BLASTX nr result

ID: Scutellaria24_contig00001431 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001431
         (1302 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

prf||1609235A chlorophyll a/b binding protein                         466   e-129
sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding pro...   464   e-128
gb|AFK45661.1| unknown [Medicago truncatula]                          456   e-126
gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris...   455   e-125
gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris...   454   e-125

>prf||1609235A chlorophyll a/b binding protein
          Length = 273

 Score =  466 bits (1200), Expect = e-129
 Identities = 230/273 (84%), Positives = 243/273 (89%), Gaps = 1/273 (0%)
 Frame = +3

Query: 240  MATQALVXXXXXXXXADAVRQILGGRPAQSA-RKVSFLVKAAATPPVKQGANRQLWFASK 416
            MATQAL+        A+A RQI+G R +QS  RK SF+V+AA+TPPVKQGANRQLWFASK
Sbjct: 1    MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASK 60

Query: 417  QSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEIL 596
            QSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEP+WLAYGE+INGRFAMLGAAGAIAPEIL
Sbjct: 61   QSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIL 120

Query: 597  GKAGLIPPETALPWFQTGVIPPAGTYSYWADNYTLFVLEMALMGFAEHRRFQDWANPGSM 776
            GKAGLIP ETAL WFQTGVIPPAGTY+YWADNYTLFVLEMALMGFAEHRRFQDWA PGSM
Sbjct: 121  GKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSM 180

Query: 777  GKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYF 956
            GKQYFLGLEKGLGGSGDPAY            KDEKSMKELKLKE+KNGRLAMLAILGYF
Sbjct: 181  GKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240

Query: 957  IQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 1055
            IQ LVTGVGP+QNLLDHLADPVNNNVLTSLKFH
Sbjct: 241  IQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273


>sp|P27522.1|CB13_SOLLC RecName: Full=Chlorophyll a-b binding protein 8, chloroplastic;
            AltName: Full=LHCI type III CAB-8; Flags: Precursor
            gi|19182|emb|CAA33330.1| Type III chlorophyll a/b-binding
            protein [Solanum lycopersicum]
          Length = 273

 Score =  464 bits (1195), Expect = e-128
 Identities = 229/273 (83%), Positives = 242/273 (88%), Gaps = 1/273 (0%)
 Frame = +3

Query: 240  MATQALVXXXXXXXXADAVRQILGGRPAQSA-RKVSFLVKAAATPPVKQGANRQLWFASK 416
            MATQAL+        A+A RQI+G R +QS  RK SF+V+AA+TPPVKQGANRQLWFASK
Sbjct: 1    MATQALISSSSISTSAEAARQIIGSRISQSVTRKASFVVRAASTPPVKQGANRQLWFASK 60

Query: 417  QSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEIL 596
            QSL+YLDG LPGDFGFDPLGLSDPEGTGGFIEP+WLAYGE+INGRFAMLGAAGAIAPEIL
Sbjct: 61   QSLSYLDGRLPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEVINGRFAMLGAAGAIAPEIL 120

Query: 597  GKAGLIPPETALPWFQTGVIPPAGTYSYWADNYTLFVLEMALMGFAEHRRFQDWANPGSM 776
            GKAGLIP ETAL WFQTGVIPPAGTY+YWADNYTLFVLEMALMGFAEHRRFQDWA PGSM
Sbjct: 121  GKAGLIPQETALAWFQTGVIPPAGTYNYWADNYTLFVLEMALMGFAEHRRFQDWAKPGSM 180

Query: 777  GKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYF 956
            GKQYFLGLEKGLGGSGDPAY            KDEKSMKELKLKE+KNGRLAMLAILGYF
Sbjct: 181  GKQYFLGLEKGLGGSGDPAYPGGPLFNPLGFGKDEKSMKELKLKEIKNGRLAMLAILGYF 240

Query: 957  IQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 1055
            IQ LVTGVGP+QNLLDHLADPVNNNVLTSLKFH
Sbjct: 241  IQALVTGVGPYQNLLDHLADPVNNNVLTSLKFH 273


>gb|AFK45661.1| unknown [Medicago truncatula]
          Length = 277

 Score =  456 bits (1172), Expect = e-126
 Identities = 229/277 (82%), Positives = 241/277 (87%), Gaps = 5/277 (1%)
 Frame = +3

Query: 240  MATQALVXXXXXXXXADAVRQILGGRPAQSA----RKVSFLVKAAATPPVKQ-GANRQLW 404
            MATQALV        A+AVRQ  G R   S+    RK SF+VKAA++PPVKQ GANRQLW
Sbjct: 1    MATQALVSSSSLTFAAEAVRQSFGARSLPSSIGSSRKGSFVVKAASSPPVKQNGANRQLW 60

Query: 405  FASKQSLTYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIA 584
            FASKQSL+YLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIA
Sbjct: 61   FASKQSLSYLDGSLPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIA 120

