BLASTX nr result

ID: Scutellaria24_contig00001139 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001139
         (871 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318822.1| predicted protein [Populus trichocarpa] gi|2...   182   7e-44
ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus...   182   1e-43
ref|XP_002305219.1| predicted protein [Populus trichocarpa] gi|1...   181   1e-43
ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [C...   181   3e-43
gb|AFK40850.1| unknown [Medicago truncatula]                          181   3e-43

>ref|XP_002318822.1| predicted protein [Populus trichocarpa]
           gi|224147380|ref|XP_002336467.1| predicted protein
           [Populus trichocarpa] gi|118481582|gb|ABK92733.1|
           unknown [Populus trichocarpa]
           gi|222835080|gb|EEE73529.1| predicted protein [Populus
           trichocarpa] gi|222859495|gb|EEE97042.1| predicted
           protein [Populus trichocarpa]
          Length = 163

 Score =  182 bits (463), Expect = 7e-44
 Identities = 100/144 (69%), Positives = 106/144 (73%), Gaps = 1/144 (0%)
 Frame = -3

Query: 821 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYRKQ 642
           MVLKTELCRFSGAKIYPG+GIRFIRSDSQVFLFANSKCKRYFHNRL+P+KLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 641 HXXXXXXXXXXXXXXXXXKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALXXXXXXXX 462
           H                 KPYSRSIVGATLEVIQKKR+EKPEVRDAAREAAL        
Sbjct: 61  HKKDIAAETIKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIK 120

Query: 461 XXXXXXXXXXXEVTSK-QKSSKAN 393
                      EVT+K QKSSK +
Sbjct: 121 KTKDEKRAKKAEVTAKVQKSSKGS 144


>ref|XP_002528634.1| 60S ribosomal protein L24, putative [Ricinus communis]
           gi|223531923|gb|EEF33737.1| 60S ribosomal protein L24,
           putative [Ricinus communis]
          Length = 186

 Score =  182 bits (461), Expect = 1e-43
 Identities = 92/114 (80%), Positives = 97/114 (85%)
 Frame = -3

Query: 827 AAMVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYR 648
           AAMVLKTELCRFSGAKIYPG+GIRFIRSDSQVFLFANSKCKRYFHNRL+P+KLTWTAMYR
Sbjct: 21  AAMVLKTELCRFSGAKIYPGKGIRFIRSDSQVFLFANSKCKRYFHNRLKPSKLTWTAMYR 80

Query: 647 KQHXXXXXXXXXXXXXXXXXKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAAL 486
           KQH                 KPYSRSIVGATLEVIQK+R+EKPEVRDAAREAAL
Sbjct: 81  KQHKKDIAQEAVKKRRRTTKKPYSRSIVGATLEVIQKRRTEKPEVRDAAREAAL 134


>ref|XP_002305219.1| predicted protein [Populus trichocarpa] gi|118487980|gb|ABK95811.1|
           unknown [Populus trichocarpa]
           gi|222848183|gb|EEE85730.1| predicted protein [Populus
           trichocarpa]
          Length = 163

 Score =  181 bits (460), Expect = 1e-43
 Identities = 100/144 (69%), Positives = 105/144 (72%), Gaps = 1/144 (0%)
 Frame = -3

Query: 821 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYRKQ 642
           MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHN+L+P+KLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 641 HXXXXXXXXXXXXXXXXXKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALXXXXXXXX 462
           H                 KPYSRSIVGATLEVIQKKR+EKPEVRDAAREAAL        
Sbjct: 61  HKKDIAAETVKKRRRTTKKPYSRSIVGATLEVIQKKRAEKPEVRDAAREAALREIKERIK 120

Query: 461 XXXXXXXXXXXEVTSK-QKSSKAN 393
                      EV SK QKSSK +
Sbjct: 121 KTKDEKKAKKAEVMSKAQKSSKGS 144


>ref|XP_004143295.1| PREDICTED: 60S ribosomal protein L24-like [Cucumis sativus]
           gi|449523211|ref|XP_004168617.1| PREDICTED: 60S
           ribosomal protein L24-like [Cucumis sativus]
          Length = 164

 Score =  181 bits (458), Expect = 3e-43
 Identities = 91/112 (81%), Positives = 95/112 (84%)
 Frame = -3

Query: 821 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYRKQ 642
           MVLKTELCRFSGAKIYPGRGIRF+R+DSQVFLFANSKCKRYFHNRL+P+KLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFVRADSQVFLFANSKCKRYFHNRLKPSKLTWTAMYRKQ 60

Query: 641 HXXXXXXXXXXXXXXXXXKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAAL 486
           H                 KPYSRSIVGATLEVIQKKRSEKPEVRDAAREAAL
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAAL 112


>gb|AFK40850.1| unknown [Medicago truncatula]
          Length = 163

 Score =  181 bits (458), Expect = 3e-43
 Identities = 99/144 (68%), Positives = 103/144 (71%), Gaps = 1/144 (0%)
 Frame = -3

Query: 821 MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFANSKCKRYFHNRLRPAKLTWTAMYRKQ 642
           MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLF NSKCKRYFHN+L+P+KLTWTAMYRKQ
Sbjct: 1   MVLKTELCRFSGAKIYPGRGIRFIRSDSQVFLFVNSKCKRYFHNKLKPSKLTWTAMYRKQ 60

Query: 641 HXXXXXXXXXXXXXXXXXKPYSRSIVGATLEVIQKKRSEKPEVRDAAREAALXXXXXXXX 462
           H                 KPYSRSIVGATLEVIQKKR+EKPEVRDAAREAAL        
Sbjct: 61  HKKDIAQEAVKKRRRATKKPYSRSIVGATLEVIQKKRTEKPEVRDAAREAALREIKERIK 120

Query: 461 XXXXXXXXXXXEVTSK-QKSSKAN 393
                      EV SK QKS K N
Sbjct: 121 KTKDEKKAKKAEVASKAQKSGKGN 144


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