BLASTX nr result

ID: Scutellaria24_contig00001100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00001100
         (1330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306558.1| predicted protein [Populus trichocarpa] gi|2...   218   4e-54
ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   216   1e-53
emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]   216   1e-53
ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arab...   214   5e-53
ref|NP_192643.2| RNA recognition motif-containing protein [Arabi...   211   3e-52

>ref|XP_002306558.1| predicted protein [Populus trichocarpa] gi|222856007|gb|EEE93554.1|
            predicted protein [Populus trichocarpa]
          Length = 309

 Score =  218 bits (554), Expect = 4e-54
 Identities = 115/221 (52%), Positives = 145/221 (65%), Gaps = 5/221 (2%)
 Frame = +2

Query: 410  PVVQSES-----TEEKIAVEPEEEDVSNTRLLVQNVPWTCTANDIRPLLKKYGNVVHIEF 574
            PVV S S     TE +   E +EE+ S TRL   NVPW CTA DIR L +K+G VV +E 
Sbjct: 76   PVVDSSSLDDVVTEYQSKAEEKEEEFSKTRLFASNVPWNCTAEDIRALFQKFGTVVDVEL 135

Query: 575  AMYNKTKNRGLAFVTMGSHEEAAAALNALDSTEFEGRLLKVNWANXXXXXXXXXXXXXXX 754
            +MY+K +NRGLAFVTMGS EEA AALN L+S EFEGR LK+N+A                
Sbjct: 136  SMYSKIRNRGLAFVTMGSPEEAVAALNNLESYEFEGRTLKMNYAK-AKKKKPSPPPPPKP 194

Query: 755  XXVHNLFVANLPFEARAKDLKEFFNAENGKVVSAEVIFQDNPRRSAGYGFISFNTKXXXX 934
                NLFVANLPFEA++KDLKEFF AE   VVSAE+IF DNPRR +GYGF++F TK    
Sbjct: 195  GPTFNLFVANLPFEAKSKDLKEFFIAEGANVVSAEIIFHDNPRRPSGYGFVAFKTKKEAD 254

Query: 935  XXXXXFEEKEFMGRPLRLSRSKRFLREETKATIESESNAEE 1057
                 F +KEFMGR LR++RS++F+++  +   +S+  + E
Sbjct: 255  YAISTFSDKEFMGRQLRVARSRQFVKQRKEDAAQSDGTSGE 295


>ref|XP_002285735.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
            gi|302142004|emb|CBI19207.3| unnamed protein product
            [Vitis vinifera]
          Length = 294

 Score =  216 bits (549), Expect = 1e-53
 Identities = 107/198 (54%), Positives = 143/198 (72%)
 Frame = +2

Query: 458  EEEDVSNTRLLVQNVPWTCTANDIRPLLKKYGNVVHIEFAMYNKTKNRGLAFVTMGSHEE 637
            EEE+ S TRL+ QN+PWTCTA DIR L +KYG V+ +E +M+NKT+NRGLAF++MGS EE
Sbjct: 82   EEEEFSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEE 141

Query: 638  AAAALNALDSTEFEGRLLKVNWANXXXXXXXXXXXXXXXXXVHNLFVANLPFEARAKDLK 817
            A AAL+ L+S E EGR +KVN+AN                  +NLF+ANLP++ARAKDL+
Sbjct: 142  ALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTP-YNLFIANLPYQARAKDLR 200

Query: 818  EFFNAENGKVVSAEVIFQDNPRRSAGYGFISFNTKXXXXXXXXXFEEKEFMGRPLRLSRS 997
            EFF++ N  VVSAEVIF +NPRRS+GYGF+SF +K         F+ + FMGRPLR++RS
Sbjct: 201  EFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARS 260

Query: 998  KRFLREETKATIESESNA 1051
            +RF++ E K + ++E  A
Sbjct: 261  RRFVKRENKMSDQTEDVA 278


>emb|CAN61580.1| hypothetical protein VITISV_008033 [Vitis vinifera]
          Length = 294

 Score =  216 bits (549), Expect = 1e-53
 Identities = 107/198 (54%), Positives = 143/198 (72%)
 Frame = +2

Query: 458  EEEDVSNTRLLVQNVPWTCTANDIRPLLKKYGNVVHIEFAMYNKTKNRGLAFVTMGSHEE 637
            EEE+ S TRL+ QN+PWTCTA DIR L +KYG V+ +E +M+NKT+NRGLAF++MGS EE
Sbjct: 82   EEEEFSRTRLIAQNIPWTCTAQDIRSLFEKYGTVLDVELSMHNKTRNRGLAFISMGSPEE 141

Query: 638  AAAALNALDSTEFEGRLLKVNWANXXXXXXXXXXXXXXXXXVHNLFVANLPFEARAKDLK 817
            A AAL+ L+S E EGR +KVN+AN                  +NLF+ANLP++ARAKDL+
Sbjct: 142  ALAALSNLESYELEGRAIKVNYANPQKKKPSSPIQHKPVTP-YNLFIANLPYQARAKDLR 200

