BLASTX nr result

ID: Scutellaria24_contig00002423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002423
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur...   426   e-117
ref|XP_002276466.1| PREDICTED: cytochrome b-c1 complex subunit R...   424   e-116
ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit R...   423   e-116
ref|XP_003518138.1| PREDICTED: cytochrome b-c1 complex subunit R...   417   e-114
gb|AFK37420.1| unknown [Lotus japonicus]                              417   e-114

>ref|XP_002512828.1| ubiquinol-cytochrome C reductase iron-sulfur subunit, putative
           [Ricinus communis] gi|223547839|gb|EEF49331.1|
           ubiquinol-cytochrome C reductase iron-sulfur subunit,
           putative [Ricinus communis]
          Length = 280

 Score =  426 bits (1096), Expect = e-117
 Identities = 211/281 (75%), Positives = 237/281 (84%), Gaps = 9/281 (3%)
 Frame = -2

Query: 976 MLRVAARKLSSSLL-----RPTNAAASYAVVPRYAIGGEDGGATSFAQSYPFDSH----P 824
           MLRVAAR+LSS        RP  AA S A+  R  I G D  ++   +S   + +    P
Sbjct: 1   MLRVAARRLSSLCSTQPSWRPNQAATS-AIASRNPINGGDSSSSDDVKSKVLNDYFAFRP 59

Query: 823 LFHFPSRGFSSDSITPKDESNFSLQVPPTVAAIKNPTPKIVYDEHNHERYPPGDPSKRAF 644
            FH P RGFSSDS+ PK+E     +VP TVAAIKNPTPKIVYDE+NHER+PPGDPSKRAF
Sbjct: 60  QFHIPHRGFSSDSLMPKNEDGIVSEVPATVAAIKNPTPKIVYDEYNHERFPPGDPSKRAF 119

Query: 643 AYFVLTGGRFVYASLLRLLVLKFILSMSASKDVLALASVEVDLSSIEPGTTVTVKWRGKP 464
           AYFVLTGGRFVYASL+RLL+LK +LSMSASKDVLALAS+EVDLSSIEPGTTVTVKWRGKP
Sbjct: 120 AYFVLTGGRFVYASLIRLLILKLVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKP 179

Query: 463 VFIRRRTDDDVKLANSVDLGSLRDPQQDSERVKDPEWLIVIGVCTHLGCIPLPNAGDFGG 284
           VFIRRRT+DD+KLANSV+L SLRDPQ D++RVK+PEWLIV+GVCTHLGCIPLPNAGDFGG
Sbjct: 180 VFIRRRTEDDIKLANSVELASLRDPQPDADRVKNPEWLIVVGVCTHLGCIPLPNAGDFGG 239

Query: 283 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 161
           WFCPCHGSHYDISGRIRKGPAPYNLEVPTY+FL+ENKL+IG
Sbjct: 240 WFCPCHGSHYDISGRIRKGPAPYNLEVPTYSFLDENKLLIG 280


>ref|XP_002276466.1| PREDICTED: cytochrome b-c1 complex subunit Rieske, mitochondrial
           [Vitis vinifera]
          Length = 274

 Score =  424 bits (1091), Expect = e-116
 Identities = 208/277 (75%), Positives = 234/277 (84%), Gaps = 5/277 (1%)
 Frame = -2

Query: 976 MLRVAARKLSS-----SLLRPTNAAASYAVVPRYAIGGEDGGATSFAQSYPFDSHPLFHF 812
           MLRVA+R+LSS     SL RP N  AS  V        E    T F+ S+ F S   FH 
Sbjct: 1   MLRVASRRLSSLTSSSSLWRP-NQVASAVVTSNPINPDEQPKPTRFSDSFSFASQ--FHL 57

