BLASTX nr result
ID: Scutellaria24_contig00002172
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria24_contig00002172
(2014 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [... 570 e-160
emb|CBI26421.3| unnamed protein product [Vitis vinifera] 565 e-158
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik... 563 e-158
dbj|BAA88921.1| sigma factor [Nicotiana tabacum] 562 e-157
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor rpoD-... 561 e-157
>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 508
Score = 570 bits (1470), Expect = e-160
Identities = 320/509 (62%), Positives = 367/509 (72%), Gaps = 25/509 (4%)
Frame = +1
Query: 271 MATAAVFGLSAAKRLLLGSTFYYXXXXXXXXXXXXPLPPXXXXXXXXXXXXXXXXXXY-- 444
MATAAV GLSA KRLL STFYY Y
Sbjct: 1 MATAAVIGLSAGKRLL-SSTFYYSDLTEKLSSANEHGLTHYQITSTKTLIVAKKSSNYGP 59
Query: 445 -----NRRPQSIKALKQHVDTSNPLEPWV--------IHEEDSGEVYLVDAVLLLQKSML 585
NR QSIKALK+HVDT++ + EE S Y V+A+LLLQKSML
Sbjct: 60 SFPSSNRNTQSIKALKEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVEALLLLQKSML 119
Query: 586 EKQWKLSVIPKXXXXXXXXASK----VTSSGTSARRRRLDCKRRSMTMN------NRSKQ 735
EKQW LS S+ VT SG SAR+RR++ +R++++ + N KQ
Sbjct: 120 EKQWNLSFERTDSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQ 179
Query: 736 WKSVISPQLLHNSLKGYVKGVVSEQLLTHSQVVLLSQKIKAGXXXXXXXXXXXXXXGCEP 915
KS +SP+LL N LKGYVKGVVSE+LL+H++VV LS+ IKAG GC+P
Sbjct: 180 LKSAVSPELLQNRLKGYVKGVVSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDP 239
Query: 916 SDDQLAASLRITRPALQSKMIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 1095
SD+Q+A SL+I+R LQSK I CSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD
Sbjct: 240 SDEQVATSLKISRAELQSKSIACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGL 299
Query: 1096 XXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLSLIRNAKAR 1275
EKFDSSKGF+ISTYVYWWIRQGVSRALVE+SRTLRLP HLHERL LIRNAK R
Sbjct: 300 IGLLRGIEKFDSSKGFRISTYVYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIR 359
Query: 1276 LEERGITPSIDRIAESLNMSQRKVRNATEAVSKVFSLDREAFPSLNGLPGETLHSYIADN 1455
LEE+G+TPSIDRIAESLN+SQ+KVRNATEAVSKVFSLDREAFPSLNGLPGET HSYIADN
Sbjct: 360 LEEKGVTPSIDRIAESLNISQKKVRNATEAVSKVFSLDREAFPSLNGLPGETHHSYIADN 419
Query: 1456 RVENNPWNGVDEWALKDEVDKLINATLRERERDIIRLYYGLDNECLTWEDISRRIGLSRE 1635
+ENNPW+GVD+WALKDEV+KLIN TL+ERE++IIRLYYGLDNE LTWEDIS+RIGLSRE
Sbjct: 420 CLENNPWHGVDDWALKDEVNKLINLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRE 479
Query: 1636 RVRQVGLVALEKLKHAAKKRRLDAMLVQH 1722
RVRQVGLVALEKLKHAA+K++L+AMLV+H
Sbjct: 480 RVRQVGLVALEKLKHAARKKKLEAMLVKH 508
>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
Length = 555
Score = 565 bits (1456), Expect = e-158
