BLASTX nr result
ID: Scutellaria24_contig00002366
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00002366
(798 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002464505.1| hypothetical protein SORBIDRAFT_01g019770 [S... 283 3e-74
ref|XP_002301852.1| predicted protein [Populus trichocarpa] gi|2... 283 4e-74
gb|AAP80667.1|AF479048_1 ribosomal Pr 117, partial [Triticum aes... 283 4e-74
ref|NP_180895.1| 60S ribosomal protein L23 [Arabidopsis thaliana... 282 7e-74
gb|AAK25758.1|AF334838_1 ribosomal protein L17 [Castanea sativa]... 281 9e-74
>ref|XP_002464505.1| hypothetical protein SORBIDRAFT_01g019770 [Sorghum bicolor]
gi|242042297|ref|XP_002468543.1| hypothetical protein
SORBIDRAFT_01g047680 [Sorghum bicolor]
gi|242063474|ref|XP_002453026.1| hypothetical protein
SORBIDRAFT_04g036970 [Sorghum bicolor]
gi|241918359|gb|EER91503.1| hypothetical protein
SORBIDRAFT_01g019770 [Sorghum bicolor]
gi|241922397|gb|EER95541.1| hypothetical protein
SORBIDRAFT_01g047680 [Sorghum bicolor]
gi|241932857|gb|EES06002.1| hypothetical protein
SORBIDRAFT_04g036970 [Sorghum bicolor]
Length = 140
Score = 283 bits (724), Expect = 3e-74
Identities = 139/140 (99%), Positives = 140/140 (100%)
Frame = +2
Query: 53 MSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 232
MSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 233 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 412
VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGV+MYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVYMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 413 IGKECADLWPRIASAANAIV 472
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>ref|XP_002301852.1| predicted protein [Populus trichocarpa]
gi|224077606|ref|XP_002335793.1| predicted protein
[Populus trichocarpa] gi|224102227|ref|XP_002312599.1|
predicted protein [Populus trichocarpa]
gi|224110634|ref|XP_002315585.1| predicted protein
[Populus trichocarpa] gi|357137580|ref|XP_003570378.1|
PREDICTED: 60S ribosomal protein L23-like [Brachypodium
distachyon] gi|357146533|ref|XP_003574026.1| PREDICTED:
60S ribosomal protein L23-like [Brachypodium distachyon]
gi|315113254|pdb|3IZR|M Chain M, Localization Of The
Large Subunit Ribosomal Proteins Into A 5.5 A Cryo-Em
Map Of Triticum Aestivum Translating 80s Ribosome
gi|57471720|gb|AAW50991.1| ribosomal protein L17
[Triticum aestivum] gi|76573329|gb|ABA46769.1| ribosomal
protein L17-like protein [Solanum tuberosum]
gi|118481489|gb|ABK92687.1| unknown [Populus
trichocarpa] gi|118482141|gb|ABK93001.1| unknown
[Populus trichocarpa] gi|118483249|gb|ABK93527.1|
unknown [Populus trichocarpa]
gi|118483257|gb|ABK93531.1| unknown [Populus
trichocarpa] gi|118484402|gb|ABK94078.1| unknown
[Populus trichocarpa] gi|118487170|gb|ABK95413.1|
unknown [Populus trichocarpa]
gi|222834818|gb|EEE73267.1| predicted protein [Populus
trichocarpa] gi|222843578|gb|EEE81125.1| predicted
protein [Populus trichocarpa]
gi|222852419|gb|EEE89966.1| predicted protein [Populus
trichocarpa] gi|222864625|gb|EEF01756.1| predicted
protein [Populus trichocarpa]
gi|326507922|dbj|BAJ86704.1| predicted protein [Hordeum
vulgare subsp. vulgare]
Length = 140
Score = 283 bits (723), Expect = 4e-74
Identities = 139/140 (99%), Positives = 140/140 (100%)
Frame = +2
Query: 53 MSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 232
MSKRGRGG+AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 233 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 412
VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 413 IGKECADLWPRIASAANAIV 472
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>gb|AAP80667.1|AF479048_1 ribosomal Pr 117, partial [Triticum aestivum]
Length = 147
Score = 283 bits (723), Expect = 4e-74
