BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002280
         (1426 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271463.2| PREDICTED: splicing factor U2af large subuni...   585   e-168
emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]   585   e-168
emb|CBI17547.3| unnamed protein product [Vitis vinifera]              585   e-168
sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large...   578   e-166
gb|ABU45209.1| unknown [Solanum bulbocastanum]                        579   e-166

>ref|XP_002271463.2| PREDICTED: splicing factor U2af large subunit B-like [Vitis vinifera]
          Length = 568

 Score =  585 bits (1509), Expect(2) = e-168
 Identities = 299/344 (86%), Positives = 307/344 (89%)
 Frame = -3

Query: 1424 GQLPGTAPTIPGMFPNMLPLAGAQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQS 1245
            GQ+PGT PTIPGMFPNM PLA  QFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 190  GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 249

Query: 1244 VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 1065
            VATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 250  VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 309

Query: 1064 VKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQ 885
            VKVRRPSDYNPSLAATLGPSQPNPNLNL AVGLTPGS+GGLEGPDRIFVGGLPYYFTE+Q
Sbjct: 310  VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 369

Query: 884  IRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 705
            IRELLESFG LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR
Sbjct: 370  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 429

Query: 704  ANQGTTQPKPEQESVLLHAQQQIALQRLMLAPGLTPTAPATKVVCLTQVVNPXXXXXXXX 525
            ANQG +QPKPEQE+VLLHAQQQIALQRLM  PG    A ATKVVCLTQVVN         
Sbjct: 430  ANQGASQPKPEQENVLLHAQQQIALQRLMFQPG----ALATKVVCLTQVVNADELQDDEA 485

Query: 524  XXXXXXDMRAECGKFGSLVNVVIPRPLPNGEMGPGVGKVFLEYA 393
                  DMR E GKFG+LVNV IPRP PNGE  PG+GKVFLEYA
Sbjct: 486  YEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYA 529



 Score = 35.0 bits (79), Expect(2) = e-168
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -2

Query: 276 VFYPENKFSEGDYDG 232
           VFYPENKFS+G+YDG
Sbjct: 554 VFYPENKFSQGEYDG 568


>emb|CAN68321.1| hypothetical protein VITISV_032193 [Vitis vinifera]
          Length = 565

 Score =  585 bits (1509), Expect(2) = e-168
 Identities = 299/344 (86%), Positives = 307/344 (89%)
 Frame = -3

Query: 1424 GQLPGTAPTIPGMFPNMLPLAGAQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQS 1245
            GQ+PGT PTIPGMFPNM PLA  QFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 187  GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 246

Query: 1244 VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 1065
            VATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 247  VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 306

Query: 1064 VKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQ 885
            VKVRRPSDYNPSLAATLGPSQPNPNLNL AVGLTPGS+GGLEGPDRIFVGGLPYYFTE+Q
Sbjct: 307  VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 366

Query: 884  IRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 705
            IRELLESFG LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR
Sbjct: 367  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 426

Query: 704  ANQGTTQPKPEQESVLLHAQQQIALQRLMLAPGLTPTAPATKVVCLTQVVNPXXXXXXXX 525
            ANQG +QPKPEQE+VLLHAQQQIALQRLM  PG    A ATKVVCLTQVVN         
Sbjct: 427  ANQGASQPKPEQENVLLHAQQQIALQRLMFQPG----ALATKVVCLTQVVNADELQDDEA 482

Query: 524  XXXXXXDMRAECGKFGSLVNVVIPRPLPNGEMGPGVGKVFLEYA 393
                  DMR E GKFG+LVNV IPRP PNGE  PG+GKVFLEYA
Sbjct: 483  YEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYA 526



 Score = 35.0 bits (79), Expect(2) = e-168
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -2

Query: 276 VFYPENKFSEGDYDG 232
           VFYPENKFS+G+YDG
Sbjct: 551 VFYPENKFSQGEYDG 565


>emb|CBI17547.3| unnamed protein product [Vitis vinifera]
          Length = 393

 Score =  585 bits (1509), Expect(2) = e-168
 Identities = 299/344 (86%), Positives = 307/344 (89%)
 Frame = -3

