BLASTX nr result

ID: Scutellaria24_contig00001350 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001350
         (888 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycin...   160   4e-37
ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|2...   157   2e-36
ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protei...   157   2e-36
gb|AFK40678.1| unknown [Lotus japonicus]                              153   4e-35
ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitoch...   141   2e-31

>ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
           gi|255625921|gb|ACU13305.1| unknown [Glycine max]
          Length = 180

 Score =  160 bits (405), Expect = 4e-37
 Identities = 85/121 (70%), Positives = 99/121 (81%), Gaps = 4/121 (3%)
 Frame = +3

Query: 48  PTTPVYRPQKCNFSITSCL---NSPSSSQQKTRFNS-STRLYVSGLSFRTTEESLRNAFQ 215
           P++      K + S+ +CL   +S SSS  K  F S  T+LYVSGLSFRTTEESLRNAF+
Sbjct: 50  PSSSSILRNKASCSVLACLPPESSTSSSTAKPSFPSPQTKLYVSGLSFRTTEESLRNAFK 109

Query: 216 NFGELVEVNLVMDRIANRPRGFAFLRYTTEEDSKKAIEGMHGKFLDGRVIFVEIAKPRAK 395
           NFG+LVEV LVMDRIANRPRGFAFLRY TEE+S+KAIEGMHGKFLDGRVIFVE+AKPR++
Sbjct: 110 NFGQLVEVKLVMDRIANRPRGFAFLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSE 169

Query: 396 L 398
           L
Sbjct: 170 L 170


>ref|XP_002318331.1| predicted protein [Populus trichocarpa] gi|222859004|gb|EEE96551.1|
           predicted protein [Populus trichocarpa]
          Length = 181

 Score =  157 bits (398), Expect = 2e-36
 Identities = 78/105 (74%), Positives = 92/105 (87%), Gaps = 1/105 (0%)
 Frame = +3

Query: 87  SITSCLNSPSSSQQKTRFN-SSTRLYVSGLSFRTTEESLRNAFQNFGELVEVNLVMDRIA 263
           S+ +CL S +SS     FN   T+LYVSGLSFRTTEESLRNAFQNFG+LV+VNLVMD++A
Sbjct: 68  SVLACLPSSASSPSSFGFNFRKTKLYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVA 127

Query: 264 NRPRGFAFLRYTTEEDSKKAIEGMHGKFLDGRVIFVEIAKPRAKL 398
            RPRGFAFLRY TEE+++KAIEGMHGKFLDGRVIFVE+AKPR++L
Sbjct: 128 KRPRGFAFLRYETEEEAQKAIEGMHGKFLDGRVIFVEVAKPRSEL 172


>ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
           gi|296088019|emb|CBI35302.3| unnamed protein product
           [Vitis vinifera]
          Length = 170

 Score =  157 bits (398), Expect = 2e-36
 Identities = 86/123 (69%), Positives = 102/123 (82%), Gaps = 2/123 (1%)
 Frame = +3

Query: 57  PVYRPQKCN--FSITSCLNSPSSSQQKTRFNSSTRLYVSGLSFRTTEESLRNAFQNFGEL 230
           P  RP+  N  F++ +CL  PSS  Q +     TRLYVSGLSFRTTEESLRNAF+ FG+L
Sbjct: 51  PFNRPRNGNDLFAV-ACL--PSSPNQPSI--PKTRLYVSGLSFRTTEESLRNAFETFGQL 105

Query: 231 VEVNLVMDRIANRPRGFAFLRYTTEEDSKKAIEGMHGKFLDGRVIFVEIAKPRAKLDKN* 410
           VEVNLVMD+IANRPRGFAFLRY+TEE+S+KAIEGMHGKFLDGRVIFVE+AKPR++L +N 
Sbjct: 106 VEVNLVMDKIANRPRGFAFLRYSTEEESEKAIEGMHGKFLDGRVIFVEVAKPRSELRQNQ 165

Query: 411 SSR 419
           + R
Sbjct: 166 NQR 168


>gb|AFK40678.1| unknown [Lotus japonicus]
          Length = 187

 Score =  153 bits (387), Expect = 4e-35
 Identities = 75/98 (76%), Positives = 88/98 (89%)
 Frame = +3

Query: 105 NSPSSSQQKTRFNSSTRLYVSGLSFRTTEESLRNAFQNFGELVEVNLVMDRIANRPRGFA 284
           +S S S + +    STRLYVSGLSFRTTEESLRN F+NFG+LV+VNLVMD++ANRPRGFA
Sbjct: 79  SSSSPSAKPSSSAPSTRLYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFA 138

Query: 285 FLRYTTEEDSKKAIEGMHGKFLDGRVIFVEIAKPRAKL 398
           FLRY TEE+S+KAIEGMHGKFLDGRVIFVE+AKPR++L
Sbjct: 139 FLRYATEEESQKAIEGMHGKFLDGRVIFVEVAKPRSEL 176


>ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
           sativus]
          Length = 175

 Score =  141 bits (355), Expect = 2e-31
 Identities = 72/105 (68%), Positives = 86/105 (81%)
 Frame = +3

Query: 84  FSITSCLNSPSSSQQKTRFNSSTRLYVSGLSFRTTEESLRNAFQNFGELVEVNLVMDRIA 263
           FS+    +SPSSS    R+  STRLY+SGLSFRTTEESLRNAF++FG+LVEVNLVMDR+A
Sbjct: 67  FSVACVSSSPSSSSSPRRYTPSTRLYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLA 126

Query: 264 NRPRGFAFLRYTTEEDSKKAIEGMHGKFLDGRVIFVEIAKPRAKL 398
           NRPRGFAFLRY +EE+S+KAIEGMHGK       FVE+AK R++L
Sbjct: 127 NRPRGFAFLRYASEEESQKAIEGMHGK-----GDFVEVAKSRSEL 166


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