Query: 818  EFFNAENGKVVSAEVIFQDNPRRSAGYGFISFNTKXXXXXXXXXFEEKEFMGRPLRLSRS 997
            EFF++ N  VVSAEVIF +NPRRS+GYGF+SF +K         F+ + FMGRPLR++RS
Sbjct: 201  EFFSSGNCNVVSAEVIFHENPRRSSGYGFVSFGSKEEADTALSSFQGQMFMGRPLRVARS 260

Query: 998  KRFLREETKATIESESNA 1051
            +RF++ E K + ++E  A
Sbjct: 261  RRFVKRENKMSDQTEDVA 278


>ref|XP_002872360.1| hypothetical protein ARALYDRAFT_489706 [Arabidopsis lyrata subsp.
            lyrata] gi|297318197|gb|EFH48619.1| hypothetical protein
            ARALYDRAFT_489706 [Arabidopsis lyrata subsp. lyrata]
          Length = 300

 Score =  214 bits (544), Expect = 5e-53
 Identities = 109/216 (50%), Positives = 144/216 (66%)
 Frame = +2

Query: 410  PVVQSESTEEKIAVEPEEEDVSNTRLLVQNVPWTCTANDIRPLLKKYGNVVHIEFAMYNK 589
            PV++S S+    A E  EE++S TRL+ QNVPWT T  DIR L +KYGNV+ IE +M+ K
Sbjct: 72   PVLESSSSS---ATEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGNVIDIEMSMHKK 128

Query: 590  TKNRGLAFVTMGSHEEAAAALNALDSTEFEGRLLKVNWANXXXXXXXXXXXXXXXXXVHN 769
             +NRGL F+ M S +EAA AL +L+S ++EGR LKV++A                    N
Sbjct: 129  ERNRGLVFIEMASPDEAATALKSLESCDYEGRRLKVDYAKTKKKKTYAPREKPSPVPTFN 188

Query: 770  LFVANLPFEARAKDLKEFFNAENGKVVSAEVIFQDNPRRSAGYGFISFNTKXXXXXXXXX 949
            LFVANL FEARAK LKEFF+A+ G VVS EVIFQ+NPRRS+GYGF+SF TK         
Sbjct: 189  LFVANLAFEARAKHLKEFFDADTGNVVSTEVIFQENPRRSSGYGFVSFKTKKQAEAALIE 248

Query: 950  FEEKEFMGRPLRLSRSKRFLREETKATIESESNAEE 1057
            F+ K+FMGRP+RL++SK+F++ + K  ++     EE
Sbjct: 249  FQGKDFMGRPIRLAKSKQFVKLQAKEGLQPPEEEEE 284


>ref|NP_192643.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
            gi|38603886|gb|AAR24688.1| At4g09040 [Arabidopsis
            thaliana] gi|51968384|dbj|BAD42884.1| putative protein
            [Arabidopsis thaliana] gi|51969486|dbj|BAD43435.1|
            putative protein [Arabidopsis thaliana]
            gi|51969588|dbj|BAD43486.1| putative protein [Arabidopsis
            thaliana] gi|51970774|dbj|BAD44079.1| putative protein
            [Arabidopsis thaliana] gi|62319325|dbj|BAD94588.1|
            hypothetical protein [Arabidopsis thaliana]
            gi|332657315|gb|AEE82715.1| RNA recognition
            motif-containing protein [Arabidopsis thaliana]
          Length = 304

 Score =  211 bits (538), Expect = 3e-52
 Identities = 110/218 (50%), Positives = 146/218 (66%), Gaps = 1/218 (0%)
 Frame = +2

Query: 407  QPVVQSESTEEKIAVEPEEEDVSNTRLLVQNVPWTCTANDIRPLLKKYGNVVHIEFAMYN 586
            +PV++S S+    A E  EE++S TRL+ QNVPWT T  DIR L +KYG+V+ IE +M+ 
Sbjct: 71   EPVLESSSSSSS-APEVVEEEISKTRLIAQNVPWTSTPEDIRSLFEKYGSVIDIEMSMHK 129

Query: 587  KTKNRGLAFVTMGSHEEAAAALNALDSTEFEGRLLKVNWANXXXXXXXXXXXXXXXXXVH 766
            K +NRGL F+ M S EEAA AL +L+S E+EGR LKV++A                    
Sbjct: 130  KERNRGLVFIEMASPEEAATALKSLESCEYEGRRLKVDYAKTKKKKTYAPRETPSPVPTF 189

Query: 767  NLFVANLPFEARAKDLKEFFNAENGKVVSAEVIFQDNPRRSAGYGFISFNTKXXXXXXXX 946
            NLFVANL FEARAK LKEFF+A+ G VVS EVIF +NPRRS+GYGF+SF TK        
Sbjct: 190  NLFVANLAFEARAKHLKEFFDADTGNVVSTEVIFHENPRRSSGYGFVSFKTKKQAEAALI 249

Query: 947  XFEEKEFMGRPLRLSRSKRFLREETKATIE-SESNAEE 1057
             F+ K+F+GRP+RL++SK+F++ + K  ++  E  AEE
Sbjct: 250  EFQGKDFLGRPIRLAKSKQFVKLQAKEGLQPPEEEAEE 287


Top