Query: 1424 GQLPGTAPTIPGMFPNMLPLAGAQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQS 1245
            GQ+PGT PTIPGMFPNM PLA  QFGALP+MPVQAMTQQATRHARRVYVGGL PTANEQS
Sbjct: 15   GQIPGTTPTIPGMFPNMFPLASGQFGALPVMPVQAMTQQATRHARRVYVGGLSPTANEQS 74

Query: 1244 VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 1065
            VATFFS VMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 75   VATFFSQVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 134

Query: 1064 VKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQ 885
            VKVRRPSDYNPSLAATLGPSQPNPNLNL AVGLTPGS+GGLEGPDRIFVGGLPYYFTE+Q
Sbjct: 135  VKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLTPGSAGGLEGPDRIFVGGLPYYFTEAQ 194

Query: 884  IRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 705
            IRELLESFG LRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR
Sbjct: 195  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 254

Query: 704  ANQGTTQPKPEQESVLLHAQQQIALQRLMLAPGLTPTAPATKVVCLTQVVNPXXXXXXXX 525
            ANQG +QPKPEQE+VLLHAQQQIALQRLM  PG    A ATKVVCLTQVVN         
Sbjct: 255  ANQGASQPKPEQENVLLHAQQQIALQRLMFQPG----ALATKVVCLTQVVNADELQDDEA 310

Query: 524  XXXXXXDMRAECGKFGSLVNVVIPRPLPNGEMGPGVGKVFLEYA 393
                  DMR E GKFG+LVNV IPRP PNGE  PG+GKVFLEYA
Sbjct: 311  YEDIVEDMRIEGGKFGNLVNVAIPRPKPNGEPTPGLGKVFLEYA 354



 Score = 35.0 bits (79), Expect(2) = e-168
 Identities = 13/15 (86%), Positives = 15/15 (100%)
 Frame = -2

Query: 276 VFYPENKFSEGDYDG 232
           VFYPENKFS+G+YDG
Sbjct: 379 VFYPENKFSQGEYDG 393


>sp|Q9ZR40.1|U2A2B_NICPL RecName: Full=Splicing factor U2af large subunit B; AltName:
            Full=NpU2AF65b; AltName: Full=U2 auxiliary factor 65 kDa
            subunit B; AltName: Full=U2 small nuclear
            ribonucleoprotein auxiliary factor large subunit B;
            Short=U2 snRNP auxiliary factor large subunit B
            gi|3850821|emb|CAA77135.1| U2 snRNP auxiliary factor,
            large subunit [Nicotiana plumbaginifolia]
          Length = 573

 Score =  578 bits (1490), Expect(2) = e-166
 Identities = 294/344 (85%), Positives = 306/344 (88%)
 Frame = -3

Query: 1424 GQLPGTAPTIPGMFPNMLPLAGAQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQS 1245
            GQ+PGT P IPGMFPNM PLA  QFGALP+MP+QAMTQQATRHARRVYVGGLP  ANEQS
Sbjct: 195  GQVPGTNPPIPGMFPNMFPLASGQFGALPVMPIQAMTQQATRHARRVYVGGLPAHANEQS 254

Query: 1244 VATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGAP 1065
            VATFFSHVMSAIGGNTAGPGDAVVNVYIN+EKKFAFVEMRSVEEASNAMALDGIIFEGAP
Sbjct: 255  VATFFSHVMSAIGGNTAGPGDAVVNVYINYEKKFAFVEMRSVEEASNAMALDGIIFEGAP 314

Query: 1064 VKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSSGGLEGPDRIFVGGLPYYFTESQ 885
             KVRRPSDYNPSLAATLGPSQPNPNLNL AVGL+PGS+GGLEGPDRIFVGGLPYYFTE+Q
Sbjct: 315  CKVRRPSDYNPSLAATLGPSQPNPNLNLAAVGLSPGSAGGLEGPDRIFVGGLPYYFTEAQ 374

Query: 884  IRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVRR 705
            IRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVRR
Sbjct: 375  IRELLESFGPLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVRR 434

