BLASTX nr result

ID: Scutellaria24_contig00001328 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001328
         (1582 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12...   592   e-167
emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]   584   e-164
ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|2...   556   e-156
ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12...   553   e-155
ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12...   549   e-154

>ref|XP_002279575.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Vitis vinifera]
            gi|296082215|emb|CBI21220.3| unnamed protein product
            [Vitis vinifera]
          Length = 438

 Score =  592 bits (1527), Expect = e-167
 Identities = 279/393 (70%), Positives = 323/393 (82%), Gaps = 1/393 (0%)
 Frame = -3

Query: 1580 LTRFGLSALVNNLLQAGNVDWESEPFDFLIDGELVRMSLEEFLLAKDISAEKVLEIEYIK 1401
            LTR GLSA+VNNLL++GN DW+ EPFDFLIDGELVRMSLE+FL+AK ISAEK+LEIEYIK
Sbjct: 39   LTRMGLSAIVNNLLKSGNPDWKPEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIEYIK 98

Query: 1400 AIAPRKEEEPSLHDDWVSAVDGSNDGYILTGCYDGFGRIWKAAGVCTHVLDGHSGPVTSV 1221
            A+APRK+EEPSLHDDWVSAVDGSN G+ILTGCYDG GR+WKAAG CTH+L+GH+  +TSV
Sbjct: 99   AVAPRKQEEPSLHDDWVSAVDGSNPGFILTGCYDGLGRLWKAAGSCTHILEGHNDAITSV 158

Query: 1220 CSLMPKA-EVFSDQIVATASKDRTLRLWKFGEEEGSVGQPNKIQSFKILRGHTGAVQSIA 1044
              + PK  E  ++ +VATASKDRTLRLWKF   E     P KI++FKIL GH  +VQS+A
Sbjct: 159  KFIDPKGLESVNNSVVATASKDRTLRLWKFDAGERH-DLPLKIRAFKILHGHNASVQSVA 217

Query: 1043 AAPSSDKVCSGSWDCTINLWNISASDMDDGTISVKKRKKXXXXXXXXXXXEAHTTLVGHT 864
              P+ + VCSGSWDCTINLW     D++   +SVKKRK            EA +T+VGHT
Sbjct: 218  VQPTGNMVCSGSWDCTINLWRTDEFDVEGDLVSVKKRKVNNEAEESQAEGEAVSTIVGHT 277

Query: 863  QCVSSVIWPEDRTIYSASWDHSIRSWDVLTGKVSLSMSCGKVINCLDIGGESSALIAGGG 684
            QCVSSVIWP+  TIYSASWDHS+R WDV TGK S ++ CGK +NCLD+GGESSALIA GG
Sbjct: 278  QCVSSVIWPQHETIYSASWDHSVRRWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGG 337

Query: 683  SDPVLRIWDPRRPGTLSPIFQFSSHNSWISSCKWHRKSWFHVVSASYDGKVMLWDLRTAW 504
            SD  LRIWDPR+PGTL+P+FQFSSH SWIS+CKWH KSWFH++SASYDGKVMLWDLRTAW
Sbjct: 338  SDTTLRIWDPRKPGTLTPVFQFSSHTSWISACKWHNKSWFHLLSASYDGKVMLWDLRTAW 397

Query: 503  PLAVIDSHKDKVLCADWWKDDSVISGGVDSKLC 405
            PLAVIDSH +KVLCADWWK DSV+SGG DSKLC
Sbjct: 398  PLAVIDSHNNKVLCADWWKGDSVVSGGADSKLC 430


>emb|CAN70824.1| hypothetical protein VITISV_042345 [Vitis vinifera]
          Length = 427

 Score =  584 bits (1506), Expect = e-164
 Identities = 276/392 (70%), Positives = 320/392 (81%)
 Frame = -3

Query: 1580 LTRFGLSALVNNLLQAGNVDWESEPFDFLIDGELVRMSLEEFLLAKDISAEKVLEIEYIK 1401
            LTR GLSA+VNNLL++GN DW+ EPFDFLIDGELVRMSLE+FL+AK ISAEK+LEIEYIK
Sbjct: 39   LTRMGLSAIVNNLLKSGNPDWKPEPFDFLIDGELVRMSLEQFLIAKGISAEKILEIEYIK 98

