BLASTX nr result

ID: Scutellaria24_contig00002054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002054
         (1249 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arab...   426   e-117
ref|NP_176347.1| light-harvesting complex I chlorophyll a/b bind...   424   e-116
dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Ar...   421   e-115
ref|XP_002524566.1| chlorophyll A/B binding protein, putative [R...   421   e-115
gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Ara...   419   e-115

>ref|XP_002888084.1| hypothetical protein ARALYDRAFT_475174 [Arabidopsis lyrata subsp.
           lyrata] gi|297333925|gb|EFH64343.1| hypothetical protein
           ARALYDRAFT_475174 [Arabidopsis lyrata subsp. lyrata]
          Length = 273

 Score =  426 bits (1094), Expect = e-117
 Identities = 213/270 (78%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
 Frame = +3

Query: 66  RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 242
           RQI G +P+ S S+K SSF+VKA +TPPVKQG +R LWFAS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKATATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78

Query: 243 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 422
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138

Query: 423 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 602
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 603 AYPGGPIFNPLGFGKDEKSLNELKLKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 782
           AYPGGP FNPLGFGKDEKSL ELKLKEV                                
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEV---------------KNGRLAMLAILGYFIQG 243

Query: 783 XXXXXGPYQNLLDHLADPVNNNVLTSLKFH 872
                GPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 244 LVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273


>ref|NP_176347.1| light-harvesting complex I chlorophyll a/b binding protein 3
           [Arabidopsis thaliana] gi|334183551|ref|NP_001185280.1|
           light-harvesting complex I chlorophyll a/b binding
           protein 3 [Arabidopsis thaliana]
           gi|4585882|gb|AAD25555.1|AC005850_12 PSI type III
           chlorophyll a/b-binding protein [Arabidopsis thaliana]
           gi|16649019|gb|AAL24361.1| PSI type III chlorophyll
           a/b-binding protein [Arabidopsis thaliana]
           gi|20260044|gb|AAM13369.1| PSI type III chlorophyll
           a/b-binding protein [Arabidopsis thaliana]
           gi|332195725|gb|AEE33846.1| light-harvesting complex I
           chlorophyll a/b binding protein 3 [Arabidopsis thaliana]
           gi|332195727|gb|AEE33848.1| light-harvesting complex I
           chlorophyll a/b binding protein 3 [Arabidopsis thaliana]
          Length = 273

 Score =  424 bits (1090), Expect = e-116
 Identities = 213/270 (78%), Positives = 220/270 (81%), Gaps = 1/270 (0%)
 Frame = +3

Query: 66  RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 242
           RQI G +P+ S S+K SSF+VKAA+TPPVKQG +R LWFAS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78

Query: 243 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 422
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTG 138

Query: 423 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 602
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 603 AYPGGPIFNPLGFGKDEKSLNELKLKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 782
           AYPGGP FNPLGFGKDEKSL ELKLKEV                                
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEV---------------KNGRLAMLAILGYFIQG 243

Query: 783 XXXXXGPYQNLLDHLADPVNNNVLTSLKFH 872
                GPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 244 LVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273


>dbj|BAF00366.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
          Length = 273

 Score =  421 bits (1083), Expect = e-115
 Identities = 212/270 (78%), Positives = 219/270 (81%), Gaps = 1/270 (0%)
 Frame = +3

Query: 66  RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 242
           RQI G +P+ S S+K SSF+VKAA+TPPVKQG +R LWFAS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKAAATPPVKQGANRPLWFASSQSLSYLDGSLPGDYGFDP 78

Query: 243 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 422
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTG 138

Query: 423 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 602
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 603 AYPGGPIFNPLGFGKDEKSLNELKLKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 782
           AYPGGP FNPLGFGKDEKSL ELKLKEV                                
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEV---------------KNGRLAMLAILGYFIQG 243

Query: 783 XXXXXGPYQNLLDHLADPVNNNVLTSLKFH 872
                GPYQNLLDHLA PVNNNVLTSLKFH
Sbjct: 244 LVTGVGPYQNLLDHLAGPVNNNVLTSLKFH 273


>ref|XP_002524566.1| chlorophyll A/B binding protein, putative [Ricinus communis]
           gi|223536119|gb|EEF37774.1| chlorophyll A/B binding
           protein, putative [Ricinus communis]
          Length = 273

 Score =  421 bits (1081), Expect = e-115
 Identities = 211/270 (78%), Positives = 219/270 (81%), Gaps = 1/270 (0%)
 Frame = +3

Query: 66  RQILGGRP-LQSSRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 242
           RQILG R    SSRK SSF+V+A+STPPVKQG DRQLWFASKQSL+YLDGSLPGDFGFDP
Sbjct: 19  RQILGARSSFGSSRKSSSFVVRASSTPPVKQGADRQLWFASKQSLTYLDGSLPGDFGFDP 78

Query: 243 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 422
           LGLSDPEGTGGFIEP+WLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPKWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 138

Query: 423 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 602
           VIPPAGTY YWADPYTLFVFEMALMGFAEHRR QDW  PGSMGKQYFLGLEK L GSG+P
Sbjct: 139 VIPPAGTYDYWADPYTLFVFEMALMGFAEHRRFQDWAKPGSMGKQYFLGLEKFLGGSGDP 198

Query: 603 AYPGGPIFNPLGFGKDEKSLNELKLKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 782
           AYPGGP+FNPLGFGKDEKS+ ELKLKEV                                
Sbjct: 199 AYPGGPLFNPLGFGKDEKSMKELKLKEV---------------KNGRLAMLAILGYFVQG 243

Query: 783 XXXXXGPYQNLLDHLADPVNNNVLTSLKFH 872
                GPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 244 LVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273


>gb|AAA18206.1| PSI type III chlorophyll a/b-binding protein [Arabidopsis thaliana]
          Length = 273

 Score =  419 bits (1078), Expect = e-115
 Identities = 211/270 (78%), Positives = 218/270 (80%), Gaps = 1/270 (0%)
 Frame = +3

Query: 66  RQILGGRPLQS-SRKPSSFLVKAASTPPVKQGGDRQLWFASKQSLSYLDGSLPGDFGFDP 242
           RQI G +P+ S S+K SSF+VKAA+ PPVKQG +R LW AS QSLSYLDGSLPGD+GFDP
Sbjct: 19  RQIFGSKPVASASQKKSSFVVKAAAAPPVKQGANRPLWVASSQSLSYLDGSLPGDYGFDP 78

Query: 243 LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPETALPWFQTG 422
           LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIP ETALPWFQTG
Sbjct: 79  LGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPAETALPWFQTG 138

Query: 423 VIPPAGTYTYWADPYTLFVFEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 602
           VIPPAGTYTYWAD YTLFV EMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP
Sbjct: 139 VIPPAGTYTYWADNYTLFVLEMALMGFAEHRRLQDWYNPGSMGKQYFLGLEKGLAGSGNP 198

Query: 603 AYPGGPIFNPLGFGKDEKSLNELKLKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 782
           AYPGGP FNPLGFGKDEKSL ELKLKEV                                
Sbjct: 199 AYPGGPFFNPLGFGKDEKSLKELKLKEV---------------KNGRLAMLAILGYFIQG 243

Query: 783 XXXXXGPYQNLLDHLADPVNNNVLTSLKFH 872
                GPYQNLLDHLADPVNNNVLTSLKFH
Sbjct: 244 LVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273


Top