BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001242
         (1954 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29086.3| unnamed protein product [Vitis vinifera]              331   4e-88
ref|XP_002271166.1| PREDICTED: uncharacterized protein LOC100264...   331   4e-88
ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23...   317   1e-83
ref|XP_002529115.1| uv excision repair protein rad23, putative [...   316   2e-83
ref|NP_198663.1| putative DNA repair protein RAD23-4 [Arabidopsi...   312   2e-82

>emb|CBI29086.3| unnamed protein product [Vitis vinifera]
          Length = 962

 Score =  331 bits (849), Expect = 4e-88
 Identities = 156/257 (60%), Positives = 194/257 (75%)
 Frame = -2

Query: 1953 FKAIWYPRIGKWEHALRTLPIASQETCAAMEFYHKQLKLRLLNEKDQSVYQRVDWLVNKL 1774
            FKAIWYPR+G W  AL+TLP+ASQETCAAMEFYH QLKLRLLNEK+ SVYQR DWL++KL
Sbjct: 502  FKAIWYPRMGVWISALQTLPLASQETCAAMEFYHNQLKLRLLNEKEPSVYQRADWLIDKL 561

Query: 1773 NTKVHSYFWLDEYSGKEDFARYRKDEWMSGLTAWRRSLKIPDAHVVMDGKYAKVYGMDDH 1594
             TKVHSYFWLDEYSGK+DF+RY +DEW+SGLT+WR++LKIPD+ VV++ ++AKV    D 
Sbjct: 562  GTKVHSYFWLDEYSGKDDFSRYWRDEWVSGLTSWRKALKIPDSDVVLERRFAKVIDQQDQ 621

Query: 1593 DTTHLVRNPGSEYSICDCSWAKLGNLCEHVFKTIKFCRDKGFTTPSTTMFQYGQALINIL 1414
            D  H+V NPGSEY+ICDC WA++GNLCEHVFK I  CR+ G +  S ++FQY QALIN+L
Sbjct: 622  DRAHIVWNPGSEYAICDCGWAEMGNLCEHVFKVISVCRNNGSSMSSISLFQYKQALINML 681

Query: 1413 RSPPFDSLASDHAVSLAIWVQMQLNLPIDPESSQDKGNALEQQTPEPSMGSTDKAPENVN 1234
              PP DSL  DHAVSLA+ VQ+QLN  +DPESSQ   +  +QQ    +     +     +
Sbjct: 682  NCPPNDSLIRDHAVSLAVHVQIQLNTLVDPESSQTIVDVNKQQHNGVASADQQRDIVQES 741

Query: 1233 HCPDKAVSDQAETQSMV 1183
            +CP + VS   E+   V
Sbjct: 742  NCPKENVSSSRESGDSV 758


>ref|XP_002271166.1| PREDICTED: uncharacterized protein LOC100264354 [Vitis vinifera]
          Length = 965

 Score =  331 bits (849), Expect = 4e-88
 Identities = 156/257 (60%), Positives = 194/257 (75%)
 Frame = -2

Query: 1953 FKAIWYPRIGKWEHALRTLPIASQETCAAMEFYHKQLKLRLLNEKDQSVYQRVDWLVNKL 1774
            FKAIWYPR+G W  AL+TLP+ASQETCAAMEFYH QLKLRLLNEK+ SVYQR DWL++KL
Sbjct: 448  FKAIWYPRMGVWISALQTLPLASQETCAAMEFYHNQLKLRLLNEKEPSVYQRADWLIDKL 507

Query: 1773 NTKVHSYFWLDEYSGKEDFARYRKDEWMSGLTAWRRSLKIPDAHVVMDGKYAKVYGMDDH 1594
             TKVHSYFWLDEYSGK+DF+RY +DEW+SGLT+WR++LKIPD+ VV++ ++AKV    D 
Sbjct: 508  GTKVHSYFWLDEYSGKDDFSRYWRDEWVSGLTSWRKALKIPDSDVVLERRFAKVIDQQDQ 567