Query: 1400 AIAPRKEEEPSLHDDWVSAVDGSNDGYILTGCYDGFGRIWKAAGVCTHVLDGHSGPVTSV 1221
            A+APRK+EEPSLHDDWVSAVDGSN G+ILTGCYDG GR+WKAAG CTH+L+GH+  +TSV
Sbjct: 99   AVAPRKQEEPSLHDDWVSAVDGSNPGFILTGCYDGLGRLWKAAGSCTHILEGHNDAITSV 158

Query: 1220 CSLMPKAEVFSDQIVATASKDRTLRLWKFGEEEGSVGQPNKIQSFKILRGHTGAVQSIAA 1041
              + PK       +VATASKDRTLRLWK      ++  P KI++FKIL GH  +VQS+A 
Sbjct: 159  KFIDPK-------VVATASKDRTLRLWK----GSAMIFPLKIRAFKILHGHNASVQSVAV 207

Query: 1040 APSSDKVCSGSWDCTINLWNISASDMDDGTISVKKRKKXXXXXXXXXXXEAHTTLVGHTQ 861
             P+ + VCSGSWDCTINLW     D++   +SVKKRK            EA +T+VGHTQ
Sbjct: 208  QPTGNMVCSGSWDCTINLWRTDEFDVEGDLVSVKKRKVNNEAEESQAEGEAVSTIVGHTQ 267

Query: 860  CVSSVIWPEDRTIYSASWDHSIRSWDVLTGKVSLSMSCGKVINCLDIGGESSALIAGGGS 681
            CVSSVIWP+  TIYSASWDHS+R WDV TGK S ++ CGK +NCLD+GGESSALIA GGS
Sbjct: 268  CVSSVIWPQHETIYSASWDHSVRRWDVETGKDSWNLFCGKALNCLDVGGESSALIAAGGS 327

Query: 680  DPVLRIWDPRRPGTLSPIFQFSSHNSWISSCKWHRKSWFHVVSASYDGKVMLWDLRTAWP 501
            D  LRIWDPR+PGTL+P+FQFSSH SWIS+CKWH KSWFH++SASYDGKVMLWDLRTAWP
Sbjct: 328  DTTLRIWDPRKPGTLTPVFQFSSHTSWISACKWHNKSWFHLLSASYDGKVMLWDLRTAWP 387

Query: 500  LAVIDSHKDKVLCADWWKDDSVISGGVDSKLC 405
            LAVIDSH +KVLCADWWK DSV+SGG DSKLC
Sbjct: 388  LAVIDSHNNKVLCADWWKGDSVVSGGADSKLC 419


>ref|XP_002324109.1| predicted protein [Populus trichocarpa] gi|222867111|gb|EEF04242.1|
            predicted protein [Populus trichocarpa]
          Length = 433

 Score =  556 bits (1432), Expect = e-156
 Identities = 263/391 (67%), Positives = 311/391 (79%)
 Frame = -3

Query: 1580 LTRFGLSALVNNLLQAGNVDWESEPFDFLIDGELVRMSLEEFLLAKDISAEKVLEIEYIK 1401
            LTR GLS +VN+LL+AG+ +WES+PFDFLIDGELVR+ LE+FLLAK ISAEKVLEIEY +
Sbjct: 37   LTRLGLSTIVNSLLKAGDDEWESQPFDFLIDGELVRLPLEQFLLAKGISAEKVLEIEYTR 96

Query: 1400 AIAPRKEEEPSLHDDWVSAVDGSNDGYILTGCYDGFGRIWKAAGVCTHVLDGHSGPVTSV 1221
            A+  +KE+EPSLHDDWVSAVDGS   +ILTGCYD  GR+WKAAG CTH+L+GH G +TSV
Sbjct: 97   AVVLQKEDEPSLHDDWVSAVDGSCPRFILTGCYDNLGRVWKAAGECTHILEGHGGAITSV 156

Query: 1220 CSLMPKAEVFSDQIVATASKDRTLRLWKFGEEEGSVGQPNKIQSFKILRGHTGAVQSIAA 1041
              +   +E      VATASKD TLRLWKF  EE  + QP+KI++FKILRGH   VQS+AA
Sbjct: 157  SVV--NSEGTDSVTVATASKDETLRLWKFDTEE-HLDQPSKIRAFKILRGHNAPVQSVAA 213

