BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002490
         (1335 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD ...   506   e-141
emb|CBI32760.3| unnamed protein product [Vitis vinifera]              506   e-141
ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [...   505   e-141
ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|2...   498   e-138
ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF,...   483   e-134

>ref|XP_002276710.2| PREDICTED: RNA polymerase sigma factor rpoD [Vitis vinifera]
          Length = 572

 Score =  506 bits (1303), Expect = e-141
 Identities = 247/364 (67%), Positives = 300/364 (82%)
 Frame = -2

Query: 1319 RTVRSTRHLERQTKRRRGAEQKVEVQETNNNRKRESHRKSREGYDPNDPLRLFLWGPETT 1140
            +TVRSTR LER++K+RR    KV V E + +R+ E  RK  EGYDP DPLRLFLWGPET 
Sbjct: 213  KTVRSTRLLERRSKKRRNP--KVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETR 270

Query: 1139 QLLTAKEEAELIMKIQDLMKLQEVKNRLHCQFSREPTLVEWAAVVGISCQSLKSQIHCGN 960
            +LLTAKEE+ELI++IQ+LM+L+EVK RL     REPT+VEWA  VG+SCQ L+SQ+H GN
Sbjct: 271  KLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGN 330

Query: 959  SSRERLIYANFRLVVHIAKQYQGRGLNLQDLMQEGSMGLMKSVEKFKPQVGCRFATYAYW 780
             SR++LIYAN R+VVHIAKQYQGRGLNLQDL+QEGSMGLM SVEKFKP  GCRFA+YAYW
Sbjct: 331  RSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYW 390

Query: 779  WIRQSIRKALFQHSRMIRLPENVYGLLSKVYEAKKLCIQQGNHQPTKEDIAAFAGMSVER 600
            WIRQ++RKA+FQHSR IRLPEN+Y LL KV EAK+L IQ+G+H PTKE+IA   G+++E+
Sbjct: 391  WIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEK 450

Query: 599  MEKLLYMARMPLSIQQSVWMDQDTTFQEITADPSIEAPEKGVEKQFMRQHIRNLLSVLNP 420
            +++LL   RMPLS+QQ VW DQDTTFQE+TAD  IE P+  V KQ MRQH+RNLL VL P
Sbjct: 451  LQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTP 510

Query: 419  RERKIIRMRFGFGIEDGKQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLNSHGLAAYS 240
            +ER+IIR+RFG G  DG  ++LSEIG  FG SKERVRQLE RAL+KLKQCL+SHGL +Y+
Sbjct: 511  KERRIIRLRFGIG--DGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYT 568

Query: 239  DMLI 228
            D+L+
Sbjct: 569  DLLV 572


>emb|CBI32760.3| unnamed protein product [Vitis vinifera]
          Length = 561

 Score =  506 bits (1303), Expect = e-141
 Identities = 247/364 (67%), Positives = 300/364 (82%)
 Frame = -2

Query: 1319 RTVRSTRHLERQTKRRRGAEQKVEVQETNNNRKRESHRKSREGYDPNDPLRLFLWGPETT 1140
            +TVRSTR LER++K+RR    KV V E + +R+ E  RK  EGYDP DPLRLFLWGPET 
Sbjct: 202  KTVRSTRLLERRSKKRRNP--KVAVHENHGSRRAEVQRKINEGYDPKDPLRLFLWGPETR 259

Query: 1139 QLLTAKEEAELIMKIQDLMKLQEVKNRLHCQFSREPTLVEWAAVVGISCQSLKSQIHCGN 960
            +LLTAKEE+ELI++IQ+LM+L+EVK RL     REPT+VEWA  VG+SCQ L+SQ+H GN
Sbjct: 260  KLLTAKEESELIVQIQELMRLEEVKKRLQSHLKREPTVVEWAEAVGLSCQVLQSQLHSGN 319

Query: 959  SSRERLIYANFRLVVHIAKQYQGRGLNLQDLMQEGSMGLMKSVEKFKPQVGCRFATYAYW 780
             SR++LIYAN R+VVHIAKQYQGRGLNLQDL+QEGSMGLM SVEKFKP  GCRFA+YAYW
Sbjct: 320  RSRQKLIYANLRMVVHIAKQYQGRGLNLQDLLQEGSMGLMNSVEKFKPNAGCRFASYAYW 379

Query: 779  WIRQSIRKALFQHSRMIRLPENVYGLLSKVYEAKKLCIQQGNHQPTKEDIAAFAGMSVER 600
            WIRQ++RKA+FQHSR IRLPEN+Y LL KV EAK+L IQ+G+H PTKE+IA   G+++E+
Sbjct: 380  WIRQAVRKAIFQHSRTIRLPENMYSLLGKVKEAKRLFIQEGHHDPTKEEIAERVGITIEK 439

Query: 599  MEKLLYMARMPLSIQQSVWMDQDTTFQEITADPSIEAPEKGVEKQFMRQHIRNLLSVLNP 420
            +++LL   RMPLS+QQ VW DQDTTFQE+TAD  IE P+  V KQ MRQH+RNLL VL P
Sbjct: 440  LQRLLLHTRMPLSMQQPVWADQDTTFQEVTADTGIEIPDVSVAKQLMRQHVRNLLHVLTP 499

