76%), Gaps = 13/282 (4%)
 Frame = +2

Query: 635  MDSK----SELGMNDFVDMLKKLELNPQAKEFFPSSFYHNQNGAYA---------FVPIN 775
            MDSK    SE  +   VDM  KL  NP AKEFFPSS+  N +  +          F+   
Sbjct: 14   MDSKPKAESEFSVQKLVDMFTKL--NPLAKEFFPSSYSPNHDNRFQGFNQLSPTHFLVST 71

Query: 776  KDLGNDGFPXXXXXXXXXXXGKKRPNGRAYRAQREDSVRRTVYVSDIDHNITEEQLAALF 955
            K   ++ FP           G+++ +GR+ +AQREDS+RRTVYVS+ID ++TEE+LAALF
Sbjct: 72   KPSADENFPNNRRRRNSFNQGRRKVSGRSLKAQREDSIRRTVYVSEIDQHVTEERLAALF 131

Query: 956  SGYGQVVDCRVCGDPHSHLRFAFVEFSDDYSARAALGLNGTLLGFSPVKVLPSKTAILPV 1135
            S  GQV+DCR+CGDPHS LRFAFVEF+D+Y AR AL L GT+LG+ PV+VLPSKTAILPV
Sbjct: 132  SSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVLGYYPVRVLPSKTAILPV 191

Query: 1136 NPTFLPRSEDEREMCARTVYCTNIDKKVSQADVKNFFEARCGEVSRLRLLGDHLHSTRIA 1315
            NPTFLPRS+DEREMCARTVYCTNIDKKVSQA+VKNFFE+ CGEV RLRLLGDH+HSTRIA
Sbjct: 192  NPTFLPRSDDEREMCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDHVHSTRIA 251

Query: 1316 FVEFFMAESAILALDCCGEILGSQRIRVSPSKTPVRPRVPRP 1441
            FVEF MAESAI+AL+C G +LG+Q IRVSPSKTPVRPRV RP
Sbjct: 252  FVEFAMAESAIIALNCSGMLLGTQPIRVSPSKTPVRPRVTRP 293


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