Query: 1040 APSSDKVCSGSWDCTINLWNISASDMDDGTISVKKRKKXXXXXXXXXXXEAHTTLVGHTQ 861
              S   +CSGSWDCTINLW  + SD +   +S+KKRK             A +TLVGHTQ
Sbjct: 214  EASGSMICSGSWDCTINLWRTNESDTESDLVSIKKRKVKNKAGESQLEGGALSTLVGHTQ 273

Query: 860  CVSSVIWPEDRTIYSASWDHSIRSWDVLTGKVSLSMSCGKVINCLDIGGESSALIAGGGS 681
            CVSSV WPE  TIYSASWDHS+R WDV  GK   ++ CGK ++CL +GGE SALIA GGS
Sbjct: 274  CVSSVYWPEPNTIYSASWDHSVRRWDVEMGKDLSNIFCGKALHCLHVGGEGSALIAAGGS 333

Query: 680  DPVLRIWDPRRPGTLSPIFQFSSHNSWISSCKWHRKSWFHVVSASYDGKVMLWDLRTAWP 501
            DP+LR+WDPR+PGT +PI+QFSSHNSWIS+CKWH +S FH++SASYDGK+MLWDLRTAWP
Sbjct: 334  DPILRVWDPRKPGTSAPIYQFSSHNSWISACKWHSESLFHLLSASYDGKLMLWDLRTAWP 393

Query: 500  LAVIDSHKDKVLCADWWKDDSVISGGVDSKL 408
            LA+IDSH+DKVLCADWWK DSVISGGVDSKL
Sbjct: 394  LAIIDSHEDKVLCADWWKGDSVISGGVDSKL 424


>ref|XP_003554839.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Glycine max]
          Length = 435

 Score =  553 bits (1425), Expect = e-155
 Identities = 263/392 (67%), Positives = 309/392 (78%)
 Frame = -3

Query: 1580 LTRFGLSALVNNLLQAGNVDWESEPFDFLIDGELVRMSLEEFLLAKDISAEKVLEIEYIK 1401
            L RFGLS+LVN LLQ+ + D + EPFDFLIDGE VRMSLE+FLLAK ISAE++LEIEY +
Sbjct: 40   LARFGLSSLVNALLQSNDADHQLEPFDFLIDGEFVRMSLEQFLLAKGISAERILEIEYTR 99

Query: 1400 AIAPRKEEEPSLHDDWVSAVDGSNDGYILTGCYDGFGRIWKAAGVCTHVLDGHSGPVTSV 1221
            A+APRKEE+PSLHDDWVSAVDGS+  + LTGCYDG GR+WK AG+CTH+L+GHS  VTSV
Sbjct: 100  AVAPRKEEDPSLHDDWVSAVDGSSSRFFLTGCYDGLGRVWKGAGLCTHILEGHSDAVTSV 159

Query: 1220 CSLMPKAEVFSDQIVATASKDRTLRLWKFGEEEGSVGQPNKIQSFKILRGHTGAVQSIAA 1041
              + PK E      VATASKDRTLRLWK   E G V  P +++++KI RGH  +V  +AA
Sbjct: 160  SIINPKGE--ETITVATASKDRTLRLWKLNAE-GPVNNPMRVRAYKIFRGHKSSVNCVAA 216

Query: 1040 APSSDKVCSGSWDCTINLWNISASDMDDGTISVKKRKKXXXXXXXXXXXEAHTTLVGHTQ 861
              S + VCS SWDCTINLW  +  + +D  +S KKRK            EA TTLVGHTQ
Sbjct: 217  QTSGEMVCSASWDCTINLWQTNDFNAEDDLVS-KKRKIGAQVEESQLEGEAFTTLVGHTQ 275

Query: 860  CVSSVIWPEDRTIYSASWDHSIRSWDVLTGKVSLSMSCGKVINCLDIGGESSALIAGGGS 681
            CVS+V+WP+  +IYSASWDHSIR WDV TGK    + CGKV+NCLDIGGE SALIA GGS
Sbjct: 276  CVSAVVWPQQESIYSASWDHSIRKWDVETGKNLTDLFCGKVLNCLDIGGEGSALIAAGGS 335