Query: 419  RERKIIRMRFGFGIEDGKQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLNSHGLAAYS 240
            +ER+IIR+RFG G  DG  ++LSEIG  FG SKERVRQLE RAL+KLKQCL+SHGL +Y+
Sbjct: 500  KERRIIRLRFGIG--DGIPRTLSEIGLVFGFSKERVRQLEQRALHKLKQCLSSHGLESYT 557

Query: 239  DMLI 228
            D+L+
Sbjct: 558  DLLV 561


>ref|XP_002519509.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
            gi|223541372|gb|EEF42923.1| RNA polymerase sigma factor
            rpoD, putative [Ricinus communis]
          Length = 548

 Score =  505 bits (1301), Expect = e-141
 Identities = 250/364 (68%), Positives = 300/364 (82%)
 Frame = -2

Query: 1319 RTVRSTRHLERQTKRRRGAEQKVEVQETNNNRKRESHRKSREGYDPNDPLRLFLWGPETT 1140
            +TVRSTR LERQ+K RR  + K    E  ++R+    +K  EG+DP DPLRLFLWGPET 
Sbjct: 187  KTVRSTRRLERQSKNRRVTKTKEIFHEPYSSRRAGVQKKINEGFDPKDPLRLFLWGPETK 246

Query: 1139 QLLTAKEEAELIMKIQDLMKLQEVKNRLHCQFSREPTLVEWAAVVGISCQSLKSQIHCGN 960
            QLLTAKEE+ELI ++QDLM L+ VK +   QF R+PTLVEWA  VG+S   ++SQ+H GN
Sbjct: 247  QLLTAKEESELIGQVQDLMSLENVKEKFKLQFGRDPTLVEWADAVGLSYSVMQSQLHSGN 306

Query: 959  SSRERLIYANFRLVVHIAKQYQGRGLNLQDLMQEGSMGLMKSVEKFKPQVGCRFATYAYW 780
             SRE+LI AN R+VVHIAKQYQGRGL+LQDL+QEGSMGLMKS+EKFKPQVGCRFATYAYW
Sbjct: 307  RSREKLINANLRMVVHIAKQYQGRGLSLQDLLQEGSMGLMKSIEKFKPQVGCRFATYAYW 366

Query: 779  WIRQSIRKALFQHSRMIRLPENVYGLLSKVYEAKKLCIQQGNHQPTKEDIAAFAGMSVER 600
            WIRQ++RKA+FQHSR IRLPENVY  L KV EAK+  I +GNH PTKE++A   G++  R
Sbjct: 367  WIRQTVRKAIFQHSRTIRLPENVYHTLGKVSEAKRSYIMEGNHNPTKEELAKRIGITTVR 426

Query: 599  MEKLLYMARMPLSIQQSVWMDQDTTFQEITADPSIEAPEKGVEKQFMRQHIRNLLSVLNP 420
            +E+LLYMARMPLS+QQ+VW DQ+TTFQEITAD  +E PE  V KQ MR+H+ +LL++LNP
Sbjct: 427  LERLLYMARMPLSMQQTVWADQETTFQEITADIEVEIPELCVAKQLMRKHVLSLLNILNP 486

Query: 419  RERKIIRMRFGFGIEDGKQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLNSHGLAAYS 240
            RERKIIR+R  +GIEDGK+KSLSEIG+ FGLSKERVRQLESRALYKLKQCL SHGL AY+
Sbjct: 487  RERKIIRLR--YGIEDGKKKSLSEIGSVFGLSKERVRQLESRALYKLKQCLASHGLEAYA 544

Query: 239  DMLI 228
            D+L+
Sbjct: 545  DLLV 548


>ref|XP_002326192.1| predicted protein [Populus trichocarpa] gi|222833385|gb|EEE71862.1|
            predicted protein [Populus trichocarpa]
          Length = 535

 Score =  498 bits (1282), Expect = e-138
 Identities = 247/363 (68%), Positives = 295/363 (81%)
 Frame = -2

Query: 1319 RTVRSTRHLERQTKRRRGAEQKVEVQETNNNRKRESHRKSREGYDPNDPLRLFLWGPETT 1140
            + VRS RHL RQ+  RR  + K  + ET +++  +  ++  +G+DPNDPLRLFLWGPET 
Sbjct: 174  KIVRSRRHLARQSLNRRAPKTKDLIFETYDSKSADIQKRLSQGFDPNDPLRLFLWGPETK 233

Query: 1139 QLLTAKEEAELIMKIQDLMKLQEVKNRLHCQFSREPTLVEWAAVVGISCQSLKSQIHCGN 960
            QLLTAKEE ELI +IQDLM L+ VKNRL  QF REPTLVEWA  VG+SC  LK Q+H GN
Sbjct: 234  QLLTAKEEFELIAQIQDLMNLEGVKNRLESQFGREPTLVEWAQAVGLSCHVLKLQLHSGN 293