Query: 811 PSRGFSSDSITPKDESNFSLQVPPTVAAIKNPTPKIVYDEHNHERYPPGDPSKRAFAYFV 632
           P RGF+S+S+TP++ES      PPTVAA+KNPTPKIVYDEHNHERYPPGDPSKRAFAYFV
Sbjct: 58  PFRGFASESLTPRNESGVIPDAPPTVAAVKNPTPKIVYDEHNHERYPPGDPSKRAFAYFV 117

Query: 631 LTGGRFVYASLLRLLVLKFILSMSASKDVLALASVEVDLSSIEPGTTVTVKWRGKPVFIR 452
           LTGGRFVYASL+RLL+LKF+LSMSASKDVLA+ASVEVDLS IE G TVT+KWRGKPVFIR
Sbjct: 118 LTGGRFVYASLIRLLILKFVLSMSASKDVLAMASVEVDLSGIESGNTVTIKWRGKPVFIR 177

Query: 451 RRTDDDVKLANSVDLGSLRDPQQDSERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 272
           RRT++D+K ANSVDL SLRDPQ+DSERVK+PEWLIV+GVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 178 RRTEEDIKSANSVDLASLRDPQEDSERVKNPEWLIVVGVCTHLGCIPLPNAGDFGGWFCP 237

Query: 271 CHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 161
           CHGSHYD+SGRIRKGPAPYNLEVPTY+FL+ENKL++G
Sbjct: 238 CHGSHYDVSGRIRKGPAPYNLEVPTYSFLDENKLLVG 274


>ref|XP_002271311.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2, mitochondrial
           [Vitis vinifera] gi|296085532|emb|CBI29264.3| unnamed
           protein product [Vitis vinifera]
          Length = 272

 Score =  423 bits (1087), Expect = e-116
 Identities = 208/274 (75%), Positives = 238/274 (86%), Gaps = 2/274 (0%)
 Frame = -2

Query: 976 MLRVAARKLSS-SLLRPTNAAASYAVVPR-YAIGGEDGGATSFAQSYPFDSHPLFHFPSR 803
           MLRVA R+LSS S   P++A AS A++ R ++  G DG + S +  + F+S   F    R
Sbjct: 1   MLRVAGRRLSSLSRWSPSSAPASSALLSRIHSSNGGDGSSRSISSPHLFNSE--FRDLIR 58

Query: 802 GFSSDSITPKDESNFSLQVPPTVAAIKNPTPKIVYDEHNHERYPPGDPSKRAFAYFVLTG 623
           GFSS+S+ P  +      +PPTVAA+KNPT KIVYD+HNHER+PPGDPSKRAFAYFVLTG
Sbjct: 59  GFSSESLAPSHDLGMISDLPPTVAALKNPTSKIVYDDHNHERFPPGDPSKRAFAYFVLTG 118

Query: 622 GRFVYASLLRLLVLKFILSMSASKDVLALASVEVDLSSIEPGTTVTVKWRGKPVFIRRRT 443
           GRF+YASL+RLLVLKF+LSMSASKDVLALAS+EVDLSSIEPG+TVTVKWRGKPVFIRRRT
Sbjct: 119 GRFIYASLIRLLVLKFVLSMSASKDVLALASIEVDLSSIEPGSTVTVKWRGKPVFIRRRT 178

Query: 442 DDDVKLANSVDLGSLRDPQQDSERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 263
           +DD+KLANSVD+GSLRDPQ+D+ RVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG
Sbjct: 179 EDDIKLANSVDVGSLRDPQEDAVRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCHG 238

Query: 262 SHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 161
           SHYD+SGRIRKGPAPYNLEVPTY+FLEENKLMIG
Sbjct: 239 SHYDVSGRIRKGPAPYNLEVPTYSFLEENKLMIG 272


>ref|XP_003518138.1| PREDICTED: cytochrome b-c1 complex subunit Rieske-2,
           mitochondrial-like [Glycine max]
          Length = 266

 Score =  417 bits (1073), Expect = e-114
 Identities = 209/277 (75%), Positives = 240/277 (86%), Gaps = 5/277 (1%)
 Frame = -2