Query: 1593 DTTHLVRNPGSEYSICDCSWAKLGNLCEHVFKTIKFCRDKGFTTPSTTMFQYGQALINIL 1414
            D  H+V NPGSEY+ICDC WA++GNLCEHVFK I  CR+ G +  S ++FQY QALIN+L
Sbjct: 568  DRAHIVWNPGSEYAICDCGWAEMGNLCEHVFKVISVCRNNGSSMSSISLFQYKQALINML 627

Query: 1413 RSPPFDSLASDHAVSLAIWVQMQLNLPIDPESSQDKGNALEQQTPEPSMGSTDKAPENVN 1234
              PP DSL  DHAVSLA+ VQ+QLN  +DPESSQ   +  +QQ    +     +     +
Sbjct: 628  NCPPNDSLIRDHAVSLAVHVQIQLNTLVDPESSQTIVDVNKQQHNGVASADQQRDIVQES 687

Query: 1233 HCPDKAVSDQAETQSMV 1183
            +CP + VS   E+   V
Sbjct: 688  NCPKENVSSSRESGDSV 704


>ref|XP_002283656.1| PREDICTED: putative DNA repair protein RAD23-3 isoform 1 [Vitis
            vinifera] gi|296087286|emb|CBI33660.3| unnamed protein
            product [Vitis vinifera]
          Length = 381

 Score =  317 bits (811), Expect = 1e-83
 Identities = 176/257 (68%), Positives = 188/257 (73%)
 Frame = -2

Query: 1086 SDVSDVYGVAASNLVAGNNLEGTIQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYS 907
            S  SD+YG AASNLVAGNNLE TIQQILDMGGGSWDRDTVVRALRAA+NNPERAVEYLYS
Sbjct: 135  SSDSDIYGQAASNLVAGNNLEVTIQQILDMGGGSWDRDTVVRALRAAYNNPERAVEYLYS 194

Query: 906  GIXXXXXXXXXXXPLIGNIIGEQAANIXXXXXXXXXXXXPSTGPNANPLDLFPQXXXXXX 727
            GI           P    +    A N+             S+GPNANPLDLFPQ      
Sbjct: 195  GIPEQAEGPPAARPPASGL----AVNLPTQAPQGPQTTVASSGPNANPLDLFPQ--GLPS 248

Query: 726  XXXXXXXNTLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLR 547
                    TLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNP L+RLIQEHQADFLR
Sbjct: 249  MGSNASAGTLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPHLMRLIQEHQADFLR 308

Query: 546  LVXXXXXXXXXXXXILGQLAGAAPQAIAVTPEEREAIERLEAMGFDRELVLEVFFACNKN 367
            L+            +LGQL G  PQA+ +TPEERE+IERLEAMGFDR LVLEVFFACNKN
Sbjct: 309  LI---NEPVEGEGNVLGQL-GTVPQAVTITPEERESIERLEAMGFDRALVLEVFFACNKN 364

Query: 366  EELAANYLLDHMHEFED 316
            EELAANYLLDHMHEFE+
Sbjct: 365  EELAANYLLDHMHEFEE 381


>ref|XP_002529115.1| uv excision repair protein rad23, putative [Ricinus communis]
            gi|223531394|gb|EEF33228.1| uv excision repair protein
            rad23, putative [Ricinus communis]
          Length = 409

 Score =  316 bits (809), Expect = 2e-83
 Identities = 176/256 (68%), Positives = 184/256 (71%), Gaps = 3/256 (1%)
 Frame = -2

Query: 1074 DVYGVAASNLVAGNNLEGTIQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIXX 895
            DVYG AASNLVAGNNLEG IQQILDMGGG+WDRDTVVRALRAA+NNPERAVEYLYSGI  
Sbjct: 159  DVYGQAASNLVAGNNLEGAIQQILDMGGGTWDRDTVVRALRAAYNNPERAVEYLYSGIPE 218

