BLASTX nr result

ID: Scutellaria24_contig00001977 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001977
         (1382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|2...   271   3e-70
ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|1...   267   4e-69
dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]        267   6e-69
ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein ...   266   7e-69
ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyra...   263   6e-68

>ref|XP_002317728.1| predicted protein [Populus trichocarpa] gi|222858401|gb|EEE95948.1|
            predicted protein [Populus trichocarpa]
          Length = 323

 Score =  271 bits (693), Expect = 3e-70
 Identities = 132/246 (53%), Positives = 159/246 (64%), Gaps = 12/246 (4%)
 Frame = -3

Query: 1281 GGPQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQNPNP--NPTIXXXXXXXXXXX 1108
            G PQ+YFC+QC+ TVTI+PSP  D+ CP+C  GF+EE ++PNP  NP             
Sbjct: 8    GVPQLYFCYQCDRTVTITPSPTSDLSCPNCQEGFLEECESPNPSSNPVDSGLGPAILLDE 67

Query: 1107 XXXXXXXXSANPNPVSRSGLFGESSIGP-----DSFDPATYXXXXXXXXXXSGIDYQFVI 943
                    +  P   + S     SS  P     D F+P  +           G + QFVI
Sbjct: 68   FASIFGGMAPTPRSSNNSTTTNSSSASPLFQDPDGFNPFAFLQNYLQTMRAGGANIQFVI 127

Query: 942  EDHPS-----ASGFSLPANIGDYFVGPGFEQLIQQLAENDPNRYGTPPASKSALEALPDI 778
            E++        +GF LPAN+GDYF+GPG EQLIQQLAENDPNRYGTPPASKSA+E LPDI
Sbjct: 128  ENNSGMGGMDTTGFRLPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPASKSAVENLPDI 187

Query: 777  NVDEALLKSELAQCAVCKDDFEMGTVVKQMPCKHVYHHDCILPWLELHNSCPVCRYELPT 598
             V + LL+S+ +QCAVCKD FE+G   KQ+PCKH+YH DCI PWLELHNSCPVCRYELPT
Sbjct: 188  KVTKELLESDSSQCAVCKDSFELGEEAKQIPCKHIYHKDCITPWLELHNSCPVCRYELPT 247

Query: 597  DDQDYE 580
            DD DYE
Sbjct: 248  DDPDYE 253


>ref|XP_002329726.1| predicted protein [Populus trichocarpa] gi|118486397|gb|ABK95038.1|
            unknown [Populus trichocarpa] gi|222870634|gb|EEF07765.1|
            predicted protein [Populus trichocarpa]
          Length = 345

 Score =  267 bits (683), Expect = 4e-69
 Identities = 131/251 (52%), Positives = 161/251 (64%), Gaps = 17/251 (6%)
 Frame = -3

Query: 1281 GGPQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQNPNPNPTIXXXXXXXXXXXXX 1102
            G  Q+YFC+QC  TVTI+P P   + CP+C+ GF+EE  +PNP+P               
Sbjct: 7    GVSQLYFCYQCNRTVTITP-PTTALSCPNCHEGFLEELDSPNPSPNPFDAGLGPALLLDD 65

Query: 1101 XXXXXXSANPNP------------VSRSGLFGESSIGPDSFDPATYXXXXXXXXXXSGID 958
                    NP P             S S LF +    PD F+P  +           G +
Sbjct: 66   FASIFGGMNPTPRSSTTSTTATNSSSASPLFQD----PDGFNPFVFLQNYLQTMRAGGAN 121

Query: 957  YQFVIEDHPSA-----SGFSLPANIGDYFVGPGFEQLIQQLAENDPNRYGTPPASKSALE 793
             QFVIE++P       +GF +PAN+GDYF+GPG EQLIQQLAENDPNRYGTPPA+KSA+E
Sbjct: 122  IQFVIENNPGMGGMDPTGFRVPANLGDYFIGPGLEQLIQQLAENDPNRYGTPPAAKSAVE 181

Query: 792  ALPDINVDEALLKSELAQCAVCKDDFEMGTVVKQMPCKHVYHHDCILPWLELHNSCPVCR 613
             LPD+ V E L++S+ +QCAVCKD FE+G V KQ+PCKH+YH DCI+PWLELHNSCPVCR
Sbjct: 182  NLPDVKVTEELMQSDSSQCAVCKDSFELGEVAKQIPCKHIYHKDCIMPWLELHNSCPVCR 241

Query: 612  YELPTDDQDYE 580
            YELPTDDQDYE
Sbjct: 242  YELPTDDQDYE 252


>dbj|BAB01310.1| unnamed protein product [Arabidopsis thaliana]
          Length = 386

 Score =  267 bits (682), Expect = 6e-69
 Identities = 136/273 (49%), Positives = 171/273 (62%), Gaps = 20/273 (7%)
 Frame = -3

Query: 1338 FGKSLQCSTMSSS-AVTVADGGPQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQN 1162
            F +S+  S ++S+ +   A    +M+FC+QC  TVTIS S   D FCP CN GF+EE+++
Sbjct: 54   FAESVMSSGVNSTGSAAAAPEVDKMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYED 113

Query: 1161 PNPNPTIXXXXXXXXXXXXXXXXXXXS---------ANPNPVSRSGLFGES--------- 1036
            PNPN ++                             A P+ +    LFG S         
Sbjct: 114  PNPNQSLNFNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQ 173