Identities = 320/498 (64%), Positives = 364/498 (73%), Gaps = 11/498 (2%)
Frame = +1
Query: 262 SMIMATAAVFGLSAAKRLLLGSTFY------YXXXXXXXXXXXXPLPPXXXXXXXXXXXX 423
S +M TAAV GLSA RLL S Y P PP
Sbjct: 70 SHMMGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSN 129
Query: 424 XXXXXXYNRRPQSIKALKQHVDTSNP---LEPWVIHE--EDSGEVYLVDAVLLLQKSMLE 588
NR QS+KALK+HV++++ +P + E E YLV+A LLLQKSMLE
Sbjct: 130 YTPSS--NRSIQSMKALKEHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLE 187
Query: 589 KQWKLSVIPKXXXXXXXXASKVTSSGTSARRRRLDCKRRSMTMNNRSKQWKSVISPQLLH 768
KQW LS + +VT SGTSAR+RR+ ++R M ++S+ V + +
Sbjct: 188 KQWNLSFKARQKRR------EVTCSGTSARQRRISGRKRVMNEKSKSR----VRAALGVE 237
Query: 769 NSLKGYVKGVVSEQLLTHSQVVLLSQKIKAGXXXXXXXXXXXXXXGCEPSDDQLAASLRI 948
N LKGYVKGVVSE+LLTH+QVVLLS KIKAG G EP+D+Q+AASLR+
Sbjct: 238 NRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRM 297
Query: 949 TRPALQSKMIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXXXXXXXXEKFD 1128
+R LQSK+IECSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD EKFD
Sbjct: 298 SRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFD 357
Query: 1129 SSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLSLIRNAKARLEERGITPSID 1308
SSKGFKISTYVYWWIRQGVSRALVE+SRTLRLP+HLHERLSLIRNAK RLEE+GITPSID
Sbjct: 358 SSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSID 417
Query: 1309 RIAESLNMSQRKVRNATEAVSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNPWNGVD 1488
RIAE LNMSQ+KVRNATEA+SKVFSLDREAFPSLNGLPGETLHSYIAD R+ENNPW+GVD
Sbjct: 418 RIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNPWHGVD 477
Query: 1489 EWALKDEVDKLINATLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQVGLVALE 1668
EWALKDEV+KLIN TL ERERDIIRLYYGLDNECLTWEDIS+RIGLSRERVRQVGLVALE
Sbjct: 478 EWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALE 537
Query: 1669 KLKHAAKKRRLDAMLVQH 1722
KLK+AA+K R++AMLV++
Sbjct: 538 KLKNAARKGRMEAMLVKY 555
>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
vinifera]
Length = 497
Score = 563 bits (1452), Expect = e-158
Identities = 320/503 (63%), Positives = 363/503 (72%), Gaps = 18/503 (3%)
Frame = +1
Query: 268 IMATAAVFGLSAAKRLLLGSTFY------YXXXXXXXXXXXXPLPPXXXXXXXXXXXXXX 429
+M TAAV GLSA RLL S Y P PP
Sbjct: 1 MMGTAAVIGLSAGNRLLASSHHYSDVAEKLSSYVNDVGFPHHPSPPPKNLISAKKPSNYT 60
Query: 430 XXXXYNRRPQSIKALKQHVDTSNP---LEPWVIHE--EDSGEVYLVDAVLLLQKSMLEKQ 594
NR QS+KALK+HV++++ +P + E E YLV+A LLLQKSMLEKQ
Sbjct: 61 PSS--NRSIQSMKALKEHVESASAPSTADPDLSSSSSEVEDEEYLVEAFLLLQKSMLEKQ 118
Query: 595 WKLSVIPKXXXXXXXXASK-------VTSSGTSARRRRLDCKRRSMTMNNRSKQWKSVIS 753
W LS + K VT SGTSAR+RR+ ++R M ++S+ V +
