BLASTX nr result

ID: Scutellaria24_contig00001594 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001594
         (711 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK41314.1| unknown [Lotus japonicus]                              165   7e-39
ref|XP_002880069.1| hypothetical protein ARALYDRAFT_903785 [Arab...   165   1e-38
ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative ...   165   1e-38
ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like prote...   164   2e-38
ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|1...   164   2e-38

>gb|AFK41314.1| unknown [Lotus japonicus]
          Length = 90

 Score =  165 bits (418), Expect = 7e-39
 Identities = 83/90 (92%), Positives = 85/90 (94%)
 Frame = -1

Query: 519 MSGAGEKLSSTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 340
           MSGA +   +TKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG
Sbjct: 1   MSGAEKGSGTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVNG 60

Query: 339 QLKNKYGDAFIRGNNVLYISTSKGTLAEGA 250
           QLKNKYGDAFIRGNNVLYISTSK TLAEGA
Sbjct: 61  QLKNKYGDAFIRGNNVLYISTSKRTLAEGA 90


>ref|XP_002880069.1| hypothetical protein ARALYDRAFT_903785 [Arabidopsis lyrata subsp.
           lyrata] gi|297325908|gb|EFH56328.1| hypothetical protein
           ARALYDRAFT_903785 [Arabidopsis lyrata subsp. lyrata]
          Length = 91

 Score =  165 bits (417), Expect = 1e-38
 Identities = 81/91 (89%), Positives = 87/91 (95%), Gaps = 1/91 (1%)
 Frame = -1

Query: 519 MSGAGEKLS-STKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 343
           MSG GEK S +TKTPADFLKSIRG+PVVVKLNSGVDYRGIL CLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGVGEKASGTTKTPADFLKSIRGKPVVVKLNSGVDYRGILTCLDGYMNIAMEQTEEYVN 60

Query: 342 GQLKNKYGDAFIRGNNVLYISTSKGTLAEGA 250
           GQLKNKYGDAF+RGNNVLYIST+KGTL++GA
Sbjct: 61  GQLKNKYGDAFVRGNNVLYISTTKGTLSDGA 91


>ref|XP_002534408.1| small nuclear ribonucleoprotein f, putative [Ricinus communis]
           gi|223525355|gb|EEF27977.1| small nuclear
           ribonucleoprotein f, putative [Ricinus communis]
          Length = 91

 Score =  165 bits (417), Expect = 1e-38
 Identities = 84/91 (92%), Positives = 87/91 (95%), Gaps = 1/91 (1%)
 Frame = -1

Query: 519 MSGAGEKLSST-KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 343
           MSG GEK S+T KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSGGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 342 GQLKNKYGDAFIRGNNVLYISTSKGTLAEGA 250
           GQLKNKYGDAFIRGNNVLYIST+K TLA+GA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTTKRTLADGA 91


>ref|XP_002278412.1| PREDICTED: U6 snRNA-associated Sm-like protein LSm6 [Vitis
           vinifera] gi|296084324|emb|CBI24712.3| unnamed protein
           product [Vitis vinifera]
          Length = 91

 Score =  164 bits (415), Expect = 2e-38
 Identities = 85/91 (93%), Positives = 86/91 (94%), Gaps = 1/91 (1%)
 Frame = -1

Query: 519 MSGAGEKLSST-KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 343
           MS  GEK S+T KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSTGGEKGSATTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 342 GQLKNKYGDAFIRGNNVLYISTSKGTLAEGA 250
           GQLKNKYGDAFIRGNNVLYISTSK TLAEGA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLAEGA 91


>ref|XP_002316168.1| predicted protein [Populus trichocarpa] gi|118482915|gb|ABK93371.1|
           unknown [Populus trichocarpa]
           gi|222865208|gb|EEF02339.1| predicted protein [Populus
           trichocarpa]
          Length = 91

 Score =  164 bits (414), Expect = 2e-38
 Identities = 84/91 (92%), Positives = 86/91 (94%), Gaps = 1/91 (1%)
 Frame = -1

Query: 519 MSGAGEKLSST-KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 343
           MS  GEK S+T KTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN
Sbjct: 1   MSSGGEKGSTTTKTPADFLKSIRGRPVVVKLNSGVDYRGILACLDGYMNIAMEQTEEYVN 60

Query: 342 GQLKNKYGDAFIRGNNVLYISTSKGTLAEGA 250
           GQLKNKYGDAFIRGNNVLYISTSK TLA+GA
Sbjct: 61  GQLKNKYGDAFIRGNNVLYISTSKRTLADGA 91


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