Query: 976 MLRVAARKLSSSL-----LRPTNAAASYAVVPRYAIGGEDGGATSFAQSYPFDSHPLFHF 812
           MLRVAAR+LSSSL     LRP +AA+++  + R  +  +D       +S P  SHPL   
Sbjct: 1   MLRVAARRLSSSLSSSSPLRPNHAASAF--LSRNDVVVDD------RRSAP-SSHPLL-- 49

Query: 811 PSRGFSSDSITPKDESNFSLQVPPTVAAIKNPTPKIVYDEHNHERYPPGDPSKRAFAYFV 632
           P RG++++S+    E++ + ++PPTV A+KNPT KIVYD+HNHER+PPGDPSKRAFAYFV
Sbjct: 50  PFRGYATESLIHTKENSITPEIPPTVTAVKNPTSKIVYDDHNHERFPPGDPSKRAFAYFV 109

Query: 631 LTGGRFVYASLLRLLVLKFILSMSASKDVLALASVEVDLSSIEPGTTVTVKWRGKPVFIR 452
           LTGGRF YAS++RLLVLKF+LSMSASKDVLALAS+EVDLSSIEPGTTVTVKWRGKPVFIR
Sbjct: 110 LTGGRFAYASVVRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTTVTVKWRGKPVFIR 169

Query: 451 RRTDDDVKLANSVDLGSLRDPQQDSERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 272
           RRT+DD+KLANSVD+GSLRDPQ D++RVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP
Sbjct: 170 RRTEDDIKLANSVDVGSLRDPQPDADRVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCP 229

Query: 271 CHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 161
           CHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG
Sbjct: 230 CHGSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 266


>gb|AFK37420.1| unknown [Lotus japonicus]
          Length = 273

 Score =  417 bits (1071), Expect = e-114
 Identities = 209/275 (76%), Positives = 233/275 (84%), Gaps = 3/275 (1%)
 Frame = -2

Query: 976 MLRVAARKLSSSLLRP---TNAAASYAVVPRYAIGGEDGGATSFAQSYPFDSHPLFHFPS 806
           MLRVAA++LSSSL      TN AAS A + R  +       +    S PF   P F  P 
Sbjct: 1   MLRVAAKRLSSSLSSSPWRTNHAAS-AFLSRNPLA-PPSSTSDERGSDPFSLRPEFFLPF 58

Query: 805 RGFSSDSITPKDESNFSLQVPPTVAAIKNPTPKIVYDEHNHERYPPGDPSKRAFAYFVLT 626
           RGF+++S+    E++   ++P TVAA+KNP+ KIVYD+HNHER+PPGDPSKRAF YFVLT
Sbjct: 59  RGFATESLVHTKENSLIPEIPATVAAVKNPSSKIVYDDHNHERFPPGDPSKRAFTYFVLT 118

Query: 625 GGRFVYASLLRLLVLKFILSMSASKDVLALASVEVDLSSIEPGTTVTVKWRGKPVFIRRR 446
           GGRFVYASL+RLLVLKF+LSMSASKDVLALAS+EVDLSSIEPGT VTVKWRGKPVFIRRR
Sbjct: 119 GGRFVYASLIRLLVLKFVLSMSASKDVLALASLEVDLSSIEPGTIVTVKWRGKPVFIRRR 178

Query: 445 TDDDVKLANSVDLGSLRDPQQDSERVKDPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCH 266
           T+DD+KLANSVD+GSLRDPQQDSERVK+PEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCH
Sbjct: 179 TEDDIKLANSVDVGSLRDPQQDSERVKNPEWLIVIGVCTHLGCIPLPNAGDFGGWFCPCH 238

Query: 265 GSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 161
           GSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG
Sbjct: 239 GSHYDISGRIRKGPAPYNLEVPTYTFLEENKLMIG 273


Top