BLASTX nr result

ID: Scutellaria24_contig00001792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001792
         (688 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK34682.1| unknown [Lotus japonicus] gi|388505778|gb|AFK4095...   221   8e-56
ref|NP_001234116.1| 60S ribosomal protein L35-like [Solanum lyco...   220   2e-55
gb|AAZ32938.1| putative 60S ribosomal protein L35 [Rheum australe]    219   4e-55
gb|AFK40432.1| unknown [Lotus japonicus]                              219   5e-55
ref|XP_004150961.1| PREDICTED: 60S ribosomal protein L35-like [C...   218   7e-55

>gb|AFK34682.1| unknown [Lotus japonicus] gi|388505778|gb|AFK40955.1| unknown
           [Lotus japonicus]
          Length = 123

 Score =  221 bits (564), Expect = 8e-56
 Identities = 114/123 (92%), Positives = 121/123 (98%)
 Frame = +1

Query: 49  MARIKVHELRQKNKVELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 228
           MARIKVHELRQKNK +LL+QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRL+IAQVLTV
Sbjct: 1   MARIKVHELRQKNKADLLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLNIAQVLTV 60

Query: 229 ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEKQKKKEMYFPLRKYA 408
           ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTE++KKKE YFP+RK+A
Sbjct: 61  ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKETYFPMRKFA 120

Query: 409 IKV 417
           IKV
Sbjct: 121 IKV 123


>ref|NP_001234116.1| 60S ribosomal protein L35-like [Solanum lycopersicum]
           gi|62751093|dbj|BAD95794.1| similar to 60S ribosomal
           protein L35 [Solanum lycopersicum]
          Length = 123

 Score =  220 bits (560), Expect = 2e-55
 Identities = 114/123 (92%), Positives = 119/123 (96%)
 Frame = +1

Query: 49  MARIKVHELRQKNKVELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 228
           MARIKVHELR K+K ELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRNKSKTELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 229 ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEKQKKKEMYFPLRKYA 408
           ISQKQK ALRE YKNKKYLPLDLRPKKTRAIR+RLTKHQASLKTE++KKKE+YFPLRKYA
Sbjct: 61  ISQKQKLALREAYKNKKYLPLDLRPKKTRAIRKRLTKHQASLKTEREKKKELYFPLRKYA 120

Query: 409 IKV 417
           IKV
Sbjct: 121 IKV 123


>gb|AAZ32938.1| putative 60S ribosomal protein L35 [Rheum australe]
          Length = 123

 Score =  219 bits (558), Expect = 4e-55
 Identities = 114/123 (92%), Positives = 119/123 (96%)
 Frame = +1

Query: 49  MARIKVHELRQKNKVELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 228
           MARIKVHELRQK KV+LLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRL IAQVLTV
Sbjct: 1   MARIKVHELRQKAKVDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLQIAQVLTV 60

Query: 229 ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEKQKKKEMYFPLRKYA 408
           ISQKQKAALRE YKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTE++KK+E+YFP RKYA
Sbjct: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKREIYFPTRKYA 120

Query: 409 IKV 417
           IKV
Sbjct: 121 IKV 123


>gb|AFK40432.1| unknown [Lotus japonicus]
          Length = 123

 Score =  219 bits (557), Expect = 5e-55
 Identities = 113/123 (91%), Positives = 119/123 (96%)
 Frame = +1

Query: 49  MARIKVHELRQKNKVELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 228
           MARIKV+ELR K K ELL+QLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVYELRNKTKAELLSQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 229 ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEKQKKKEMYFPLRKYA 408
           ISQKQKAALRE YKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTE++KKKE+YFPLRKYA
Sbjct: 61  ISQKQKAALREAYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEREKKKELYFPLRKYA 120

Query: 409 IKV 417
           +KV
Sbjct: 121 VKV 123


>ref|XP_004150961.1| PREDICTED: 60S ribosomal protein L35-like [Cucumis sativus]
           gi|449522333|ref|XP_004168181.1| PREDICTED: 60S
           ribosomal protein L35-like [Cucumis sativus]
          Length = 123

 Score =  218 bits (556), Expect = 7e-55
 Identities = 115/123 (93%), Positives = 119/123 (96%)
 Frame = +1

Query: 49  MARIKVHELRQKNKVELLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 228
           MARIKVHELRQK+K +LLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV
Sbjct: 1   MARIKVHELRQKSKGDLLAQLKDLKAELALLRVAKVTGGAPNKLSKIKVVRLSIAQVLTV 60

Query: 229 ISQKQKAALREVYKNKKYLPLDLRPKKTRAIRRRLTKHQASLKTEKQKKKEMYFPLRKYA 408
           ISQKQKAALRE YK KK LPLDLRPKKTRAIRRRLTKHQASLKTE+QKKKEMY+PLRKYA
Sbjct: 61  ISQKQKAALREAYKKKKLLPLDLRPKKTRAIRRRLTKHQASLKTERQKKKEMYYPLRKYA 120

Query: 409 IKV 417
           IKV
Sbjct: 121 IKV 123


Top