BLASTX nr result

ID: Scutellaria24_contig00002545 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002545
         (1966 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277445.2| PREDICTED: splicing factor U2af small subuni...   364   4e-98
ref|XP_004171272.1| PREDICTED: splicing factor U2af small subuni...   362   2e-97
ref|XP_004143302.1| PREDICTED: splicing factor U2af small subuni...   362   2e-97
gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]                  362   3e-97
ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, pu...   354   4e-95

>ref|XP_002277445.2| PREDICTED: splicing factor U2af small subunit B-like [Vitis vinifera]
          Length = 343

 Score =  364 bits (935), Expect = 4e-98
 Identities = 169/185 (91%), Positives = 178/185 (96%)
 Frame = +2

Query: 1019 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 1198
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMVTP 60

Query: 1199 GVDPQGQPLDPKKIQSHFEDFYEDLFQELSKYGDIQSLNICDNLADHMVGNVYVQFREED 1378
            GVDPQGQPLDP+KIQ HFEDFYEDLF+ELSKYG+I+SLNICDNLADHMVGNVYVQFREE+
Sbjct: 61   GVDPQGQPLDPRKIQEHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1379 QAQNALQNLVGRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 1558
             A NAL+NL GR Y GRPII DFSPVTDFREATCRQYEEN+CNRGGYCNFMHLKKISREL
Sbjct: 121  HAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENICNRGGYCNFMHLKKISREL 180

Query: 1559 RQQLF 1573
            R+QLF
Sbjct: 181  RRQLF 185


>ref|XP_004171272.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 317

 Score =  362 bits (930), Expect = 2e-97
 Identities = 169/185 (91%), Positives = 177/185 (95%)
 Frame = +2

Query: 1019 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 1198
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 1199 GVDPQGQPLDPKKIQSHFEDFYEDLFQELSKYGDIQSLNICDNLADHMVGNVYVQFREED 1378
            GVDPQGQ LDP+K+Q HFEDFYEDLF+ELSKYGD++SLNICDNLADHMVGNVYVQFREE+
Sbjct: 61   GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 1379 QAQNALQNLVGRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 1558
            QA NAL NL GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
Sbjct: 121  QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1559 RQQLF 1573
            R++LF
Sbjct: 181  RRRLF 185


>ref|XP_004143302.1| PREDICTED: splicing factor U2af small subunit A-like [Cucumis
            sativus]
          Length = 317

 Score =  362 bits (930), Expect = 2e-97
 Identities = 169/185 (91%), Positives = 177/185 (95%)
 Frame = +2

Query: 1019 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 1198
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 60

Query: 1199 GVDPQGQPLDPKKIQSHFEDFYEDLFQELSKYGDIQSLNICDNLADHMVGNVYVQFREED 1378
            GVDPQGQ LDP+K+Q HFEDFYEDLF+ELSKYGD++SLNICDNLADHMVGNVYVQFREE+
Sbjct: 61   GVDPQGQALDPRKVQDHFEDFYEDLFEELSKYGDLESLNICDNLADHMVGNVYVQFREEE 120

Query: 1379 QAQNALQNLVGRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 1558
            QA NAL NL GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
Sbjct: 121  QAANALHNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1559 RQQLF 1573
            R++LF
Sbjct: 181  RRRLF 185


>gb|AAH03883.1| CDNA sequence BC003883 [Mus musculus]
          Length = 310

 Score =  362 bits (928), Expect = 3e-97
 Identities = 169/185 (91%), Positives = 177/185 (95%)
 Frame = +2

Query: 1019 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 1198
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLL+NMYQRPDMITP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLANMYQRPDMITP 60

Query: 1199 GVDPQGQPLDPKKIQSHFEDFYEDLFQELSKYGDIQSLNICDNLADHMVGNVYVQFREED 1378
            GVDPQGQPLDP+KIQ HFEDFYEDLF+ELSKYG+I+SLNICDNLADHMVGNVYVQFREE+
Sbjct: 61   GVDPQGQPLDPRKIQQHFEDFYEDLFEELSKYGEIESLNICDNLADHMVGNVYVQFREEE 120

Query: 1379 QAQNALQNLVGRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 1558
             A  AL+NL GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL
Sbjct: 121  HAGEALRNLSGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISREL 180

Query: 1559 RQQLF 1573
            R+QLF
Sbjct: 181  RRQLF 185


>ref|XP_002528581.1| U2 snrnp auxiliary factor, small subunit, putative [Ricinus communis]
            gi|223531977|gb|EEF33789.1| U2 snrnp auxiliary factor,
            small subunit, putative [Ricinus communis]
          Length = 313

 Score =  354 bits (909), Expect = 4e-95
 Identities = 168/187 (89%), Positives = 176/187 (94%), Gaps = 2/187 (1%)
 Frame = +2

Query: 1019 MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMITP 1198
            MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDM+TP
Sbjct: 1    MAEHLASIFGTEKDRVNCPFYFKIGACRHGDRCSRLHTKPSISPTLLLSNMYQRPDMLTP 60

Query: 1199 GVDPQGQP--LDPKKIQSHFEDFYEDLFQELSKYGDIQSLNICDNLADHMVGNVYVQFRE 1372
            GVDPQ Q   LDP+KIQ HFEDFY+DLF+ELSKYGDI+SLNICDNLADHMVGNVYVQFRE
Sbjct: 61   GVDPQAQSQSLDPRKIQDHFEDFYQDLFEELSKYGDIESLNICDNLADHMVGNVYVQFRE 120

Query: 1373 EDQAQNALQNLVGRSYEGRPIIADFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 1552
            ED A NAL+NL GR Y GRPII DFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR
Sbjct: 121  EDHAANALRNLNGRFYAGRPIIVDFSPVTDFREATCRQYEENVCNRGGYCNFMHLKKISR 180

Query: 1553 ELRQQLF 1573
            ELR++LF
Sbjct: 181  ELRRRLF 187


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