Query: 704  ANQGTTQPKPEQESVLLHAQQQIALQRLMLAPGLTPTAPATKVVCLTQVVNPXXXXXXXX 525
            ANQGTTQPKPEQESVLLHAQQQIALQRLML P       ATKV+ LT+V++         
Sbjct: 435  ANQGTTQPKPEQESVLLHAQQQIALQRLMLQPATL----ATKVLSLTEVISADELNDDED 490

Query: 524  XXXXXXDMRAECGKFGSLVNVVIPRPLPNGEMGPGVGKVFLEYA 393
                  DMR ECGKFGSLVNVVIPRP PNGE  PGVGKVFLEYA
Sbjct: 491  YQDILEDMRTECGKFGSLVNVVIPRPSPNGEPTPGVGKVFLEYA 534



 Score = 35.4 bits (80), Expect(2) = e-166
 Identities = 14/15 (93%), Positives = 14/15 (93%)
 Frame = -2

Query: 276 VFYPENKFSEGDYDG 232
           VFYPENKF EGDYDG
Sbjct: 559 VFYPENKFYEGDYDG 573


>gb|ABU45209.1| unknown [Solanum bulbocastanum]
          Length = 558

 Score =  579 bits (1493), Expect(2) = e-166
 Identities = 295/345 (85%), Positives = 308/345 (89%), Gaps = 1/345 (0%)
 Frame = -3

Query: 1424 GQLPGTA-PTIPGMFPNMLPLAGAQFGALPMMPVQAMTQQATRHARRVYVGGLPPTANEQ 1248
            GQ+PGT  P+IPGMF NM PLA  QFGALP+MPVQAMTQQATRHARRVYVGGLPPTANEQ
Sbjct: 179  GQVPGTTNPSIPGMFSNMFPLAAGQFGALPIMPVQAMTQQATRHARRVYVGGLPPTANEQ 238

Query: 1247 SVATFFSHVMSAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGIIFEGA 1068
            SVATFFSHVM AIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDG++FEG 
Sbjct: 239  SVATFFSHVMYAIGGNTAGPGDAVVNVYINHEKKFAFVEMRSVEEASNAMALDGVVFEGG 298

Query: 1067 PVKVRRPSDYNPSLAATLGPSQPNPNLNLGAVGLTPGSSGGLEGPDRIFVGGLPYYFTES 888
            PVKVRRPSDYNPSLAATLGPSQP+PNLNL AVGLTPGSSGGLEGPDRIFVGGLPYYFTES
Sbjct: 299  PVKVRRPSDYNPSLAATLGPSQPSPNLNLAAVGLTPGSSGGLEGPDRIFVGGLPYYFTES 358

Query: 887  QIRELLESFGALRGFDLVKDRETGNSKGYAFCVYQDLSVTDIACAALNGIKMGDKTLTVR 708
            QIRELLESFG LRGFDLVKDRETGNSKGYAFCVYQD+SVTDIACAALNGIKMGDKTLTVR
Sbjct: 359  QIRELLESFGQLRGFDLVKDRETGNSKGYAFCVYQDVSVTDIACAALNGIKMGDKTLTVR 418

Query: 707  RANQGTTQPKPEQESVLLHAQQQIALQRLMLAPGLTPTAPATKVVCLTQVVNPXXXXXXX 528
            RANQGTTQP PEQESVLLHAQQQIALQR ML PG    A ATKV+CLT+VV+        
Sbjct: 419  RANQGTTQPNPEQESVLLHAQQQIALQRFMLQPG----ALATKVLCLTEVVSVDELKDDD 474

Query: 527  XXXXXXXDMRAECGKFGSLVNVVIPRPLPNGEMGPGVGKVFLEYA 393
                   DMR ECGKFG+L+NVVIPRP PNGE  PG+GKVFLEYA
Sbjct: 475  DYQDILEDMRIECGKFGALLNVVIPRPNPNGEPTPGLGKVFLEYA 519



 Score = 33.9 bits (76), Expect(2) = e-166
 Identities = 13/14 (92%), Positives = 14/14 (100%)
 Frame = -2

Query: 276 VFYPENKFSEGDYD 235
           VFYPENKFSEGDY+
Sbjct: 544 VFYPENKFSEGDYE 557