Query: 680  DPVLRIWDPRRPGTLSPIFQFSSHNSWISSCKWHRKSWFHVVSASYDGKVMLWDLRTAWP 501
            DPV+RIWDPR+PGT +P+FQFSSH SWIS+CKWH +SWFH++SASYDGKVMLWDLRTAWP
Sbjct: 336  DPVIRIWDPRKPGTSAPVFQFSSHTSWISACKWHDQSWFHLLSASYDGKVMLWDLRTAWP 395

Query: 500  LAVIDSHKDKVLCADWWKDDSVISGGVDSKLC 405
            L+VI+SH DKVL ADWWK +SVISGG DSKLC
Sbjct: 396  LSVIESHSDKVLSADWWKSNSVISGGADSKLC 427


>ref|XP_004149101.1| PREDICTED: ribosome biogenesis protein WDR12 homolog [Cucumis
            sativus]
          Length = 434

 Score =  549 bits (1414), Expect = e-154
 Identities = 258/391 (65%), Positives = 307/391 (78%)
 Frame = -3

Query: 1580 LTRFGLSALVNNLLQAGNVDWESEPFDFLIDGELVRMSLEEFLLAKDISAEKVLEIEYIK 1401
            LTR GLS +VNNLL AGN +WE EPFDFLIDGELVRMSLE+FLLAK ISAEK LEIEY K
Sbjct: 39   LTRLGLSTVVNNLLSAGNPEWEEEPFDFLIDGELVRMSLEKFLLAKGISAEKTLEIEYFK 98

Query: 1400 AIAPRKEEEPSLHDDWVSAVDGSNDGYILTGCYDGFGRIWKAAGVCTHVLDGHSGPVTSV 1221
            A+APR+EEEPS+HDDWVSAVDGS  G+ILTGCYDGFGR+W++AG+CTH+L+GHS  ++SV
Sbjct: 99   AVAPRREEEPSVHDDWVSAVDGSCPGFILTGCYDGFGRVWESAGLCTHILEGHSDAISSV 158

Query: 1220 CSLMPKAEVFSDQIVATASKDRTLRLWKFGEEEGSVGQPNKIQSFKILRGHTGAVQSIAA 1041
            C + P     ++  +ATASKDRT+RLWK+ +++  V  P K++ FKIL+GH  +VQS+A+
Sbjct: 159  CIVNPGEA--TNVTLATASKDRTIRLWKYSKDD-RVKNPTKLRPFKILKGHRLSVQSVAS 215

Query: 1040 APSSDKVCSGSWDCTINLWNISASDMDDGTISVKKRKKXXXXXXXXXXXEAHTTLVGHTQ 861
              S   +CSGSWD TI LW        +G +S+KKRKK           ++  TL GH+Q
Sbjct: 216  QKSGHLICSGSWDHTIKLWRTD-EHQSEGDVSIKKRKKNTQAEESQLEEDSVATLDGHSQ 274

Query: 860  CVSSVIWPEDRTIYSASWDHSIRSWDVLTGKVSLSMSCGKVINCLDIGGESSALIAGGGS 681
             VSSV WP+   IYS SWDHS+R WDV TG V  +  CGK +NCLDIGGE S+LIA GGS
Sbjct: 275  SVSSVAWPKHEEIYSVSWDHSVRRWDVETGNVLFNHVCGKALNCLDIGGEGSSLIAAGGS 334

Query: 680  DPVLRIWDPRRPGTLSPIFQFSSHNSWISSCKWHRKSWFHVVSASYDGKVMLWDLRTAWP 501
            DP +RIWDPR+PGT SPIFQFSSH SW+S CKWH KSWFH++SASYDGKVMLWDLRTAWP
Sbjct: 335  DPTIRIWDPRKPGTSSPIFQFSSHTSWVSDCKWHDKSWFHLLSASYDGKVMLWDLRTAWP 394

Query: 500  LAVIDSHKDKVLCADWWKDDSVISGGVDSKL 408
            LAVIDSH DKVL ADWWKDDS++SGG DSKL
Sbjct: 395  LAVIDSHNDKVLSADWWKDDSIVSGGADSKL 425


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