BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001563
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   138   5e-31
ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   138   5e-31
sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, c...   131   5e-29
sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A,...   131   5e-29
ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|2...   127   1e-27

>ref|XP_003632613.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 2 [Vitis
           vinifera]
          Length = 254

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/85 (74%), Positives = 77/85 (90%)
 Frame = +3

Query: 3   FRGPRGGSSFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFV 182
           FRGPRGG++ ++TNR+YVGNL+WGVDDL LETLF+E GKV EA V+YDRE+GRSRGFGFV
Sbjct: 157 FRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFV 216

Query: 183 AYSSAQEVDSAIRSLDGVDVNGRAI 257
            Y+SA+EV+ AI SLDGVD+NGR+I
Sbjct: 217 TYNSAEEVNRAIESLDGVDLNGRSI 241


>ref|XP_002281642.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic isoform 1 [Vitis
           vinifera]
          Length = 288

 Score =  138 bits (347), Expect = 5e-31
 Identities = 63/85 (74%), Positives = 77/85 (90%)
 Frame = +3

Query: 3   FRGPRGGSSFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFV 182
           FRGPRGG++ ++TNR+YVGNL+WGVDDL LETLF+E GKV EA V+YDRE+GRSRGFGFV
Sbjct: 191 FRGPRGGANLNSTNRIYVGNLSWGVDDLALETLFSEQGKVTEARVIYDRETGRSRGFGFV 250

Query: 183 AYSSAQEVDSAIRSLDGVDVNGRAI 257
            Y+SA+EV+ AI SLDGVD+NGR+I
Sbjct: 251 TYNSAEEVNRAIESLDGVDLNGRSI 275



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 34/80 (42%), Positives = 50/80 (62%)
 Frame = +3

Query: 18  GGSSFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFVAYSSA 197
           G  SF    +L+VGNL + VD   L  LF + G V    V+YD+ +GRSRGFGFV  S+ 
Sbjct: 82  GEPSFSPDLKLFVGNLPFNVDSAGLAGLFEQAGNVEMVEVIYDKITGRSRGFGFVTMSTV 141

Query: 198 QEVDSAIRSLDGVDVNGRAI 257
           +EV++A +  +G ++ GR +
Sbjct: 142 EEVEAAAQQFNGYELEGRQL 161


>sp|P49313.1|ROC1_NICPL RecName: Full=30 kDa ribonucleoprotein, chloroplastic; AltName:
           Full=CP-RBP30; Flags: Precursor gi|19708|emb|CAA46234.1|
           RNA binding protein 30 [Nicotiana plumbaginifolia]
          Length = 279

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/83 (75%), Positives = 73/83 (87%)
 Frame = +3

Query: 9   GPRGGSSFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFVAY 188
           G RGG SFD++NR+YVGNLAWGVD   LETLF+E GKV +A VVYDR+SGRSRGFGFV Y
Sbjct: 183 GSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTY 242

Query: 189 SSAQEVDSAIRSLDGVDVNGRAI 257
           SSA+EV++AI SLDGVD+NGRAI
Sbjct: 243 SSAEEVNNAIESLDGVDLNGRAI 265



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = +3

Query: 27  SFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFVAYSSAQEV 206
           +F    +++VGNL +  D   L  LF   G V    V+YD+ +GRSRGFGFV  SS +EV
Sbjct: 82  NFSPDLKIFVGNLLFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

Query: 207 DSAIRSLDGVDVNGRAI 257
           ++A +  +G +++GRA+
Sbjct: 142 EAACQQFNGYELDGRAL 158


>sp|Q08935.1|ROC1_NICSY RecName: Full=29 kDa ribonucleoprotein A, chloroplastic; AltName:
           Full=CP29A; Flags: Precursor gi|19754|emb|CAA43427.1|
           29kD A ribonucleoprotein [Nicotiana sylvestris]
          Length = 273

 Score =  131 bits (330), Expect = 5e-29
 Identities = 63/83 (75%), Positives = 73/83 (87%)
 Frame = +3

Query: 9   GPRGGSSFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFVAY 188
           G RGG SFD++NR+YVGNLAWGVD   LETLF+E GKV +A VVYDR+SGRSRGFGFV Y
Sbjct: 177 GSRGGGSFDSSNRVYVGNLAWGVDQDALETLFSEQGKVVDAKVVYDRDSGRSRGFGFVTY 236

Query: 189 SSAQEVDSAIRSLDGVDVNGRAI 257
           SSA+EV++AI SLDGVD+NGRAI
Sbjct: 237 SSAEEVNNAIESLDGVDLNGRAI 259



 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = +3

Query: 27  SFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFVAYSSAQEV 206
           +F    +++VGNL +  D   L  LF   G V    V+YD+ +GRSRGFGFV  SS +EV
Sbjct: 82  NFSPDLKIFVGNLPFSADSAALAELFERAGNVEMVEVIYDKLTGRSRGFGFVTMSSKEEV 141

Query: 207 DSAIRSLDGVDVNGRAI 257
           ++A +  +G +++GRA+
Sbjct: 142 EAACQQFNGYELDGRAL 158


>ref|XP_002323470.1| predicted protein [Populus trichocarpa] gi|222868100|gb|EEF05231.1|
           predicted protein [Populus trichocarpa]
          Length = 273

 Score =  127 bits (319), Expect = 1e-27
 Identities = 59/84 (70%), Positives = 73/84 (86%)
 Frame = +3

Query: 6   RGPRGGSSFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFVA 185
           RGPRGG +FD+ NR+YVGNL+W VD+L LETLF E G+V +A VVYDR+SGRSRGFGFV 
Sbjct: 177 RGPRGGETFDSGNRVYVGNLSWNVDNLALETLFREKGRVMDAKVVYDRDSGRSRGFGFVT 236

Query: 186 YSSAQEVDSAIRSLDGVDVNGRAI 257
           YSSA+EVD+AI SL+G +++GRAI
Sbjct: 237 YSSAEEVDNAIDSLNGAELDGRAI 260



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 32/77 (41%), Positives = 49/77 (63%)
 Frame = +3

Query: 27  SFDNTNRLYVGNLAWGVDDLTLETLFNEHGKVREASVVYDRESGRSRGFGFVAYSSAQEV 206
           SF    +L+VGNL + VD   L  LF   G V    V+YD+ +GRSRGFGFV  ++ +EV
Sbjct: 85  SFSQDLKLFVGNLPFNVDSARLAGLFETAGNVEMVEVIYDKVTGRSRGFGFVTMTTIEEV 144

Query: 207 DSAIRSLDGVDVNGRAI 257
           ++A +  +G +++GR +
Sbjct: 145 EAASKQFNGYELDGRTL 161