BLASTX nr result

ID: Scutellaria24_contig00001753 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001753
         (2186 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding pro...   447   e-123
ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein C...   439   e-120
gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotia...   437   e-120
ref|XP_002533515.1| chlorophyll A/B binding protein, putative [R...   436   e-120
gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 pr...   433   e-119

>sp|P27524.1|CB4A_SOLLC RecName: Full=Chlorophyll a-b binding protein CP24 10A,
            chloroplastic; Short=CAB-10A; Short=LHCP; Flags:
            Precursor gi|170394|gb|AAA34143.1| a-binding protein
            [Solanum lycopersicum]
          Length = 256

 Score =  447 bits (1149), Expect = e-123
 Identities = 212/248 (85%), Positives = 227/248 (91%)
 Frame = -3

Query: 1995 MASTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAAKKSWIPAVK 1816
            MA+TSAA+LNGL S+FLTGG KS ALL+            PKRF V+AAAAKKSWIPAV+
Sbjct: 1    MATTSAAVLNGLSSSFLTGGNKSQALLAAPLAARVGGAATPKRFTVLAAAAKKSWIPAVR 60

Query: 1815 GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 1636
            GGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW
Sbjct: 61   GGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 120

Query: 1635 SGIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTS 1456
            SGIPWFEAGA P A+APFSFGTLLGTQLILMGWVESKRWVDFF+P+SQSVEWATPWS+T+
Sbjct: 121  SGIPWFEAGADPGAIAPFSFGTLLGTQLILMGWVESKRWVDFFDPDSQSVEWATPWSKTA 180

Query: 1455 ENFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLIF 1276
            ENFAN TGEQGYPGGKFFDPL +AGTLNNGVYVPDTEKLERLK+AEIKHARLAM+AMLIF
Sbjct: 181  ENFANFTGEQGYPGGKFFDPLALAGTLNNGVYVPDTEKLERLKVAEIKHARLAMLAMLIF 240

Query: 1275 YFEAGQGK 1252
            YFEAGQGK
Sbjct: 241  YFEAGQGK 248


>ref|XP_002263201.1| PREDICTED: chlorophyll a-b binding protein CP24 10A, chloroplastic
            [Vitis vinifera] gi|147804704|emb|CAN71620.1|
            hypothetical protein VITISV_015544 [Vitis vinifera]
          Length = 257

 Score =  439 bits (1129), Expect = e-120
 Identities = 209/249 (83%), Positives = 225/249 (90%), Gaps = 1/249 (0%)
 Frame = -3

Query: 1995 MASTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXA-PKRFIVVAAAAKKSWIPAV 1819
            MA+TSAA+LNGLGS FLTGGK+S +LLS             P+R IVVAAA KKSW+P V
Sbjct: 1    MAATSAAVLNGLGSPFLTGGKRSQSLLSAGVAAKAGAAVPAPRRLIVVAAAPKKSWLPGV 60

Query: 1818 KGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 1639
            K GGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQA
Sbjct: 61   KAGGNLVDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQA 120

Query: 1638 WSGIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRT 1459
            WSGIPWFEAGAAP AVAPFSFGTLLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWSRT
Sbjct: 121  WSGIPWFEAGAAPGAVAPFSFGTLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRT 180

Query: 1458 SENFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLI 1279
            +ENFANATGEQGYPGGKFFDPL +AGT+ +GVY+PD EKLERLKLAEIKHAR+AM+AMLI
Sbjct: 181  AENFANATGEQGYPGGKFFDPLSLAGTIKDGVYIPDVEKLERLKLAEIKHARIAMLAMLI 240

Query: 1278 FYFEAGQGK 1252
            FYFEAGQGK
Sbjct: 241  FYFEAGQGK 249


>gb|ABG73416.1| chloroplast pigment-binding protein CP24 [Nicotiana tabacum]
          Length = 257

 Score =  437 bits (1124), Expect = e-120
 Identities = 210/249 (84%), Positives = 224/249 (89%), Gaps = 1/249 (0%)
 Frame = -3

Query: 1995 MASTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAA-KKSWIPAV 1819
            MA+TSAA+LNGL S+FLTGGK S ALL             PKR IV AAAA KKSWIPAV
Sbjct: 1    MATTSAAVLNGLSSSFLTGGKNSQALLGAPVAARIGGLATPKRCIVAAAAAPKKSWIPAV 60