Query: 1035 -SIGPDSFDPATYXXXXXXXXXXSGIDYQFVIEDHPSASGFSLPANIGDYFVGPGFEQLI 859
             +   D+FDP T+          SG  ++FVIE+HPS  G  +P N GDYF GPG EQLI
Sbjct: 174  QNPQSDAFDPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLI 233

Query: 858  QQLAENDPNRYGTPPASKSALEALPDINVDEALLKSELAQCAVCKDDFEMGTVVKQMPCK 679
            QQLAENDPNRYGTPPASKSA++ALP + V + +LKSE+ QCAVC D+FE G+ VKQMPCK
Sbjct: 234  QQLAENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCK 293

Query: 678  HVYHHDCILPWLELHNSCPVCRYELPTDDQDYE 580
            HV+H DC+LPWLELHNSCPVCR+ELPTDD DYE
Sbjct: 294  HVFHQDCLLPWLELHNSCPVCRFELPTDDPDYE 326


>ref|NP_188629.1| E3 ubiquitin-protein ligase RING1-like protein [Arabidopsis thaliana]
            gi|75301658|sp|Q8LPN7.1|RNG1L_ARATH RecName: Full=E3
            ubiquitin-protein ligase RING1-like; AltName: Full=RING
            finger protein 1 gi|20465263|gb|AAM19951.1|
            AT3g19950/MPN9_19 [Arabidopsis thaliana]
            gi|23308365|gb|AAN18152.1| At3g19950/MPN9_19 [Arabidopsis
            thaliana] gi|332642790|gb|AEE76311.1| E3
            ubiquitin-protein ligase RING1-like protein [Arabidopsis
            thaliana]
          Length = 328

 Score =  266 bits (681), Expect = 7e-69
 Identities = 136/265 (51%), Positives = 167/265 (63%), Gaps = 19/265 (7%)
 Frame = -3

Query: 1317 STMSSSAVTVADGGPQMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQNPNPNPTIX 1138
            ST S++A    D   +M+FC+QC  TVTIS S   D FCP CN GF+EE+++PNPN ++ 
Sbjct: 7    STGSAAAAPEVD---KMFFCYQCNQTVTISISSSADPFCPICNQGFLEEYEDPNPNQSLN 63

Query: 1137 XXXXXXXXXXXXXXXXXXS---------ANPNPVSRSGLFGES----------SIGPDSF 1015
                                        A P+ +    LFG S          +   D+F
Sbjct: 64   FNPNSSDSFFPMADPFSTLLPLIFGSSAAAPSGMDFMSLFGPSMQPQARSTQQNPQSDAF 123

Query: 1014 DPATYXXXXXXXXXXSGIDYQFVIEDHPSASGFSLPANIGDYFVGPGFEQLIQQLAENDP 835
            DP T+          SG  ++FVIE+HPS  G  +P N GDYF GPG EQLIQQLAENDP
Sbjct: 124  DPFTFLQNHLQTLRSSGTHFEFVIENHPSDPGNRMPGNFGDYFFGPGLEQLIQQLAENDP 183

Query: 834  NRYGTPPASKSALEALPDINVDEALLKSELAQCAVCKDDFEMGTVVKQMPCKHVYHHDCI 655
            NRYGTPPASKSA++ALP + V + +LKSE+ QCAVC D+FE G+ VKQMPCKHV+H DC+
Sbjct: 184  NRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCL 243

Query: 654  LPWLELHNSCPVCRYELPTDDQDYE 580
            LPWLELHNSCPVCR+ELPTDD DYE
Sbjct: 244  LPWLELHNSCPVCRFELPTDDPDYE 268


>ref|XP_002883213.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
            gi|297329053|gb|EFH59472.1| zinc finger family protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 330

 Score =  263 bits (673), Expect = 6e-68
 Identities = 132/259 (50%), Positives = 159/259 (61%), Gaps = 28/259 (10%)
 Frame = -3

Query: 1272 QMYFCHQCEHTVTISPSPVGDIFCPSCNSGFVEEFQNPNPNPTIXXXXXXXXXXXXXXXX 1093
            +M+FC+QC  TVTIS S   D FCP CN GF+EE+++PNPNP++                
Sbjct: 19   KMFFCYQCNRTVTISISSSADPFCPICNQGFLEEYEDPNPNPSLNFNPNSVDSLFPM--- 75

Query: 1092 XXXSANPNPVSRSGLFGESSIGP----------------------------DSFDPATYX 997
                A+P       LFG S+  P                            D+FDP T+ 
Sbjct: 76   ----ADPFSTLLPLLFGSSAASPSGIDLMSSSFFAPSMQPQARSTQQNPQSDAFDPFTFL 131

Query: 996  XXXXXXXXXSGIDYQFVIEDHPSASGFSLPANIGDYFVGPGFEQLIQQLAENDPNRYGTP 817
                     SG   QFVIE+HPS  G  +P N GDYF GPG EQLIQQLAENDPNRYGTP
Sbjct: 132  QNHLQNLRSSGTHVQFVIENHPSDLGNRMPGNFGDYFFGPGLEQLIQQLAENDPNRYGTP 191

Query: 816  PASKSALEALPDINVDEALLKSELAQCAVCKDDFEMGTVVKQMPCKHVYHHDCILPWLEL 637
            PASKSA++ LP + V + +LKSE+ QCAVC D+FE G+ VKQMPCKHV+H DC+LPWL+L
Sbjct: 192  PASKSAIDGLPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLQL 251

Query: 636  HNSCPVCRYELPTDDQDYE 580
            HNSCPVCR+ELPTDD DYE
Sbjct: 252  HNSCPVCRFELPTDDPDYE 270


Top