Query: 585  PEILGKAGLIPPETALPWFQTGVIPPAGTYSYWADNYTLFVLEMALMGFAEHRRFQDWAN 764
            PEILGKAGLIP ETALPWFQTGVIPPAGTY+YWADNYTLFV+EMA MGFAEHRRFQDW N
Sbjct: 121  PEILGKAGLIPAETALPWFQTGVIPPAGTYNYWADNYTLFVMEMAFMGFAEHRRFQDWYN 180

Query: 765  PGSMGKQYFLGLEKGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAI 944
            PGSMGKQYFLGLEKGLGGSG+PAY            KDEKS+KELKLKEVKNGRLAMLAI
Sbjct: 181  PGSMGKQYFLGLEKGLGGSGEPAYPGGPIFNPLGFGKDEKSLKELKLKEVKNGRLAMLAI 240

Query: 945  LGYFIQGLVTGVGPFQNLLDHLADPVNNNVLTSLKFH 1055
            LGYFIQ LVTGVGP+QNLLDHLADPVNNN+LTSLKFH
Sbjct: 241  LGYFIQALVTGVGPYQNLLDHLADPVNNNILTSLKFH 277


>gb|ABJ99590.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  455 bits (1171), Expect = e-125
 Identities = 225/264 (85%), Positives = 235/264 (89%), Gaps = 8/264 (3%)
 Frame = +3

Query: 288  DAVRQILGGRPAQ--------SARKVSFLVKAAATPPVKQGANRQLWFASKQSLTYLDGS 443
            +A RQ+LGGRP Q        S+RK SF+VKAA+TPPVKQGA+RQLWFASKQSL+YLDGS
Sbjct: 12   EAGRQLLGGRPVQWTPSRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGS 71

Query: 444  LPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPE 623
            LPGDFGFDPLGLSDPEGTGGFIEP+WLAYGEIINGR+AMLG AGAIAPEILGK GLIPPE
Sbjct: 72   LPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPE 131

Query: 624  TALPWFQTGVIPPAGTYSYWADNYTLFVLEMALMGFAEHRRFQDWANPGSMGKQYFLGLE 803
            TALPWFQTGVIPPAGTYSYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMGKQYFLG E
Sbjct: 132  TALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFE 191

Query: 804  KGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVG 983
            K LGGSGDPAY            KDEKSMKELKLKEVKNGRLAMLAILG+FIQGLVTGVG
Sbjct: 192  KFLGGSGDPAYPGGPIFNPLGFGKDEKSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVG 251

Query: 984  PFQNLLDHLADPVNNNVLTSLKFH 1055
            PFQNLLDHLADPVNNNVLTSLKFH
Sbjct: 252  PFQNLLDHLADPVNNNVLTSLKFH 275


>gb|ABJ99591.1| type III chlorophyll a/b-binding protein [Lycoris aurea]
          Length = 275

 Score =  454 bits (1168), Expect = e-125
 Identities = 224/264 (84%), Positives = 235/264 (89%), Gaps = 8/264 (3%)
 Frame = +3

Query: 288  DAVRQILGGRPAQ--------SARKVSFLVKAAATPPVKQGANRQLWFASKQSLTYLDGS 443
            +A RQ+LGGRP Q        S+RK SF+VKAA+TPPVKQGA+RQLWFASKQSL+YLDGS
Sbjct: 12   EAGRQLLGGRPVQWTPTRSFSSSRKASFVVKAASTPPVKQGADRQLWFASKQSLSYLDGS 71

Query: 444  LPGDFGFDPLGLSDPEGTGGFIEPRWLAYGEIINGRFAMLGAAGAIAPEILGKAGLIPPE 623
            LPGDFGFDPLGLSDPEGTGGFIEP+WLAYGEIINGR+AMLG AGAIAPEILGK GLIPPE
Sbjct: 72   LPGDFGFDPLGLSDPEGTGGFIEPKWLAYGEIINGRYAMLGVAGAIAPEILGKLGLIPPE 131

Query: 624  TALPWFQTGVIPPAGTYSYWADNYTLFVLEMALMGFAEHRRFQDWANPGSMGKQYFLGLE 803
            TALPWFQTGVIPPAGTYSYWAD YTLFVLEMALMGFAEHRRFQDWA PGSMGKQYFLG E
Sbjct: 132  TALPWFQTGVIPPAGTYSYWADPYTLFVLEMALMGFAEHRRFQDWAKPGSMGKQYFLGFE 191

Query: 804  KGLGGSGDPAYXXXXXXXXXXXXKDEKSMKELKLKEVKNGRLAMLAILGYFIQGLVTGVG 983
            K LGGSGDPAY            KDE+SMKELKLKEVKNGRLAMLAILG+FIQGLVTGVG
Sbjct: 192  KFLGGSGDPAYPGGPIFNPLGFGKDERSMKELKLKEVKNGRLAMLAILGFFIQGLVTGVG 251

Query: 984  PFQNLLDHLADPVNNNVLTSLKFH 1055
            PFQNLLDHLADPVNNNVLTSLKFH
Sbjct: 252  PFQNLLDHLADPVNNNVLTSLKFH 275


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