Query: 894  XXXXXXXXXPLIGNIIGEQAANIXXXXXXXXXXXXPSTGPNANPLDLFPQXXXXXXXXXX 715
                         ++ G+ A               PS GPNANPLDLFPQ          
Sbjct: 219  QAEVPPVAPV---SLSGQAANQPAQPQQPAQPAAVPSGGPNANPLDLFPQGLPNMGSGGA 275

Query: 714  XXXN---TLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRL 544
                   TLDFLRNS QFQALRAMVQANPQILQPMLQELGKQNP LVRLIQEHQ DFLRL
Sbjct: 276  GAGAGAGTLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPNLVRLIQEHQTDFLRL 335

Query: 543  VXXXXXXXXXXXXILGQLAGAAPQAIAVTPEEREAIERLEAMGFDRELVLEVFFACNKNE 364
            +             +GQLA A PQA+ VTPEEREAIERLEAMGFDR LVLEVFFACNKNE
Sbjct: 336  INEPVEGGEGNI--MGQLAAAMPQAVTVTPEEREAIERLEAMGFDRGLVLEVFFACNKNE 393

Query: 363  ELAANYLLDHMHEFED 316
            ELAANYLLDHMHEFED
Sbjct: 394  ELAANYLLDHMHEFED 409


>ref|NP_198663.1| putative DNA repair protein RAD23-4 [Arabidopsis thaliana]
            gi|55976502|sp|Q84L30.2|RD23D_ARATH RecName:
            Full=Putative DNA repair protein RAD23-4; AltName:
            Full=RAD23-like protein 4; Short=AtRAD23-4
            gi|9758825|dbj|BAB09359.1| DNA repair protein RAD23
            homolog [Arabidopsis thaliana] gi|16648838|gb|AAL25609.1|
            unknown protein [Arabidopsis thaliana]
            gi|19548081|gb|AAL87405.1| At5g38470/At5g38470
            [Arabidopsis thaliana] gi|21593157|gb|AAM65106.1| DNA
            repair protein RAD23 homolog [Arabidopsis thaliana]
            gi|30409728|dbj|BAC76394.1| RAD23-like protein
            [Arabidopsis thaliana] gi|110735094|gb|ABG89117.1|
            Rad23-2 [synthetic construct] gi|332006938|gb|AED94321.1|
            putative DNA repair protein RAD23-4 [Arabidopsis
            thaliana]
          Length = 378

 Score =  312 bits (800), Expect = 2e-82
 Identities = 173/254 (68%), Positives = 182/254 (71%)
 Frame = -2

Query: 1077 SDVYGVAASNLVAGNNLEGTIQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIX 898
            +DVYG AASNLVAG  LE T+QQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGI 
Sbjct: 132  TDVYGQAASNLVAGTTLESTVQQILDMGGGSWDRDTVVRALRAAFNNPERAVEYLYSGIP 191

Query: 897  XXXXXXXXXXPLIGNIIGEQAANIXXXXXXXXXXXXPSTGPNANPLDLFPQXXXXXXXXX 718
                             GEQAAN              + GPNANPL+LFPQ         
Sbjct: 192  AQAEIPPVAQ---APATGEQAANPLAQPQQAAAPAAATGGPNANPLNLFPQ--GMPAADA 246

Query: 717  XXXXNTLDFLRNSPQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLVX 538
                  LDFLRNS QFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRL+ 
Sbjct: 247  GAGAGNLDFLRNSQQFQALRAMVQANPQILQPMLQELGKQNPQLVRLIQEHQADFLRLI- 305

Query: 537  XXXXXXXXXXXILGQLAGAAPQAIAVTPEEREAIERLEAMGFDRELVLEVFFACNKNEEL 358
                       ++ QL  A PQA+ VTPEEREAIERLE MGFDR +VLEVFFACNKNEEL
Sbjct: 306  --NEPVEGEENVMEQLEAAMPQAVTVTPEEREAIERLEGMGFDRAMVLEVFFACNKNEEL 363

Query: 357  AANYLLDHMHEFED 316
            AANYLLDHMHEFED
Sbjct: 364  AANYLLDHMHEFED 377