BLASTX nr result

ID: Scutellaria24_contig00002449 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002449
         (1058 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002514917.1| Small rubber particle protein, putative [Ric...   115   7e-44
ref|XP_002297837.1| predicted protein [Populus trichocarpa] gi|1...   113   5e-43
ref|XP_002304688.1| predicted protein [Populus trichocarpa] gi|2...   110   1e-42
ref|XP_002278036.1| PREDICTED: REF/SRPP-like protein At1g67360-l...   109   1e-42
ref|XP_002888592.1| rubber elongation factor family protein [Ara...   104   8e-39

>ref|XP_002514917.1| Small rubber particle protein, putative [Ricinus communis]
           gi|223545968|gb|EEF47471.1| Small rubber particle
           protein, putative [Ricinus communis]
          Length = 229

 Score =  115 bits (287), Expect(2) = 7e-44
 Identities = 54/130 (41%), Positives = 87/130 (66%)
 Frame = +2

Query: 398 KFDECAPPALKSLRLKAGLLVKNASQTVEELAEEARVGGPVAALCHAGTIAKHFAVTQTA 577
           KFD+ APP  K +  +A  L++ A Q V+EL  EARVGG  AA+  A   +KH A+TQ+ 
Sbjct: 86  KFDKHAPPVAKQVASQAQTLMQVALQKVQELVNEARVGGARAAVHFAAKESKHLALTQSV 145

Query: 578 VLWYKVSQHPSLHGASDAAVSKVGYWSKKFNEWVNELREKGYNVFQYVPLVPVEELGKAY 757
            +W K++Q P++H  +D AV    +WS+K+N  + ++ +KG+ +F Y+PLVPV+E+ KA+
Sbjct: 146 KVWIKLNQFPAVHTVADMAVPTAAHWSEKYNHVIKDMTQKGHTLFGYLPLVPVDEIAKAF 205

Query: 758 EEVEAAAHKK 787
           ++ +  A +K
Sbjct: 206 KQGKTKAGEK 215



 Score = 89.7 bits (221), Expect(2) = 7e-44
 Identities = 43/80 (53%), Positives = 56/80 (70%)
 Frame = +3

Query: 87  QVEVEGSEIRLKQLGFVRFITINAVVLVSTIYDQAKQNSGSLRPTVDKVENAVTAVLGPV 266
           + E + +   LK LGFVR + +  +V VS +YD AKQNSG LR TV  VE AVT V+GPV
Sbjct: 2   ETEKKMNSKELKHLGFVRMVAVQTLVCVSNLYDYAKQNSGPLRSTVGTVETAVTTVVGPV 61

Query: 267 FQTLKGVPTHLLIFLDDKVD 326
           +Q  K +P HLL+F+D+KVD
Sbjct: 62  YQKFKDLPDHLLVFVDNKVD 81


>ref|XP_002297837.1| predicted protein [Populus trichocarpa] gi|118481463|gb|ABK92674.1|
           unknown [Populus trichocarpa]
           gi|222845095|gb|EEE82642.1| predicted protein [Populus
           trichocarpa]
          Length = 229

 Score =  113 bits (283), Expect(2) = 5e-43
 Identities = 51/125 (40%), Positives = 84/125 (67%)
 Frame = +2

Query: 398 KFDECAPPALKSLRLKAGLLVKNASQTVEELAEEARVGGPVAALCHAGTIAKHFAVTQTA 577
           KFD+ APP  K +  +A  L++ AS+  + LA E + GGP AA+ +  T +KH  +T++ 
Sbjct: 87  KFDKRAPPVAKQVVSQARYLIEKASEKAKVLANEFQAGGPRAAVHYVSTESKHLFLTESV 146

Query: 578 VLWYKVSQHPSLHGASDAAVSKVGYWSKKFNEWVNELREKGYNVFQYVPLVPVEELGKAY 757
            +W K+ Q+PS+H  ++ AV    +WS+K+N +V E+ +KGY VF Y+P+VPV+E+  A+
Sbjct: 147 KVWVKLDQYPSVHKVAEVAVPTAAHWSEKYNHFVKEMSQKGYVVFGYLPVVPVDEISNAF 206

Query: 758 EEVEA 772
           ++ EA
Sbjct: 207 KQGEA 211



 Score = 88.6 bits (218), Expect(2) = 5e-43
 Identities = 46/82 (56%), Positives = 56/82 (68%), Gaps = 3/82 (3%)
 Frame = +3

Query: 90  VEVEGS---EIRLKQLGFVRFITINAVVLVSTIYDQAKQNSGSLRPTVDKVENAVTAVLG 260
           +EVE S   ++ LK LGFVR   I  +V VS +YD AK+NSG LR  V  VE  V AV+G
Sbjct: 1   MEVENSKRKDLDLKHLGFVRIAAIQVLVCVSNLYDYAKRNSGPLRSAVGTVEGTVNAVVG 60

Query: 261 PVFQTLKGVPTHLLIFLDDKVD 326
           PV++  KGVP HLL+FLD KVD
Sbjct: 61  PVYEKFKGVPDHLLVFLDHKVD 82


>ref|XP_002304688.1| predicted protein [Populus trichocarpa] gi|222842120|gb|EEE79667.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score =  110 bits (276), Expect(2) = 1e-42
 Identities = 51/125 (40%), Positives = 80/125 (64%)
 Frame = +2

Query: 398 KFDECAPPALKSLRLKAGLLVKNASQTVEELAEEARVGGPVAALCHAGTIAKHFAVTQTA 577
           KFD+ APP  K +  +A  L++ AS+  + LA E + GGP AAL +  T +KH  +T++ 
Sbjct: 86  KFDKHAPPVAKQVVSQAHYLIEKASEKAKVLANEFQAGGPRAALHYVATESKHLFLTESV 145