Sbjct: 119 WNLSFEEEEEEEEEDMGKKARQKRREVTCSGTSARQRRISGRKRVMNEKSKSR----VRA 174
Query: 754 PQLLHNSLKGYVKGVVSEQLLTHSQVVLLSQKIKAGXXXXXXXXXXXXXXGCEPSDDQLA 933
+ N LKGYVKGVVSE+LLTH+QVVLLS KIKAG G EP+D+Q+A
Sbjct: 175 ALGVENRLKGYVKGVVSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVA 234
Query: 934 ASLRITRPALQSKMIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXXXXXXX 1113
ASLR++R LQSK+IECSLAREKLAMSNVRLVMSIAQRYDNMGAEMAD
Sbjct: 235 ASLRMSRAELQSKLIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRG 294
Query: 1114 XEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLSLIRNAKARLEERGI 1293
EKFDSSKGFKISTYVYWWIRQGVSRALVE+SRTLRLP+HLHERLSLIRNAK RLEE+GI
Sbjct: 295 IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGI 354
Query: 1294 TPSIDRIAESLNMSQRKVRNATEAVSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNP 1473
TPSIDRIAE LNMSQ+KVRNATEA+SKVFSLDREAFPSLNGLPGETLHSYIAD R+ENNP
Sbjct: 355 TPSIDRIAECLNMSQKKVRNATEAISKVFSLDREAFPSLNGLPGETLHSYIADVRLENNP 414
Query: 1474 WNGVDEWALKDEVDKLINATLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQVG 1653
W+GVDEWALKDEV+KLIN TL ERERDIIRLYYGLDNECLTWEDIS+RIGLSRERVRQVG
Sbjct: 415 WHGVDEWALKDEVNKLINTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVG 474
Query: 1654 LVALEKLKHAAKKRRLDAMLVQH 1722
LVALEKLK+AA+K R++AMLV++
Sbjct: 475 LVALEKLKNAARKGRMEAMLVKY 497
>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
Length = 508
Score = 562 bits (1448), Expect = e-157
Identities = 311/508 (61%), Positives = 367/508 (72%), Gaps = 24/508 (4%)
Frame = +1
Query: 268 IMATAAVFGLSAAKRLLLGSTFYYXXXXXXXXXXXXPLPPXXXXXXXXXXXXXXXXXXYN 447
+M+TAAV GLSA KRLL S+FYY P Y+
Sbjct: 1 MMSTAAVIGLSAGKRLL-SSSFYYSDLNEKLTCTSDHSLPCHHVPSIKNVITAKKSSDYS 59
Query: 448 ------RRPQSIKALKQHVD-TSNPLE--PWV-----IHEEDSGEVYLVDAVLLLQKSML 585
R+ QS K+LK+HVD T++P + W + E E V+ +LLLQKSML
Sbjct: 60 PSCVSSRKSQSAKSLKEHVDITADPSDVPSWFEMYEQLQNESDDEDESVEVLLLLQKSML 119
Query: 586 EKQWKLSV----IPKXXXXXXXXASKVTSSGTSARRRRLDCKRR------SMTMNNRSKQ 735
EKQW LS+ +T SGTSARRRR+D ++R S T + +K
Sbjct: 120 EKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKP 179
Query: 736 WKSVISPQLLHNSLKGYVKGVVSEQLLTHSQVVLLSQKIKAGXXXXXXXXXXXXXXGCEP 915
+S+I P+LL N LKGYVKGVVSE+LLTH++V+ LS+KI+ G GCEP
Sbjct: 180 LRSIIGPELLQNRLKGYVKGVVSEELLTHAEVLQLSKKIQVGLYLEEQKSRLKERLGCEP 239
Query: 916 SDDQLAASLRITRPALQSKMIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXX 1095
SDDQLA SL+++R LQS +IECSLARE+LAMSNVRLVMSIAQRYDN+GAEMAD
Sbjct: 240 SDDQLAVSLKMSRTDLQSTLIECSLARERLAMSNVRLVMSIAQRYDNVGAEMADLVQGGL 299
Query: 1096 XXXXXXXEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLSLIRNAKAR 1275
EKFD SKG+KISTYVYWWIRQGVSRALVE+SRTLRLPT+LHERLSLIRNAKAR
