BLASTX nr result

ID: Scutellaria24_contig00002028 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00002028
         (922 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycin...   195   1e-47
ref|XP_002301922.1| predicted protein [Populus trichocarpa] gi|2...   194   2e-47
ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medic...   194   2e-47
ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [R...   193   4e-47
ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein S...   193   5e-47

>ref|NP_001237722.1| uncharacterized protein LOC100305856 [Glycine max]
           gi|356525557|ref|XP_003531391.1| PREDICTED: small
           nuclear ribonucleoprotein Sm D3-like [Glycine max]
           gi|255626793|gb|ACU13741.1| unknown [Glycine max]
          Length = 131

 Score =  195 bits (496), Expect = 1e-47
 Identities = 95/99 (95%), Positives = 98/99 (98%)
 Frame = +3

Query: 216 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVSQL 395
           MSRSLGIPVKLLHEASGH+VTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGK SQL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 396 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 512
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGKG+SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|XP_002301922.1| predicted protein [Populus trichocarpa] gi|222843648|gb|EEE81195.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  194 bits (494), Expect = 2e-47
 Identities = 95/99 (95%), Positives = 98/99 (98%)
 Frame = +3

Query: 216 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVSQL 395
           MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSM+ECEDNWNCQLESITYTAKDGKVSQL
Sbjct: 1   MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL 60

Query: 396 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 512
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGK +SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASL 99


>ref|XP_003630137.1| Small nuclear ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|355524159|gb|AET04613.1| Small nuclear
           ribonucleoprotein Sm D3 [Medicago truncatula]
           gi|388503694|gb|AFK39913.1| unknown [Medicago
           truncatula]
          Length = 131

 Score =  194 bits (493), Expect = 2e-47
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +3

Query: 216 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVSQL 395
           MSRSLGIPVKLLHEASGH+VTVELKSGELYRG+MIECEDNWNCQLESITYTAKDGK SQL
Sbjct: 1   MSRSLGIPVKLLHEASGHVVTVELKSGELYRGNMIECEDNWNCQLESITYTAKDGKTSQL 60

Query: 396 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 512
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGKG+SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASL 99


>ref|XP_002510673.1| small nuclear ribonucleoprotein, putative [Ricinus communis]
           gi|223551374|gb|EEF52860.1| small nuclear
           ribonucleoprotein, putative [Ricinus communis]
          Length = 131

 Score =  193 bits (491), Expect = 4e-47
 Identities = 94/99 (94%), Positives = 98/99 (98%)
 Frame = +3

Query: 216 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVSQL 395
           MSRSLGIPVKLLHEA+GHIVTVELKSGELYRGSM+ECEDNWNCQLESITYTAKDGKVSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHIVTVELKSGELYRGSMVECEDNWNCQLESITYTAKDGKVSQL 60

Query: 396 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 512
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGK +SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKSASL 99


>ref|XP_004164112.1| PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Cucumis
           sativus]
          Length = 132

 Score =  193 bits (490), Expect = 5e-47
 Identities = 93/99 (93%), Positives = 99/99 (100%)
 Frame = +3

Query: 216 MSRSLGIPVKLLHEASGHIVTVELKSGELYRGSMIECEDNWNCQLESITYTAKDGKVSQL 395
           MSRSLGIPVKLLHEA+GH+V+VELKSGELYRGSMIECEDNWNCQLE+ITYTAKDGKVSQL
Sbjct: 1   MSRSLGIPVKLLHEAAGHVVSVELKSGELYRGSMIECEDNWNCQLENITYTAKDGKVSQL 60

Query: 396 EHVFIRGSKVRFMVIPDMLKNAPMFKRLEARIKGKGSSL 512
           EHVFIRGSKVRFMVIPDMLKNAPMFKRL+ARIKGKG+SL
Sbjct: 61  EHVFIRGSKVRFMVIPDMLKNAPMFKRLDARIKGKGASL 99


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