Query: 1818 KGGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 1639
            KGGGN +DPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA
Sbjct: 61   KGGGNLLDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQA 120

Query: 1638 WSGIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRT 1459
            WSGIPWFEAGA P A+APFSFG+LLGTQL+LMGWVESKRWVDFFNPESQSVEWATPWS+T
Sbjct: 121  WSGIPWFEAGADPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSKT 180

Query: 1458 SENFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLI 1279
            +ENFAN TGEQGYPGGKFFDPL +AGTL +GVY+PDTEKLERLK+AEIKHARLAM+AMLI
Sbjct: 181  AENFANFTGEQGYPGGKFFDPLSLAGTLQDGVYIPDTEKLERLKVAEIKHARLAMLAMLI 240

Query: 1278 FYFEAGQGK 1252
            FYFEAGQGK
Sbjct: 241  FYFEAGQGK 249


>ref|XP_002533515.1| chlorophyll A/B binding protein, putative [Ricinus communis]
            gi|223526625|gb|EEF28871.1| chlorophyll A/B binding
            protein, putative [Ricinus communis]
          Length = 256

 Score =  436 bits (1122), Expect = e-120
 Identities = 209/247 (84%), Positives = 224/247 (90%)
 Frame = -3

Query: 1992 ASTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAAKKSWIPAVKG 1813
            A+TS A+LNGLGS+FL G K+SHALLS           + K F+V+AA  KKSWIPAVKG
Sbjct: 3    AATSGAVLNGLGSSFLRGPKRSHALLSAIGANRTASGASTK-FVVMAAQPKKSWIPAVKG 61

Query: 1812 GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAWS 1633
            GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAV+GIFVGQAWS
Sbjct: 62   GGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVIGIFVGQAWS 121

Query: 1632 GIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTSE 1453
            GIPWFEAGA P A+APFSFG+LLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWSRTSE
Sbjct: 122  GIPWFEAGADPGAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSRTSE 181

Query: 1452 NFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLIFY 1273
            NFANATGEQGYPGGKFFDPLG AGTL +GVY+PD EKLERLK+AEIKHARLAM+AMLIFY
Sbjct: 182  NFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDVEKLERLKVAEIKHARLAMLAMLIFY 241

Query: 1272 FEAGQGK 1252
            FEAGQGK
Sbjct: 242  FEAGQGK 248


>gb|AAD27882.2|AF139470_1 chlorophyll a/b-binding protein CP24 precursor [Vigna radiata]
          Length = 258

 Score =  433 bits (1114), Expect = e-119
 Identities = 204/248 (82%), Positives = 226/248 (91%), Gaps = 1/248 (0%)
 Frame = -3

Query: 1992 ASTSAALLNGLGSAFLTGGKKSHALLSXXXXXXXXXXXAPKRFIVVAAAA-KKSWIPAVK 1816
            A+TS A+LNGLGS+FL+GG +S  LL+           +P+R IVVAAAA KKSWIP V+
Sbjct: 3    AATSGAVLNGLGSSFLSGGSRSQTLLATSIGGKVGVAVSPRRLIVVAAAAPKKSWIPGVR 62

Query: 1815 GGGNFIDPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 1636
            GGGN +DPEWLDGSLPGD+GFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW
Sbjct: 63   GGGNLVDPEWLDGSLPGDFGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVLGIFVGQAW 122

Query: 1635 SGIPWFEAGAAPSAVAPFSFGTLLGTQLILMGWVESKRWVDFFNPESQSVEWATPWSRTS 1456
            SG+PWFEAGA P+A+APFSFG+LLGTQLILMGWVESKRWVDFFNP+SQSVEWATPWS+T+
Sbjct: 123  SGVPWFEAGADPNAIAPFSFGSLLGTQLILMGWVESKRWVDFFNPDSQSVEWATPWSKTA 182

Query: 1455 ENFANATGEQGYPGGKFFDPLGVAGTLNNGVYVPDTEKLERLKLAEIKHARLAMVAMLIF 1276
            ENFANATGEQGYPGGKFFDPLG AGTL +GVY+PDTEKLERLKLAEIKHAR+AM+AMLIF
Sbjct: 183  ENFANATGEQGYPGGKFFDPLGFAGTLKDGVYIPDTEKLERLKLAEIKHARIAMLAMLIF 242

Query: 1275 YFEAGQGK 1252
            YFEAGQGK
Sbjct: 243  YFEAGQGK 250


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