Query: 959  SSRERLIYANFRLVVHIAKQYQGRGLNLQDLMQEGSMGLMKSVEKFKPQVGCRFATYAYW 780
             SRE+LI AN R+VVHIAK+YQ RGL LQDL+QEG++GLMKS+EKFKPQ GCRFATYAYW
Sbjct: 294  RSREKLINANLRMVVHIAKRYQNRGLGLQDLLQEGTVGLMKSIEKFKPQAGCRFATYAYW 353

Query: 779  WIRQSIRKALFQHSRMIRLPENVYGLLSKVYEAKKLCIQQGNHQPTKEDIAAFAGMSVER 600
            WIRQ+I KA+FQHSR IRLPENVYGLL KV EAK+  IQ+GNHQPT E+IA   G+++++
Sbjct: 354  WIRQTITKAIFQHSRTIRLPENVYGLLGKVMEAKRSYIQEGNHQPTAEEIARRVGIAIDK 413

Query: 599  MEKLLYMARMPLSIQQSVWMDQDTTFQEITADPSIEAPEKGVEKQFMRQHIRNLLSVLNP 420
            +EKLL   R PLS+QQ+VW DQ+TTFQEITAD  IE P+  V KQ MR+HIR LL++L+ 
Sbjct: 414  LEKLLCFTRTPLSMQQTVWSDQNTTFQEITADTEIEIPDMSVAKQLMRKHIRGLLNILSL 473

Query: 419  RERKIIRMRFGFGIEDGKQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLNSHGLAAYS 240
            +ER+IIR+R  FGIEDGKQKSLSEIG  FGLSKERVRQLESRALYKLKQC+ SHGL AY+
Sbjct: 474  KERRIIRLR--FGIEDGKQKSLSEIGNVFGLSKERVRQLESRALYKLKQCVGSHGLDAYA 531

Query: 239  DML 231
            D+L
Sbjct: 532  DLL 534


>ref|XP_004143265.1| PREDICTED: RNA polymerase sigma factor sigF, chloroplastic-like
            [Cucumis sativus] gi|449482444|ref|XP_004156283.1|
            PREDICTED: RNA polymerase sigma factor sigF,
            chloroplastic-like [Cucumis sativus]
          Length = 562

 Score =  483 bits (1244), Expect = e-134
 Identities = 235/363 (64%), Positives = 298/363 (82%)
 Frame = -2

Query: 1319 RTVRSTRHLERQTKRRRGAEQKVEVQETNNNRKRESHRKSREGYDPNDPLRLFLWGPETT 1140
            RTVRSTR  +R++K+R+  +    + E +N R ++S RK+ E +DPNDPLRLFLWGPET 
Sbjct: 201  RTVRSTRLQDRRSKKRKVPKHVTTIDEISNFRGKDSRRKTSEKFDPNDPLRLFLWGPETK 260

Query: 1139 QLLTAKEEAELIMKIQDLMKLQEVKNRLHCQFSREPTLVEWAAVVGISCQSLKSQIHCGN 960
            +LLTA+EE+ELI++IQDLM L  VK RL  QF REPTLVEWA  +GI+CQ L+SQ+H   
Sbjct: 261  KLLTAQEESELIVQIQDLMILDNVKARLQSQFDREPTLVEWAEALGITCQHLQSQLHVFQ 320

Query: 959  SSRERLIYANFRLVVHIAKQYQGRGLNLQDLMQEGSMGLMKSVEKFKPQVGCRFATYAYW 780
            +SRE+LI AN R+VVHIAKQYQGRGL+L DL+Q GS+GLMKSVEKFKPQ GCRF +YAYW
Sbjct: 321  TSREKLINANLRMVVHIAKQYQGRGLSLHDLLQVGSLGLMKSVEKFKPQAGCRFGSYAYW 380

Query: 779  WIRQSIRKALFQHSRMIRLPENVYGLLSKVYEAKKLCIQQGNHQPTKEDIAAFAGMSVER 600
            WIR SI KA+FQHSR IRLPENVY LL KV EAK   ++ GN++P+KE++AA  G++VER
Sbjct: 381  WIRHSITKAIFQHSRTIRLPENVYALLGKVTEAKNYFVRAGNYKPSKEELAARVGITVER 440

Query: 599  MEKLLYMARMPLSIQQSVWMDQDTTFQEITADPSIEAPEKGVEKQFMRQHIRNLLSVLNP 420
             +KL++M+R+P S+QQ VW DQ+TTFQEITAD  ++ P+  VE++ MR+HIRNLLS+L+P
Sbjct: 441  FDKLMFMSRIPRSLQQPVWADQETTFQEITADSEVDTPDVSVERELMRRHIRNLLSILSP 500

Query: 419  RERKIIRMRFGFGIEDGKQKSLSEIGAGFGLSKERVRQLESRALYKLKQCLNSHGLAAYS 240
            +ER+IIR+R  FGIEDG++K+L EIG  FGLSKERVRQLE+RALYKLK+C NS GL AY+
Sbjct: 501  KERRIIRLR--FGIEDGREKTLLEIGNMFGLSKERVRQLENRALYKLKRCCNSQGLGAYA 558

Query: 239  DML 231
            D+L
Sbjct: 559  DLL 561