BLASTX nr result

ID: Scutellaria24_contig00000971 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria24_contig00000971
         (1101 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatul...   427   e-117
ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [...   427   e-117
ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus ...   426   e-117
ref|XP_002513481.1| 40S ribosomal protein S2, putative [Ricinus ...   426   e-117
ref|XP_002308954.1| predicted protein [Populus trichocarpa] gi|1...   426   e-117

>ref|XP_003630949.1| 40S ribosomal protein S2 [Medicago truncatula]
           gi|355524971|gb|AET05425.1| 40S ribosomal protein S2
           [Medicago truncatula]
          Length = 279

 Score =  427 bits (1099), Expect = e-117
 Identities = 212/231 (91%), Positives = 224/231 (96%), Gaps = 1/231 (0%)
 Frame = -2

Query: 938 EEEKWVPVTKLGRLVRDQKIKSIEQIYLHSLPIKEYQIIDALV-PSLKDEVMKIMPVQKQ 762
           EEEKWVPVTKLGRLV++ KI+S+EQIYLHSLPIKE+QIID LV P+LKDEVMKIMPVQKQ
Sbjct: 45  EEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQ 104

Query: 761 TRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 582
           TRAGQRTRFKAFVVVGD+NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG
Sbjct: 105 TRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 164

Query: 581 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 402
           KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN
Sbjct: 165 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 224

Query: 401 FVKATFDCLLKTYGFLTPDFWKETRFTKSPFQEYTDLLAKPTAKIVHAVED 249
           FVKATFDCL+KTYGFLTP+FWKETRF+KSPFQEYTDLLAKPTAK +   E+
Sbjct: 225 FVKATFDCLMKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTAKALILEEE 275


>ref|XP_003525227.1| PREDICTED: 40S ribosomal protein S2-4-like [Glycine max]
          Length = 272

 Score =  427 bits (1097), Expect = e-117
 Identities = 212/231 (91%), Positives = 223/231 (96%), Gaps = 1/231 (0%)
 Frame = -2

Query: 938 EEEKWVPVTKLGRLVRDQKIKSIEQIYLHSLPIKEYQIIDALV-PSLKDEVMKIMPVQKQ 762
           EEEKWVPVTKLGRLV++ KI+S+EQIYLHSLPIKE+QIID LV P+LKDEVMKIMPVQKQ
Sbjct: 38  EEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPTLKDEVMKIMPVQKQ 97

Query: 761 TRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 582
           TRAGQRTRFKAFVVVGD+NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG
Sbjct: 98  TRAGQRTRFKAFVVVGDNNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 157

Query: 581 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 402
           KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN
Sbjct: 158 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 217

Query: 401 FVKATFDCLLKTYGFLTPDFWKETRFTKSPFQEYTDLLAKPTAKIVHAVED 249
           FVKATFDCLLKTYGFLTP+FWKETRF+KSPFQEYTDLLAKPT K +   E+
Sbjct: 218 FVKATFDCLLKTYGFLTPEFWKETRFSKSPFQEYTDLLAKPTGKALILEEE 268


>ref|XP_002513493.1| 40S ribosomal protein S2, putative [Ricinus communis]
           gi|223547401|gb|EEF48896.1| 40S ribosomal protein S2,
           putative [Ricinus communis]
          Length = 270

 Score =  426 bits (1094), Expect = e-117
 Identities = 211/234 (90%), Positives = 222/234 (94%), Gaps = 1/234 (0%)
 Frame = -2

Query: 938 EEEKWVPVTKLGRLVRDQKIKSIEQIYLHSLPIKEYQIIDALV-PSLKDEVMKIMPVQKQ 762
           EEEKWVPVTKLGRLV++ KI+S+EQIYLHSLPIKE+QIID LV PSLKDEVMKI PVQKQ
Sbjct: 37  EEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPSLKDEVMKITPVQKQ 96

Query: 761 TRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 582
           TRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG
Sbjct: 97  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 156

Query: 581 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 402
           KPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGN
Sbjct: 157 KPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGN 216

Query: 401 FVKATFDCLLKTYGFLTPDFWKETRFTKSPFQEYTDLLAKPTAKIVHAVEDLDA 240
           FVKATFDCLLKTYGFLTPDFW+ET FTKSPFQEYTDLL KPT  ++  VE +DA
Sbjct: 217 FVKATFDCLLKTYGFLTPDFWRETHFTKSPFQEYTDLLGKPTKVLIEDVERVDA 270


