BLASTX nr result

ID: Scutellaria24_contig00002306 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002306
         (838 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ86200.1| predicted protein [Hordeum vulgare subsp. vulgare]    302   5e-80
gb|AGE46027.1| 60S ribosomal protein L21 [Elaeis guineensis]          300   2e-79
ref|XP_002531173.1| 60S ribosomal protein L21, putative [Ricinus...   300   3e-79
pdb|3IZR|U Chain U, Localization Of The Large Subunit Ribosomal ...   300   3e-79
gb|AEA48982.1| 60S ribosomal protein L21 [Triticum aestivum]          298   1e-78

>dbj|BAJ86200.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 191

 Score =  302 bits (774), Expect = 5e-80
 Identities = 142/168 (84%), Positives = 156/168 (92%)
 Frame = +3

Query: 36  RNCKMPAGHGLRSRTRDSFSRPFRKKGPTHLTTYLRIFKIGEYVDVKVNGSIHKGMPHKF 215
           R  KMPAGHGLRSRTRD F+RPFRKKG   LTTYLR +K+GE+VDVKVNG++HKGMPHKF
Sbjct: 24  RKGKMPAGHGLRSRTRDLFARPFRKKGYIALTTYLRTYKVGEHVDVKVNGAVHKGMPHKF 83

Query: 216 YHGRTGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHVQPSRCHEEFLQRVKKNDQLK 395
           YHGRTGRVWNVTKRA+GVE+NKQVGNRIIKKRIHVRVEHVQPSRC+EEFLQR   ND+LK
Sbjct: 84  YHGRTGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLK 143

Query: 396 AEAKAQGKIISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 539
           AEAKA+G++ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY
Sbjct: 144 AEAKARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 191


>gb|AGE46027.1| 60S ribosomal protein L21 [Elaeis guineensis]
          Length = 164

 Score =  300 bits (769), Expect = 2e-79
 Identities = 142/164 (86%), Positives = 153/164 (93%)
 Frame = +3

Query: 48  MPAGHGLRSRTRDSFSRPFRKKGPTHLTTYLRIFKIGEYVDVKVNGSIHKGMPHKFYHGR 227
           MPAGHG+RSRTRD FSRPFRK G   LTTYLR +KIG+YVDVKVNG++HKGMPHKFYHGR
Sbjct: 1   MPAGHGVRSRTRDLFSRPFRKHGYIPLTTYLRTYKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 228 TGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHVQPSRCHEEFLQRVKKNDQLKAEAK 407
           TGRVWNVTKRA+GVE+NKQVGNRIIKKRIHVRVEHV PSRC E+F  R++KNDQLKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVLPSRCQEDFRLRIRKNDQLKAEAK 120

Query: 408 AQGKIISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 539
           A+G IISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGDIISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164


>ref|XP_002531173.1| 60S ribosomal protein L21, putative [Ricinus communis]
           gi|223529243|gb|EEF31216.1| 60S ribosomal protein L21,
           putative [Ricinus communis]
          Length = 164

 Score =  300 bits (768), Expect = 3e-79
 Identities = 144/164 (87%), Positives = 153/164 (93%)
 Frame = +3

Query: 48  MPAGHGLRSRTRDSFSRPFRKKGPTHLTTYLRIFKIGEYVDVKVNGSIHKGMPHKFYHGR 227
           MPAGHGLRSRTRD F+RPFRKKG   LTTYLR FKIG+YVDVKVNG++HKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTFKIGDYVDVKVNGAVHKGMPHKFYHGR 60

Query: 228 TGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHVQPSRCHEEFLQRVKKNDQLKAEAK 407
           TGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEH+Q SRC EEF  R KKND+LKAEAK
Sbjct: 61  TGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHLQVSRCTEEFRLRKKKNDELKAEAK 120

Query: 408 AQGKIISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 539
            +G++ISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY
Sbjct: 121 GRGEVISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 164


>pdb|3IZR|U Chain U, Localization Of The Large Subunit Ribosomal Proteins Into
           A 5.5 A Cryo-Em Map Of Triticum Aestivum Translating 80s
           Ribosome
          Length = 164

 Score =  300 bits (767), Expect = 3e-79
 Identities = 140/164 (85%), Positives = 154/164 (93%)
 Frame = +3

Query: 48  MPAGHGLRSRTRDSFSRPFRKKGPTHLTTYLRIFKIGEYVDVKVNGSIHKGMPHKFYHGR 227
           MPAGHGLRSRTRD F+RPFRKKG   LTTYLR +K+GE+VDVKVNG++HKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 60

Query: 228 TGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHVQPSRCHEEFLQRVKKNDQLKAEAK 407
           TGRVWNVTKRA+GVE+NKQVGNRIIKKRIHVRVEHVQPSRC+EEFLQR   ND+LKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 120

Query: 408 AQGKIISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 539
           A+G++ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY
Sbjct: 121 ARGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 164


>gb|AEA48982.1| 60S ribosomal protein L21 [Triticum aestivum]
          Length = 164

 Score =  298 bits (763), Expect = 1e-78
 Identities = 139/164 (84%), Positives = 153/164 (93%)
 Frame = +3

Query: 48  MPAGHGLRSRTRDSFSRPFRKKGPTHLTTYLRIFKIGEYVDVKVNGSIHKGMPHKFYHGR 227
           MPAGHGLRSRTRD F+RPFRKKG   LTTYLR +K+GE+VDVKVNG++HKGMPHKFYHGR
Sbjct: 1   MPAGHGLRSRTRDLFARPFRKKGYIPLTTYLRTYKVGEHVDVKVNGAVHKGMPHKFYHGR 60

Query: 228 TGRVWNVTKRAVGVEVNKQVGNRIIKKRIHVRVEHVQPSRCHEEFLQRVKKNDQLKAEAK 407
           TGRVWNVTKRA+GVE+NKQVGNRIIKKRIHVRVEHVQPSRC+EEFLQR   ND+LKAEAK
Sbjct: 61  TGRVWNVTKRAIGVEINKQVGNRIIKKRIHVRVEHVQPSRCNEEFLQRKLNNDKLKAEAK 120

Query: 408 AQGKIISTKRQPEGPKPGFMVEGATLETVTPIPYDVVNDLKGGY 539
            +G++ISTKRQP GPKPGFMVEG T+ETVTPIPYDVVNDLKGGY
Sbjct: 121 VRGEVISTKRQPAGPKPGFMVEGTTIETVTPIPYDVVNDLKGGY 164


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