Query: 578 VLWYKVSQHPSLHGASDAAVSKVGYWSKKFNEWVNELREKGYNVFQYVPLVPVEELGKAY 757
            +W K+ Q   +H  +  AV    +WS K+N +V E+ +KGY VF Y+P+VP+EE+ KA+
Sbjct: 146 KVWVKLDQFSFVHKVAGVAVPAAAHWSDKYNHFVKEMNQKGYTVFGYLPVVPIEEISKAF 205

Query: 758 EEVEA 772
           ++ EA
Sbjct: 206 KQEEA 210



 Score = 90.1 bits (222), Expect(2) = 1e-42
 Identities = 45/80 (56%), Positives = 56/80 (70%)
 Frame = +3

Query: 87  QVEVEGSEIRLKQLGFVRFITINAVVLVSTIYDQAKQNSGSLRPTVDKVENAVTAVLGPV 266
           +VE    ++ LK LGFVR  TI  +V VS++YD AK+NSG LR  V  VE  V+AV+ PV
Sbjct: 2   EVESSKKDLELKHLGFVRIATIQILVSVSSLYDYAKRNSGPLRSPVGAVEGTVSAVVSPV 61

Query: 267 FQTLKGVPTHLLIFLDDKVD 326
           +  LKGVP HLL+FLD KVD
Sbjct: 62  YDKLKGVPDHLLVFLDHKVD 81


>ref|XP_002278036.1| PREDICTED: REF/SRPP-like protein At1g67360-like [Vitis vinifera]
          Length = 228

 Score =  109 bits (273), Expect(2) = 1e-42
 Identities = 53/125 (42%), Positives = 77/125 (61%)
 Frame = +2

Query: 398 KFDECAPPALKSLRLKAGLLVKNASQTVEELAEEARVGGPVAALCHAGTIAKHFAVTQTA 577
           KFD+ APP  K +  +A  LV  AS+T + L  EA+ GGP AAL HA T  K F +TQ  
Sbjct: 85  KFDKHAPPVAKEVVGQAQCLVLKASKTAQTLVSEAKAGGPSAALQHAATAYKLFMLTQLV 144

Query: 578 VLWYKVSQHPSLHGASDAAVSKVGYWSKKFNEWVNELREKGYNVFQYVPLVPVEELGKAY 757
            LW+ +++ P  H  +D AV    +WS K+N  V ++  KGY +F Y PLVP++++ K +
Sbjct: 145 KLWFILNKVPLFHTVADMAVPTAAHWSDKYNHVVTDMSVKGYTIFGYFPLVPIDKIAKTF 204

Query: 758 EEVEA 772
           ++ EA
Sbjct: 205 KQSEA 209



 Score = 91.3 bits (225), Expect(2) = 1e-42
 Identities = 50/87 (57%), Positives = 59/87 (67%)
 Frame = +3

Query: 75  MASSQVEVEGSEIRLKQLGFVRFITINAVVLVSTIYDQAKQNSGSLRPTVDKVENAVTAV 254
           MAS ++E       LK LGFVR   I A+V VS +Y  AKQNSG LR TV  VE+AVTAV
Sbjct: 1   MASCEMEKR----ELKHLGFVRIAAIQALVCVSNLYYYAKQNSGPLRSTVGAVEDAVTAV 56

Query: 255 LGPVFQTLKGVPTHLLIFLDDKVDVVS 335
           + PV+   KGVP HLL+F+D KVD VS
Sbjct: 57  ISPVYDKFKGVPDHLLVFMDKKVDEVS 83


>ref|XP_002888592.1| rubber elongation factor family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297334433|gb|EFH64851.1| rubber elongation
           factor family protein [Arabidopsis lyrata subsp. lyrata]
          Length = 246

 Score =  104 bits (260), Expect(2) = 8e-39
 Identities = 48/130 (36%), Positives = 82/130 (63%)
 Frame = +2

Query: 395 HKFDECAPPALKSLRLKAGLLVKNASQTVEELAEEARVGGPVAALCHAGTIAKHFAVTQT 574
           +KFDE APP  K +  +A +L+  A++  +   +EAR GGP AA  +A T  K+F VT +
Sbjct: 86  YKFDEHAPPMAKQVVNQAHVLIYKATEKAQNFVKEARTGGPKAAFSYAATEYKYFVVTNS 145

Query: 575 AVLWYKVSQHPSLHGASDAAVSKVGYWSKKFNEWVNELREKGYNVFQYVPLVPVEELGKA 754
             +W K++Q+  +H   D A+    + S ++N+ V ++ + GY++  Y+PLVPV+++ KA
Sbjct: 146 VKVWAKLNQYKPIHAVGDKALPVAAHLSSRYNDLVTDMTQMGYSLVGYLPLVPVDDIVKA 205

Query: 755 YEEVEAAAHK 784
           Y++ +AA  K
Sbjct: 206 YKKEDAARKK 215



 Score = 83.2 bits (204), Expect(2) = 8e-39
 Identities = 43/76 (56%), Positives = 51/76 (67%)
 Frame = +3

Query: 108 EIRLKQLGFVRFITINAVVLVSTIYDQAKQNSGSLRPTVDKVENAVTAVLGPVFQTLKGV 287
           E+ LK LGFVR   I  +  VS +YD AKQNSG L+  V+KVE AVT V+ PV+Q  K V
Sbjct: 10  EVGLKHLGFVRIAAIQILASVSNLYDYAKQNSGPLKSAVEKVEGAVTTVVTPVYQKFKDV 69

Query: 288 PTHLLIFLDDKVDVVS 335
           P  LL+FLD KV  VS
Sbjct: 70  PDSLLVFLDHKVGEVS 85


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