Sbjct: 300 IGLLRGIEKFDPSKGYKISTYVYWWIRQGVSRALVENSRTLRLPTYLHERLSLIRNAKAR 359
Query: 1276 LEERGITPSIDRIAESLNMSQRKVRNATEAVSKVFSLDREAFPSLNGLPGETLHSYIADN 1455
LEE+GITPS++ IA SLNMSQ+KVRNATEA SK++SLDREAFPSLNGLPGETLHSYIADN
Sbjct: 360 LEEKGITPSVNNIAASLNMSQKKVRNATEASSKMYSLDREAFPSLNGLPGETLHSYIADN 419
Query: 1456 RVENNPWNGVDEWALKDEVDKLINATLRERERDIIRLYYGLDNECLTWEDISRRIGLSRE 1635
+ENNPW+GVD WALKDEV+ LI++TLR+RER+IIRLYYGLDNECLTWEDIS+RIGLSRE
Sbjct: 420 HLENNPWHGVDVWALKDEVNNLISSTLRDREREIIRLYYGLDNECLTWEDISKRIGLSRE 479
Query: 1636 RVRQVGLVALEKLKHAAKKRRLDAMLVQ 1719
RVRQVGLVALEKLKHAA+KR+LDAML++
Sbjct: 480 RVRQVGLVALEKLKHAARKRQLDAMLIK 507
>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
Length = 503
Score = 561 bits (1447), Expect = e-157
Identities = 310/503 (61%), Positives = 360/503 (71%), Gaps = 19/503 (3%)
Frame = +1
Query: 271 MATAAVFGLSAAKRLLLGSTFYYXXXXXXXXXXXXP------LPPXXXXXXXXXXXXXXX 432
MATAAV GLS KRLL S Y +P
Sbjct: 1 MATAAVIGLSGGKRLLSSSYHYSDIIEKLSYGSDFGSTHYQIVPTKSLIVAKKSSNYTPT 60
Query: 433 XXXYNRRPQSIKALKQHVDTSNPL-EPWV-------IHEEDSGEVYLVDAVLLLQKSMLE 588
N++ QSIKALK+HVD + + +PW + E S Y V+A+LLLQKSMLE
Sbjct: 61 FPASNQQNQSIKALKEHVDDAPTIADPWFQSYNSNDLEVESSEMGYSVEALLLLQKSMLE 120
Query: 589 KQWKLSVIPKXXXXXXXXASK-----VTSSGTSARRRRLDCKRRSMTMNNRSKQWKSVIS 753
KQW LS + K VT SG SAR+RR++ KR++ + Q KS IS
Sbjct: 121 KQWNLSFEREVLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKIS 180
Query: 754 PQLLHNSLKGYVKGVVSEQLLTHSQVVLLSQKIKAGXXXXXXXXXXXXXXGCEPSDDQLA 933
P+LL + LKGYVKG+VSE+LL+H++VV LS+KIK G GCEPSDDQ+A
Sbjct: 181 PELLQHRLKGYVKGLVSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGCEPSDDQMA 240
Query: 934 ASLRITRPALQSKMIECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADXXXXXXXXXXXX 1113
SL+I+R L+++MIECSLAREKLAMSNVRLVMSIAQ+YDN+GAEM D
Sbjct: 241 TSLKISRTELRARMIECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRG 300
Query: 1114 XEKFDSSKGFKISTYVYWWIRQGVSRALVESSRTLRLPTHLHERLSLIRNAKARLEERGI 1293
EKFDSSKGFKISTYVYWWIRQGVSRALVE+SRTLRLP HLHERLSLIRNAK RLEERGI
Sbjct: 301 IEKFDSSKGFKISTYVYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGI 360
Query: 1294 TPSIDRIAESLNMSQRKVRNATEAVSKVFSLDREAFPSLNGLPGETLHSYIADNRVENNP 1473
TP+IDRIA+ LNMSQ+KVRNATEA+SK+ SLDREAFPSLNGL GET HSYIADNRVEN P
Sbjct: 361 TPTIDRIAKYLNMSQKKVRNATEAISKIISLDREAFPSLNGLQGETHHSYIADNRVENIP 420
Query: 1474 WNGVDEWALKDEVDKLINATLRERERDIIRLYYGLDNECLTWEDISRRIGLSRERVRQVG 1653
WNGVDEWALKDEV++LIN TL ERER+IIRLYYGL+ ECLTWEDIS+RIGLSRERVRQVG
Sbjct: 421 WNGVDEWALKDEVNRLINVTLVEREREIIRLYYGLEKECLTWEDISKRIGLSRERVRQVG 480
Query: 1654 LVALEKLKHAAKKRRLDAMLVQH 1722
LVALEKLKHAA+KR+++AML++H
Sbjct: 481 LVALEKLKHAARKRQMEAMLLKH 503