Identities = 139/140 (99%), Positives = 140/140 (100%)
Frame = +2
Query: 53 MSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 232
MSKRGRGG+AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 8 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 67
Query: 233 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 412
VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 68 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 127
Query: 413 IGKECADLWPRIASAANAIV 472
IGKECADLWPRIASAANAIV
Sbjct: 128 IGKECADLWPRIASAANAIV 147
>ref|NP_180895.1| 60S ribosomal protein L23 [Arabidopsis thaliana]
gi|15229287|ref|NP_187090.1| 60S ribosomal protein L23
[Arabidopsis thaliana] gi|18390397|ref|NP_563707.1| 60S
ribosomal protein L23 [Arabidopsis thaliana]
gi|297826791|ref|XP_002881278.1| 60S ribosomal protein
L23 [Arabidopsis lyrata subsp. lyrata]
gi|297828934|ref|XP_002882349.1| 60S ribosomal protein
L23 [Arabidopsis lyrata subsp. lyrata]
gi|297843256|ref|XP_002889509.1| 60S ribosomal protein
L23 [Arabidopsis lyrata subsp. lyrata]
gi|19884121|sp|P49690.3|RL23_ARATH RecName: Full=60S
ribosomal protein L23; AltName: Full=Protein EMBRYO
DEFECTIVE 2171 gi|2459420|gb|AAB80655.1| 60S ribosomal
protein L23 [Arabidopsis thaliana]
gi|7547099|gb|AAF63771.1| ribosomal protein L17,
putative [Arabidopsis thaliana]
gi|14596111|gb|AAK68783.1| 60S ribosomal protein L17
[Arabidopsis thaliana] gi|15450856|gb|AAK96699.1| Strong
similarity to 60S ribosomal protein L17 [Arabidopsis
thaliana] gi|18377460|gb|AAL66896.1| unknown protein
[Arabidopsis thaliana] gi|20148697|gb|AAM10239.1|
similar to 60S ribosomal protein L17 [Arabidopsis
thaliana] gi|21555625|gb|AAM63901.1| putative 60S
ribosomal protein L17 [Arabidopsis thaliana]
gi|21593801|gb|AAM65768.1| putative 60S ribosomal
protein L17 [Arabidopsis thaliana]
gi|98961079|gb|ABF59023.1| At2g33370 [Arabidopsis
thaliana] gi|297327117|gb|EFH57537.1| 60S ribosomal
protein L23 [Arabidopsis lyrata subsp. lyrata]
gi|297328189|gb|EFH58608.1| 60S ribosomal protein L23
[Arabidopsis lyrata subsp. lyrata]
gi|297335351|gb|EFH65768.1| 60S ribosomal protein L23
[Arabidopsis lyrata subsp. lyrata]
gi|330253730|gb|AEC08824.1| 60S ribosomal protein L23
[Arabidopsis thaliana] gi|332189581|gb|AEE27702.1| 60S
ribosomal protein L23 [Arabidopsis thaliana]
gi|332640555|gb|AEE74076.1| 60S ribosomal protein L23
[Arabidopsis thaliana]
Length = 140
Score = 282 bits (721), Expect = 7e-74
Identities = 138/140 (98%), Positives = 140/140 (100%)
Frame = +2
Query: 53 MSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 232
MSKRGRGGT+GNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGTSGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 233 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 412
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 413 IGKECADLWPRIASAANAIV 472
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140
>gb|AAK25758.1|AF334838_1 ribosomal protein L17 [Castanea sativa] gi|388492470|gb|AFK34301.1|
unknown [Lotus japonicus]
Length = 140
Score = 281 bits (720), Expect = 9e-74
Identities = 138/140 (98%), Positives = 140/140 (100%)
Frame = +2
Query: 53 MSKRGRGGTAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 232
MSKRGRGG+AGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM
Sbjct: 1 MSKRGRGGSAGNKFRMSLGLPVAATVNCADNTGAKNLYIISVKGIKGRLNRLPSACVGDM 60
Query: 233 VMATVKKGKPDLRKKVMPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 412
VMATVKKGKPDLRKKV+PAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP
Sbjct: 61 VMATVKKGKPDLRKKVLPAVIVRQRKPWRRKDGVFMYFEDNAGVIVNPKGEMKGSAITGP 120
Query: 413 IGKECADLWPRIASAANAIV 472
IGKECADLWPRIASAANAIV
Sbjct: 121 IGKECADLWPRIASAANAIV 140