>ref|XP_002513481.1| 40S ribosomal protein S2, putative [Ricinus communis]
           gi|223547389|gb|EEF48884.1| 40S ribosomal protein S2,
           putative [Ricinus communis]
          Length = 273

 Score =  426 bits (1094), Expect = e-117
 Identities = 211/234 (90%), Positives = 222/234 (94%), Gaps = 1/234 (0%)
 Frame = -2

Query: 938 EEEKWVPVTKLGRLVRDQKIKSIEQIYLHSLPIKEYQIIDALV-PSLKDEVMKIMPVQKQ 762
           EEEKWVPVTKLGRLV++ KI+S+EQIYLHSLPIKE+QIID LV PSLKDEVMKI PVQKQ
Sbjct: 37  EEEKWVPVTKLGRLVKEGKIRSLEQIYLHSLPIKEHQIIDTLVGPSLKDEVMKITPVQKQ 96

Query: 761 TRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 582
           TRAGQRTRFKAFVVVGD NGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG
Sbjct: 97  TRAGQRTRFKAFVVVGDGNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNKIG 156

Query: 581 KPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTLGN 402
           KPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGI+DVFTSSRGSTKTLGN
Sbjct: 157 KPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIEDVFTSSRGSTKTLGN 216

Query: 401 FVKATFDCLLKTYGFLTPDFWKETRFTKSPFQEYTDLLAKPTAKIVHAVEDLDA 240
           FVKATFDCLLKTYGFLTPDFW+ET FTKSPFQEYTDLL KPT  ++  VE +DA
Sbjct: 217 FVKATFDCLLKTYGFLTPDFWRETHFTKSPFQEYTDLLGKPTKVLIEDVERVDA 270


>ref|XP_002308954.1| predicted protein [Populus trichocarpa] gi|118485149|gb|ABK94437.1|
           unknown [Populus trichocarpa]
           gi|222854930|gb|EEE92477.1| predicted protein [Populus
           trichocarpa]
          Length = 270

 Score =  426 bits (1094), Expect = e-117
 Identities = 209/230 (90%), Positives = 221/230 (96%), Gaps = 1/230 (0%)
 Frame = -2

Query: 944 ESEEEKWVPVTKLGRLVRDQKIKSIEQIYLHSLPIKEYQIIDALV-PSLKDEVMKIMPVQ 768
           + EEEKWVPVTKLGRLV+D KI S+EQIYLHSLPIKEYQIID L+ P+LKDEVMKI PVQ
Sbjct: 36  KEEEEKWVPVTKLGRLVKDGKISSVEQIYLHSLPIKEYQIIDTLIGPALKDEVMKITPVQ 95

Query: 767 KQTRAGQRTRFKAFVVVGDSNGHVGLGVKCSKEVATAIRGAIILAKLSVIPVRRGYWGNK 588
           KQTRAGQRTRFKAFVVVGD NGHVGLGVKC+KEVATAIRGAIILAKLS+IPVRRGYWGNK
Sbjct: 96  KQTRAGQRTRFKAFVVVGDCNGHVGLGVKCAKEVATAIRGAIILAKLSIIPVRRGYWGNK 155

Query: 587 IGKPHTVPCKVTGKCGSVTVRMVPAPRGSGIVAARVPKKVLQFAGIDDVFTSSRGSTKTL 408
           IGKPHTVPCKVTGKCGSVTVRMVPAPRG+GIVAARVPKKVLQFAGIDDVFTSSRGSTKTL
Sbjct: 156 IGKPHTVPCKVTGKCGSVTVRMVPAPRGAGIVAARVPKKVLQFAGIDDVFTSSRGSTKTL 215

Query: 407 GNFVKATFDCLLKTYGFLTPDFWKETRFTKSPFQEYTDLLAKPTAKIVHA 258
           GNFVKATFDCLLKTYGFLTPDFWKETRF +SPFQEYTDLLAKPT+K++ A
Sbjct: 216 GNFVKATFDCLLKTYGFLTPDFWKETRFIRSPFQEYTDLLAKPTSKVLIA 265


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